RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 SIGIRRQ6IA17 410 aa10.53□□□□□ -0.72
COL18A1-206ENST00000459895 SFXN4Q6P4A7 337 aa10.53□□□□□ -0.72
COL18A1-206ENST00000459895 OR2W3Q7Z3T1 314 aa10.53□□□□□ -0.72
COL18A1-206ENST00000459895 PPP1R35Q8TAP8 253 aa10.53□□□□□ -0.72
COL18A1-206ENST00000459895 FAM3DQ96BQ1 224 aa10.53□□□□□ -0.72
COL18A1-206ENST00000459895 MRPS24Q96EL2 167 aaKnown RBP10.53□□□□□ -0.72
COL18A1-206ENST00000459895 LIN7BQ9HAP6 207 aa10.53□□□□□ -0.72
COL18A1-206ENST00000459895 PCDHB16Q9NRJ7 776 aa10.53□□□□□ -0.72
COL18A1-206ENST00000459895 KIF25Q9UIL4 384 aa10.53□□□□□ -0.72
COL18A1-206ENST00000459895 LINC00312Q9Y6C7 94 aa10.53□□□□□ -0.72
COL18A1-206ENST00000459895 NIPBLQ6KC79 2804 aaeCLIP10.52□□□□□ -0.73
COL18A1-206ENST00000459895 ODAMA1E959 279 aa10.52□□□□□ -0.73
COL18A1-206ENST00000459895 FAM90A10PA6NDY2 464 aa10.52□□□□□ -0.73
COL18A1-206ENST00000459895 FAM90A18PA6NE21 464 aa10.52□□□□□ -0.73
COL18A1-206ENST00000459895 FAM90A16PA6NEW6 464 aa10.52□□□□□ -0.73
COL18A1-206ENST00000459895 FAM90A20PA6NIJ5 464 aa10.52□□□□□ -0.73
COL18A1-206ENST00000459895 FAM90A8PA6NJQ4 464 aa10.52□□□□□ -0.73
COL18A1-206ENST00000459895 FAM90A7PA6NKC0 464 aa10.52□□□□□ -0.73
COL18A1-206ENST00000459895 NOTOA8MTQ0 251 aa10.52□□□□□ -0.73
COL18A1-206ENST00000459895 FAM90A22PA8MWA6 464 aa10.52□□□□□ -0.73
COL18A1-206ENST00000459895 FAM90A12PA8MX19 464 aa10.52□□□□□ -0.73
COL18A1-206ENST00000459895 FAM90A5PA8MXJ8 464 aa10.52□□□□□ -0.73
COL18A1-206ENST00000459895 FAM90A23PA8MXZ1 464 aa10.52□□□□□ -0.73
COL18A1-206ENST00000459895 PDCD6O75340 191 aa10.52□□□□□ -0.73
COL18A1-206ENST00000459895 CLPXO76031 633 aa10.52□□□□□ -0.73
COL18A1-206ENST00000459895 FAM90A15PP0C7V4 464 aa10.52□□□□□ -0.73
COL18A1-206ENST00000459895 FAM90A13PP0C7W8 464 aa10.52□□□□□ -0.73
COL18A1-206ENST00000459895 FAM90A14PP0C7W9 464 aa10.52□□□□□ -0.73
COL18A1-206ENST00000459895 FAM90A24PP0C7X0 464 aa10.52□□□□□ -0.73
COL18A1-206ENST00000459895 CHATP28329 748 aa10.52□□□□□ -0.73
COL18A1-206ENST00000459895 ERP29P30040 261 aaKnown RBP10.52□□□□□ -0.73
COL18A1-206ENST00000459895 EFNB2P52799 333 aa10.52□□□□□ -0.73
COL18A1-206ENST00000459895 NKAPLQ5M9Q1 402 aa10.52□□□□□ -0.73
COL18A1-206ENST00000459895 RAB12Q6IQ22 244 aa10.52□□□□□ -0.73
COL18A1-206ENST00000459895 BRICD5Q6PL45 260 aa10.52□□□□□ -0.73
COL18A1-206ENST00000459895 BRD3OSQ6XYD6 125 aa10.52□□□□□ -0.73
COL18A1-206ENST00000459895 ZNF782Q6ZMW2 699 aaPredicted RBP10.52□□□□□ -0.73
COL18A1-206ENST00000459895 TRAPPC6BQ86SZ2 158 aa10.52□□□□□ -0.73
COL18A1-206ENST00000459895 TPRA1Q86W33 373 aa10.52□□□□□ -0.73
COL18A1-206ENST00000459895 PDZD9Q8IXQ8 264 aa10.52□□□□□ -0.73
COL18A1-206ENST00000459895 CMTM4Q8IZR5 234 aa10.52□□□□□ -0.73
COL18A1-206ENST00000459895 OR5D13Q8NGL4 314 aa10.52□□□□□ -0.73
COL18A1-206ENST00000459895 KCNG3Q8TAE7 436 aa10.52□□□□□ -0.73
COL18A1-206ENST00000459895 NANPQ8TBE9 248 aa10.52□□□□□ -0.73
COL18A1-206ENST00000459895 LGALS14Q8TCE9 139 aa10.52□□□□□ -0.73
COL18A1-206ENST00000459895 NEK7Q8TDX7 302 aa10.52□□□□□ -0.73
COL18A1-206ENST00000459895 LHX4Q969G2 390 aa10.52□□□□□ -0.73
COL18A1-206ENST00000459895 ZNF714Q96N38 554 aa10.52□□□□□ -0.73
COL18A1-206ENST00000459895 SLC6A7Q99884 636 aa10.52□□□□□ -0.73
COL18A1-206ENST00000459895 TM2D1Q9BX74 207 aa10.52□□□□□ -0.73
COL18A1-206ENST00000459895 LPAR5Q9H1C0 372 aa10.52□□□□□ -0.73
COL18A1-206ENST00000459895 hADV38S2A0JD32 116 aa10.51□□□□□ -0.73
COL18A1-206ENST00000459895 RNASEK-C17orf49H0YIS7 233 aa10.51□□□□□ -0.73
COL18A1-206ENST00000459895 PSMD7P51665 324 aa10.51□□□□□ -0.73
COL18A1-206ENST00000459895 ERVFRD-1P60508 538 aa10.51□□□□□ -0.73
COL18A1-206ENST00000459895 PAX5Q02548 391 aa10.51□□□□□ -0.73
COL18A1-206ENST00000459895 MEF2CQ06413 473 aaPredicted RBP10.51□□□□□ -0.73
COL18A1-206ENST00000459895 PRAMEF5Q5TYX0 476 aa10.51□□□□□ -0.73
COL18A1-206ENST00000459895 GDPGP1Q6ZNW5 385 aa10.51□□□□□ -0.73
COL18A1-206ENST00000459895 PNKDQ8N490 385 aa10.51□□□□□ -0.73
COL18A1-206ENST00000459895 TEX29Q8N6K0 151 aa10.51□□□□□ -0.73
COL18A1-206ENST00000459895 OR13A1Q8NGR1 328 aa10.51□□□□□ -0.73
COL18A1-206ENST00000459895 C22orf15Q8WYQ4 148 aa10.51□□□□□ -0.73
COL18A1-206ENST00000459895 TNFRSF14Q92956 283 aa10.51□□□□□ -0.73
COL18A1-206ENST00000459895 DMRTB1Q96MA1 342 aa10.51□□□□□ -0.73
COL18A1-206ENST00000459895 METTL8Q9H825 291 aaKnown RBP10.51□□□□□ -0.73
COL18A1-206ENST00000459895 SPACA1Q9HBV2 294 aa10.51□□□□□ -0.73
COL18A1-206ENST00000459895 FBLN5Q9UBX5 448 aa10.51□□□□□ -0.73
COL18A1-206ENST00000459895 ZNF69Q9UC07 566 aa10.51□□□□□ -0.73
COL18A1-206ENST00000459895 DAPK2Q9UIK4 370 aa10.51□□□□□ -0.73
COL18A1-206ENST00000459895 SOX21Q9Y651 276 aaPredicted RBP10.51□□□□□ -0.73
COL18A1-206ENST00000459895 SETD2Q9BYW2 2564 aaPredicted RBP10.5□□□□□ -0.73
COL18A1-206ENST00000459895 MEIKINA0A087WXM9 373 aa10.5□□□□□ -0.73
COL18A1-206ENST00000459895 TRGV10A0A0A0MS01 117 aa10.5□□□□□ -0.73
COL18A1-206ENST00000459895 TRAV39A0A0B4J263 110 aa10.5□□□□□ -0.73
COL18A1-206ENST00000459895 CENPVL3A0A0U1RRI6 287 aa10.5□□□□□ -0.73
COL18A1-206ENST00000459895 MDFIC2A0A1B0GVS7 189 aa10.5□□□□□ -0.73
COL18A1-206ENST00000459895 A0A1W2PPH5 198 aa10.5□□□□□ -0.73
COL18A1-206ENST00000459895 FOXI3A8MTJ6 420 aaPredicted RBP10.5□□□□□ -0.73
COL18A1-206ENST00000459895 ZNF728P0DKX0 622 aa10.5□□□□□ -0.73
COL18A1-206ENST00000459895 SNRPBP14678 240 aaKnown RBP10.5□□□□□ -0.73
COL18A1-206ENST00000459895 SSTR5P35346 364 aa10.5□□□□□ -0.73
COL18A1-206ENST00000459895 KCNJ3P48549 501 aa10.5□□□□□ -0.73
COL18A1-206ENST00000459895 VBP1P61758 197 aa10.5□□□□□ -0.73
COL18A1-206ENST00000459895 GPR157Q5UAW9 335 aa10.5□□□□□ -0.73
COL18A1-206ENST00000459895 GPR107Q5VW38 600 aa10.5□□□□□ -0.73
COL18A1-206ENST00000459895 HCP5Q6MZN7 132 aa10.5□□□□□ -0.73
COL18A1-206ENST00000459895 GPR141Q7Z602 305 aa10.5□□□□□ -0.73
COL18A1-206ENST00000459895 C11orf42Q8N5U0 333 aa10.5□□□□□ -0.73
COL18A1-206ENST00000459895 SULT4A1Q9BR01 284 aa10.5□□□□□ -0.73
COL18A1-206ENST00000459895 NUP50Q9UKX7 468 aa10.5□□□□□ -0.73
COL18A1-206ENST00000459895 UBE2J1Q9Y385 318 aaPredicted RBP10.5□□□□□ -0.73
COL18A1-206ENST00000459895 IGHV1-69DA0A0B4J2H0 117 aa10.49□□□□□ -0.73
COL18A1-206ENST00000459895 A0A1W2PRD5 423 aa10.49□□□□□ -0.73
COL18A1-206ENST00000459895 A0A1W2PRF3 423 aa10.49□□□□□ -0.73
COL18A1-206ENST00000459895 A0A1W2PRM7 423 aa10.49□□□□□ -0.73
COL18A1-206ENST00000459895 TMEM30CPA0ZSE6 113 aa10.49□□□□□ -0.73
COL18A1-206ENST00000459895 FUOMA2VDF0 154 aa10.49□□□□□ -0.73
COL18A1-206ENST00000459895 C17orf98A8MV24 154 aa10.49□□□□□ -0.73
COL18A1-206ENST00000459895 SOCS1O15524 211 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms