RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 PYY3Q5JQD4 70 aa7.36□□□□□ -1.23
VPS50-208ENST00000458707 PHYHD1Q5SRE7 291 aa7.36□□□□□ -1.23
VPS50-208ENST00000458707 TSPO2Q5TGU0 170 aa7.36□□□□□ -1.23
VPS50-208ENST00000458707 MRPL52Q86TS9 123 aaKnown RBP7.36□□□□□ -1.23
VPS50-208ENST00000458707 MCEMP1Q8IX19 187 aa7.36□□□□□ -1.23
VPS50-208ENST00000458707 OR2C3Q8N628 320 aa7.36□□□□□ -1.23
VPS50-208ENST00000458707 CCDC71LQ8N9Z2 235 aa7.36□□□□□ -1.23
VPS50-208ENST00000458707 OR10G3Q8NGC4 313 aa7.36□□□□□ -1.23
VPS50-208ENST00000458707 ZNF799Q96GE5 643 aa7.36□□□□□ -1.23
VPS50-208ENST00000458707 NOL4LQ96MY1 436 aaPredicted RBP7.36□□□□□ -1.23
VPS50-208ENST00000458707 NDUFAF3Q9BU61 184 aa7.36□□□□□ -1.23
VPS50-208ENST00000458707 FGF21Q9NSA1 209 aa7.36□□□□□ -1.23
VPS50-208ENST00000458707 PARPBPQ9NWS1 579 aa7.36□□□□□ -1.23
VPS50-208ENST00000458707 NXT1Q9UKK6 140 aaKnown RBP7.36□□□□□ -1.23
VPS50-208ENST00000458707 PTRH2Q9Y3E5 179 aaKnown RBP7.36□□□□□ -1.23
VPS50-208ENST00000458707 PUS1Q9Y606 427 aaKnown RBP eCLIP7.36□□□□□ -1.23
VPS50-208ENST00000458707 IGKV1-27A0A075B6S5 117 aa7.35□□□□□ -1.23
VPS50-208ENST00000458707 LNP1A1A4G5 178 aa7.35□□□□□ -1.23
VPS50-208ENST00000458707 ZNF732B4DXR9 585 aa7.35□□□□□ -1.23
VPS50-208ENST00000458707 TRDCB7Z8K6 153 aa7.35□□□□□ -1.23
VPS50-208ENST00000458707 YIF1AO95070 293 aa7.35□□□□□ -1.23
VPS50-208ENST00000458707 GOSR1O95249 250 aa7.35□□□□□ -1.23
VPS50-208ENST00000458707 KLK2P20151 261 aa7.35□□□□□ -1.23
VPS50-208ENST00000458707 ATP6V0CP27449 155 aa7.35□□□□□ -1.23
VPS50-208ENST00000458707 GUCA1AP43080 201 aaPredicted RBP7.35□□□□□ -1.23
VPS50-208ENST00000458707 RPS10P46783 165 aaKnown RBP7.35□□□□□ -1.23
VPS50-208ENST00000458707 RND3P61587 244 aa7.35□□□□□ -1.23
VPS50-208ENST00000458707 CCL20P78556 96 aa7.35□□□□□ -1.23
VPS50-208ENST00000458707 SHBQ15464 509 aa7.35□□□□□ -1.23
VPS50-208ENST00000458707 OR8B8Q15620 311 aa7.35□□□□□ -1.23
VPS50-208ENST00000458707 TAF9Q16594 264 aa7.35□□□□□ -1.23
VPS50-208ENST00000458707 TMEM176BQ3YBM2 270 aaPredicted RBP7.35□□□□□ -1.23
VPS50-208ENST00000458707 PHLDA2Q53GA4 152 aa7.35□□□□□ -1.23
VPS50-208ENST00000458707 Q6ZS52 159 aa7.35□□□□□ -1.23
VPS50-208ENST00000458707 SYT13Q7L8C5 426 aa7.35□□□□□ -1.23
VPS50-208ENST00000458707 FAM185AQ8N0U4 392 aa7.35□□□□□ -1.23
VPS50-208ENST00000458707 SLC35G3Q8N808 338 aa7.35□□□□□ -1.23
VPS50-208ENST00000458707 OR5L1Q8NGL2 311 aa7.35□□□□□ -1.23
VPS50-208ENST00000458707 OR13D1Q8NGV5 346 aa7.35□□□□□ -1.23
VPS50-208ENST00000458707 OR2G3Q8NGZ4 309 aa7.35□□□□□ -1.23
VPS50-208ENST00000458707 OR14L1PQ8NHC6 308 aa7.35□□□□□ -1.23
VPS50-208ENST00000458707 MRGPRDQ8TDS7 321 aa7.35□□□□□ -1.23
VPS50-208ENST00000458707 RLN3Q8WXF3 142 aa7.35□□□□□ -1.23
VPS50-208ENST00000458707 RAB39BQ96DA2 213 aa7.35□□□□□ -1.23
VPS50-208ENST00000458707 REEP6Q96HR9 211 aa7.35□□□□□ -1.23
VPS50-208ENST00000458707 METTL7AQ9H8H3 244 aa7.35□□□□□ -1.23
VPS50-208ENST00000458707 ZNF286AQ9HBT8 521 aa7.35□□□□□ -1.23
VPS50-208ENST00000458707 GPR173Q9NS66 373 aa7.35□□□□□ -1.23
VPS50-208ENST00000458707 GAR1Q9NY12 217 aaKnown RBP7.35□□□□□ -1.23
VPS50-208ENST00000458707 IL36GQ9NZH8 169 aa7.35□□□□□ -1.23
VPS50-208ENST00000458707 DOK5Q9P104 306 aa7.35□□□□□ -1.23
VPS50-208ENST00000458707 MYOTQ9UBF9 498 aa7.35□□□□□ -1.23
VPS50-208ENST00000458707 BRWD1Q9NSI6 2320 aa7.35□□□□□ -1.23
VPS50-208ENST00000458707 NCKAP5O14513 1909 aa7.35□□□□□ -1.23
VPS50-208ENST00000458707 TNRC6AQ8NDV7 1962 aaKnown RBP7.34□□□□□ -1.23
VPS50-208ENST00000458707 IGSF23A1L1A6 192 aa7.34□□□□□ -1.23
VPS50-208ENST00000458707 PHF1O43189 567 aaPredicted RBP7.34□□□□□ -1.23
VPS50-208ENST00000458707 HSPB1P04792 205 aaKnown RBP7.34□□□□□ -1.23
VPS50-208ENST00000458707 CEACAM1P13688 526 aa7.34□□□□□ -1.23
VPS50-208ENST00000458707 PNLIPP16233 465 aa7.34□□□□□ -1.23
VPS50-208ENST00000458707 ZNF25P17030 456 aaPredicted RBP7.34□□□□□ -1.23
VPS50-208ENST00000458707 CRYGSP22914 178 aa7.34□□□□□ -1.23
VPS50-208ENST00000458707 FXYD4P59646 89 aa7.34□□□□□ -1.23
VPS50-208ENST00000458707 ICAM4Q14773 271 aa7.34□□□□□ -1.23
VPS50-208ENST00000458707 CNN3Q15417 329 aaKnown RBP7.34□□□□□ -1.23
VPS50-208ENST00000458707 EXT1Q16394 746 aa7.34□□□□□ -1.23
VPS50-208ENST00000458707 SNAI3Q3KNW1 292 aa7.34□□□□□ -1.23
VPS50-208ENST00000458707 ZNF506Q5JVG8 444 aa7.34□□□□□ -1.23
VPS50-208ENST00000458707 DCAF10Q5QP82 559 aa7.34□□□□□ -1.23
VPS50-208ENST00000458707 TMEM42Q69YG0 159 aa7.34□□□□□ -1.23
VPS50-208ENST00000458707 WDR74Q6RFH5 385 aaPredicted RBP7.34□□□□□ -1.23
VPS50-208ENST00000458707 SLC22A25Q6T423 547 aa7.34□□□□□ -1.23
VPS50-208ENST00000458707 LHFPL2Q6ZUX7 228 aa7.34□□□□□ -1.23
VPS50-208ENST00000458707 SMIM15Q7Z3B0 74 aa7.34□□□□□ -1.23
VPS50-208ENST00000458707 TMEM123Q8N131 208 aa7.34□□□□□ -1.23
VPS50-208ENST00000458707 ZNF610Q8N9Z0 462 aa7.34□□□□□ -1.23
VPS50-208ENST00000458707 OR10AD1Q8NGE0 317 aa7.34□□□□□ -1.23
VPS50-208ENST00000458707 OR11L1Q8NGX0 322 aa7.34□□□□□ -1.23
VPS50-208ENST00000458707 Q8WTZ3 238 aa7.34□□□□□ -1.23
VPS50-208ENST00000458707 SPTSSAQ969W0 71 aa7.34□□□□□ -1.23
VPS50-208ENST00000458707 TMEM56Q96MV1 263 aa7.34□□□□□ -1.23
VPS50-208ENST00000458707 TP53RKQ96S44 253 aa7.34□□□□□ -1.23
VPS50-208ENST00000458707 TMEM208Q9BTX3 173 aa7.34□□□□□ -1.23
VPS50-208ENST00000458707 TMEM222Q9H0R3 208 aa7.34□□□□□ -1.23
VPS50-208ENST00000458707 PLEKHF2Q9H8W4 249 aa7.34□□□□□ -1.23
VPS50-208ENST00000458707 LYRM2Q9NU23 88 aaPredicted RBP7.34□□□□□ -1.23
VPS50-208ENST00000458707 ZNF581Q9P0T4 197 aa7.34□□□□□ -1.23
VPS50-208ENST00000458707 FOXD3Q9UJU5 478 aaPredicted RBP7.34□□□□□ -1.23
VPS50-208ENST00000458707 MTCH2Q9Y6C9 303 aa7.34□□□□□ -1.23
VPS50-208ENST00000458707 TMEM56-RWDD3S4R434 201 aa7.34□□□□□ -1.23
VPS50-208ENST00000458707 CHD3Q12873 2000 aaKnown RBP7.34□□□□□ -1.23
VPS50-208ENST00000458707 ELOA3CA0A087WX78 387 aaPredicted RBP7.34□□□□□ -1.23
VPS50-208ENST00000458707 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.34□□□□□ -1.23
VPS50-208ENST00000458707 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.34□□□□□ -1.23
VPS50-208ENST00000458707 FAM230AA0A1W2PPH8 454 aa7.34□□□□□ -1.23
VPS50-208ENST00000458707 MED19A0JLT2 244 aaPredicted RBP7.34□□□□□ -1.23
VPS50-208ENST00000458707 CLEC18AA5D8T8 446 aa7.34□□□□□ -1.23
VPS50-208ENST00000458707 NKX2-6A6NCS4 301 aa7.34□□□□□ -1.23
VPS50-208ENST00000458707 FAM24AA6NFZ4 105 aa7.34□□□□□ -1.23
VPS50-208ENST00000458707 ZNF724A8MTY0 619 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms