RNA–Protein interactions for RNA: ENST00000458188.2

CLTCL1-204, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-204ENST00000458188 MIXL1Q9H2W2 232 aa7.18□□□□□ -1.26
CLTCL1-204ENST00000458188 PLEKHJ1Q9NW61 149 aa7.18□□□□□ -1.26
CLTCL1-204ENST00000458188 RHBDL2Q9NX52 303 aa7.18□□□□□ -1.26
CLTCL1-204ENST00000458188 ETAA1Q9NY74 926 aa7.18□□□□□ -1.26
CLTCL1-204ENST00000458188 FBLN5Q9UBX5 448 aa7.18□□□□□ -1.26
CLTCL1-204ENST00000458188 MRPS7Q9Y2R9 242 aaKnown RBP7.18□□□□□ -1.26
CLTCL1-204ENST00000458188 ARID1AO14497 2285 aa7.18□□□□□ -1.26
CLTCL1-204ENST00000458188 MEIKINA0A087WXM9 373 aa7.17□□□□□ -1.26
CLTCL1-204ENST00000458188 A0A1W2PQ09 198 aa7.17□□□□□ -1.26
CLTCL1-204ENST00000458188 METTL21EPA6NDL7 271 aa7.17□□□□□ -1.26
CLTCL1-204ENST00000458188 FOXI3A8MTJ6 420 aaPredicted RBP7.17□□□□□ -1.26
CLTCL1-204ENST00000458188 MCRIP1C9JLW8 97 aa7.17□□□□□ -1.26
CLTCL1-204ENST00000458188 ZNF701M0R085 212 aaPredicted RBP7.17□□□□□ -1.26
CLTCL1-204ENST00000458188 PDCD6O75340 191 aa7.17□□□□□ -1.26
CLTCL1-204ENST00000458188 HEXAP06865 529 aa7.17□□□□□ -1.26
CLTCL1-204ENST00000458188 CCL3L1P16619 93 aa7.17□□□□□ -1.26
CLTCL1-204ENST00000458188 RAB6AP20340 208 aa7.17□□□□□ -1.26
CLTCL1-204ENST00000458188 CDK2P24941 298 aa7.17□□□□□ -1.26
CLTCL1-204ENST00000458188 CHATP28329 748 aa7.17□□□□□ -1.26
CLTCL1-204ENST00000458188 ARF6P62330 175 aa7.17□□□□□ -1.26
CLTCL1-204ENST00000458188 RPL31P62899 125 aaKnown RBP7.17□□□□□ -1.26
CLTCL1-204ENST00000458188 ZNF273Q14593 569 aa7.17□□□□□ -1.26
CLTCL1-204ENST00000458188 CNPY1Q3B7I2 92 aa7.17□□□□□ -1.26
CLTCL1-204ENST00000458188 CDNFQ49AH0 187 aa7.17□□□□□ -1.26
CLTCL1-204ENST00000458188 TMEM200BQ69YZ2 307 aa7.17□□□□□ -1.26
CLTCL1-204ENST00000458188 CYB5R2Q6BCY4 276 aa7.17□□□□□ -1.26
CLTCL1-204ENST00000458188 MZT2AQ6P582 158 aa7.17□□□□□ -1.26
CLTCL1-204ENST00000458188 LINC01356Q8N9X3 169 aa7.17□□□□□ -1.26
CLTCL1-204ENST00000458188 OR56B1Q8NGI3 324 aa7.17□□□□□ -1.26
CLTCL1-204ENST00000458188 OR4K15Q8NH41 348 aa7.17□□□□□ -1.26
CLTCL1-204ENST00000458188 PPP1R35Q8TAP8 253 aa7.17□□□□□ -1.26
CLTCL1-204ENST00000458188 SETD6Q8TBK2 473 aa7.17□□□□□ -1.26
CLTCL1-204ENST00000458188 AP3S1Q92572 193 aa7.17□□□□□ -1.26
CLTCL1-204ENST00000458188 RAB3CQ96E17 227 aa7.17□□□□□ -1.26
CLTCL1-204ENST00000458188 COX4I2Q96KJ9 171 aa7.17□□□□□ -1.26
CLTCL1-204ENST00000458188 NUDT16L1Q9BRJ7 211 aaKnown RBP7.17□□□□□ -1.26
CLTCL1-204ENST00000458188 HIF1ANQ9NWT6 349 aa7.17□□□□□ -1.26
CLTCL1-204ENST00000458188 CCDC59Q9P031 241 aaKnown RBP7.17□□□□□ -1.26
CLTCL1-204ENST00000458188 RCC2Q9P258 522 aaKnown RBP7.17□□□□□ -1.26
CLTCL1-204ENST00000458188 AK3Q9UIJ7 227 aa7.17□□□□□ -1.26
CLTCL1-204ENST00000458188 KIF25Q9UIL4 384 aa7.17□□□□□ -1.26
CLTCL1-204ENST00000458188 KCNK7Q9Y2U2 307 aa7.17□□□□□ -1.26
CLTCL1-204ENST00000458188 ETV7Q9Y603 341 aa7.17□□□□□ -1.26
CLTCL1-204ENST00000458188 FN1P02751 2386 aaKnown RBP7.17□□□□□ -1.26
CLTCL1-204ENST00000458188 NSD1Q96L73 2696 aaPredicted RBP7.16□□□□□ -1.26
CLTCL1-204ENST00000458188 PPIAL4CA0A0B4J2A2 164 aa7.16□□□□□ -1.26
CLTCL1-204ENST00000458188 MEIS3P1A6NDR6 274 aa7.16□□□□□ -1.26
CLTCL1-204ENST00000458188 FAM90A10PA6NDY2 464 aa7.16□□□□□ -1.26
CLTCL1-204ENST00000458188 FAM90A18PA6NE21 464 aa7.16□□□□□ -1.26
CLTCL1-204ENST00000458188 FAM90A16PA6NEW6 464 aa7.16□□□□□ -1.26
CLTCL1-204ENST00000458188 TMEM235A6NFC5 223 aa7.16□□□□□ -1.26
CLTCL1-204ENST00000458188 FAM90A20PA6NIJ5 464 aa7.16□□□□□ -1.26
CLTCL1-204ENST00000458188 FAM90A8PA6NJQ4 464 aa7.16□□□□□ -1.26
CLTCL1-204ENST00000458188 FAM90A7PA6NKC0 464 aa7.16□□□□□ -1.26
CLTCL1-204ENST00000458188 FAM90A22PA8MWA6 464 aa7.16□□□□□ -1.26
CLTCL1-204ENST00000458188 FAM90A12PA8MX19 464 aa7.16□□□□□ -1.26
CLTCL1-204ENST00000458188 FAM90A5PA8MXJ8 464 aa7.16□□□□□ -1.26
CLTCL1-204ENST00000458188 FAM90A23PA8MXZ1 464 aa7.16□□□□□ -1.26
CLTCL1-204ENST00000458188 B4DSR2 109 aa7.16□□□□□ -1.26
CLTCL1-204ENST00000458188 MGST3O14880 152 aa7.16□□□□□ -1.26
CLTCL1-204ENST00000458188 FOXH1O75593 365 aa7.16□□□□□ -1.26
CLTCL1-204ENST00000458188 LY6G6DO95868 133 aa7.16□□□□□ -1.26
CLTCL1-204ENST00000458188 MT-ND4P03905 459 aa7.16□□□□□ -1.26
CLTCL1-204ENST00000458188 MSMBP08118 114 aa7.16□□□□□ -1.26
CLTCL1-204ENST00000458188 INHBBP09529 407 aa7.16□□□□□ -1.26
CLTCL1-204ENST00000458188 FAM90A15PP0C7V4 464 aa7.16□□□□□ -1.26
CLTCL1-204ENST00000458188 FAM90A13PP0C7W8 464 aa7.16□□□□□ -1.26
CLTCL1-204ENST00000458188 FAM90A14PP0C7W9 464 aa7.16□□□□□ -1.26
CLTCL1-204ENST00000458188 FAM90A24PP0C7X0 464 aa7.16□□□□□ -1.26
CLTCL1-204ENST00000458188 PPIAL4GP0DN37 164 aa7.16□□□□□ -1.26
CLTCL1-204ENST00000458188 NPY4RP50391 375 aa7.16□□□□□ -1.26
CLTCL1-204ENST00000458188 P2RX3P56373 397 aa7.16□□□□□ -1.26
CLTCL1-204ENST00000458188 KRTAP1-1Q07627 177 aa7.16□□□□□ -1.26
CLTCL1-204ENST00000458188 LTC4SQ16873 150 aa7.16□□□□□ -1.26
CLTCL1-204ENST00000458188 RNASE12Q5GAN4 147 aaKnown RBP7.16□□□□□ -1.26
CLTCL1-204ENST00000458188 UBE2NLQ5JXB2 153 aa7.16□□□□□ -1.26
CLTCL1-204ENST00000458188 RSBN1Q5VWQ0 802 aaPredicted RBP7.16□□□□□ -1.26
CLTCL1-204ENST00000458188 TRAPPC6BQ86SZ2 158 aa7.16□□□□□ -1.26
CLTCL1-204ENST00000458188 LINC00596Q86U02 117 aa7.16□□□□□ -1.26
CLTCL1-204ENST00000458188 LAX1Q8IWV1 398 aa7.16□□□□□ -1.26
CLTCL1-204ENST00000458188 PDZD9Q8IXQ8 264 aa7.16□□□□□ -1.26
CLTCL1-204ENST00000458188 OR5D13Q8NGL4 314 aa7.16□□□□□ -1.26
CLTCL1-204ENST00000458188 OR13A1Q8NGR1 328 aa7.16□□□□□ -1.26
CLTCL1-204ENST00000458188 MRGPRDQ8TDS7 321 aa7.16□□□□□ -1.26
CLTCL1-204ENST00000458188 RAB40AQ8WXH6 277 aa7.16□□□□□ -1.26
CLTCL1-204ENST00000458188 ACOT12Q8WYK0 555 aa7.16□□□□□ -1.26
CLTCL1-204ENST00000458188 MAFIPQ8WZ33 124 aa7.16□□□□□ -1.26
CLTCL1-204ENST00000458188 GCDHQ92947 438 aaPredicted RBP7.16□□□□□ -1.26
CLTCL1-204ENST00000458188 PTX4Q96A99 478 aa7.16□□□□□ -1.26
CLTCL1-204ENST00000458188 PHF21AQ96BD5 680 aa7.16□□□□□ -1.26
CLTCL1-204ENST00000458188 KCTD12Q96CX2 325 aaKnown RBP7.16□□□□□ -1.26
CLTCL1-204ENST00000458188 S100A16Q96FQ6 103 aaKnown RBP7.16□□□□□ -1.26
CLTCL1-204ENST00000458188 C1orf159Q96HA4 380 aa7.16□□□□□ -1.26
CLTCL1-204ENST00000458188 FAM234AQ9H0X4 552 aa7.16□□□□□ -1.26
CLTCL1-204ENST00000458188 IFT22Q9H7X7 185 aa7.16□□□□□ -1.26
CLTCL1-204ENST00000458188 SEBOXQ9HB31 216 aaPredicted RBP7.16□□□□□ -1.26
CLTCL1-204ENST00000458188 CHMP1AQ9HD42 196 aaPredicted RBP7.16□□□□□ -1.26
CLTCL1-204ENST00000458188 BATF3Q9NR55 127 aa7.16□□□□□ -1.26
CLTCL1-204ENST00000458188 YAE1D1Q9NRH1 226 aa7.16□□□□□ -1.26
CLTCL1-204ENST00000458188 ONECUT1Q9UBC0 465 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms