RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 PHYHIPLQ96FC7 376 aa17.3■□□□□ 0.36
SNX27-204ENST00000458013 RABAC1Q9UI14 185 aa17.3■□□□□ 0.36
SNX27-204ENST00000458013 RGS13O14921 159 aa17.3■□□□□ 0.36
SNX27-204ENST00000458013 PAGE4O60829 102 aa17.3■□□□□ 0.36
SNX27-204ENST00000458013 IER3P46695 156 aa17.3■□□□□ 0.36
SNX27-204ENST00000458013 ID4P47928 161 aa17.3■□□□□ 0.36
SNX27-204ENST00000458013 RASL11BQ9BPW5 248 aa17.3■□□□□ 0.36
SNX27-204ENST00000458013 PATE3B3GLJ2 98 aa17.3■□□□□ 0.36
SNX27-204ENST00000458013 IL13RA2Q14627 380 aa17.3■□□□□ 0.36
SNX27-204ENST00000458013 LYZL2Q7Z4W2 148 aa17.3■□□□□ 0.36
SNX27-204ENST00000458013 VN1R4Q7Z5H5 301 aa17.3■□□□□ 0.36
SNX27-204ENST00000458013 FKBP11Q9NYL4 201 aa17.3■□□□□ 0.36
SNX27-204ENST00000458013 TTC3P53804 2025 aa17.3■□□□□ 0.36
SNX27-204ENST00000458013 NKX2-6A6NCS4 301 aa17.29■□□□□ 0.36
SNX27-204ENST00000458013 TUBAL3A6NHL2 446 aa17.29■□□□□ 0.36
SNX27-204ENST00000458013 LRRC75AQ8NAA5 344 aa17.29■□□□□ 0.36
SNX27-204ENST00000458013 RPS4Y1P22090 263 aaKnown RBP17.29■□□□□ 0.36
SNX27-204ENST00000458013 OR8B3Q8NGG8 313 aa17.29■□□□□ 0.36
SNX27-204ENST00000458013 NEIL1Q96FI4 390 aaPredicted RBP17.29■□□□□ 0.36
SNX27-204ENST00000458013 OR8B2Q96RD0 313 aa17.29■□□□□ 0.36
SNX27-204ENST00000458013 MFNGO00587 321 aa17.29■□□□□ 0.36
SNX27-204ENST00000458013 LANCL1O43813 399 aa17.29■□□□□ 0.36
SNX27-204ENST00000458013 DGAT2L7PQ6IED9 249 aa17.29■□□□□ 0.36
SNX27-204ENST00000458013 TPRX1Q8N7U7 411 aa17.29■□□□□ 0.36
SNX27-204ENST00000458013 ST6GAL2Q96JF0 529 aa17.29■□□□□ 0.36
SNX27-204ENST00000458013 GNG7O60262 68 aa17.29■□□□□ 0.36
SNX27-204ENST00000458013 FAM157CP0CG43 387 aa17.29■□□□□ 0.36
SNX27-204ENST00000458013 EFNB2P52799 333 aa17.29■□□□□ 0.36
SNX27-204ENST00000458013 RPL30P62888 115 aaKnown RBP17.29■□□□□ 0.36
SNX27-204ENST00000458013 IL11RAQ14626 422 aa17.29■□□□□ 0.36
SNX27-204ENST00000458013 OR5A2Q8NGI9 324 aa17.29■□□□□ 0.36
SNX27-204ENST00000458013 OR4X1Q8NH49 305 aa17.29■□□□□ 0.36
SNX27-204ENST00000458013 PIK3IP1Q96FE7 263 aa17.29■□□□□ 0.36
SNX27-204ENST00000458013 RNASE1P07998 156 aaKnown RBP17.29■□□□□ 0.36
SNX27-204ENST00000458013 FAM222BQ8WU58 562 aa17.29■□□□□ 0.36
SNX27-204ENST00000458013 NTMQ9P121 344 aa17.29■□□□□ 0.36
SNX27-204ENST00000458013 NAT8Q9UHE5 227 aa17.29■□□□□ 0.36
SNX27-204ENST00000458013 CCL3P10147 92 aa17.28■□□□□ 0.36
SNX27-204ENST00000458013 GCSHP23434 173 aa17.28■□□□□ 0.36
SNX27-204ENST00000458013 GPBAR1Q8TDU6 330 aa17.28■□□□□ 0.36
SNX27-204ENST00000458013 OR10C1Q96KK4 312 aa17.28■□□□□ 0.36
SNX27-204ENST00000458013 RAB1BQ9H0U4 201 aa17.28■□□□□ 0.36
SNX27-204ENST00000458013 LHX9Q9NQ69 397 aa17.28■□□□□ 0.36
SNX27-204ENST00000458013 MBD1Q9UIS9 605 aaPredicted RBP17.28■□□□□ 0.36
SNX27-204ENST00000458013 P01737 135 aa17.28■□□□□ 0.36
SNX27-204ENST00000458013 C19orf35Q6ZS72 473 aa17.28■□□□□ 0.36
SNX27-204ENST00000458013 TCTEX1D1Q8N7M0 179 aa17.28■□□□□ 0.36
SNX27-204ENST00000458013 HMGCLL1Q8TB92 370 aa17.28■□□□□ 0.36
SNX27-204ENST00000458013 ZPLD1Q8TCW7 415 aa17.28■□□□□ 0.36
SNX27-204ENST00000458013 GRAMD2BQ96HH9 432 aa17.28■□□□□ 0.36
SNX27-204ENST00000458013 TRAF4Q9BUZ4 470 aaPredicted RBP17.28■□□□□ 0.36
SNX27-204ENST00000458013 VSIG4Q9Y279 399 aa17.28■□□□□ 0.36
SNX27-204ENST00000458013 OOEPA6NGQ2 149 aa17.28■□□□□ 0.36
SNX27-204ENST00000458013 EIF3GO75821 320 aaKnown RBP eCLIP17.28■□□□□ 0.36
SNX27-204ENST00000458013 NAAAQ02083 359 aa17.28■□□□□ 0.36
SNX27-204ENST00000458013 MRPS18BQ9Y676 258 aaKnown RBP17.28■□□□□ 0.36
SNX27-204ENST00000458013 FFAR1O14842 300 aa17.28■□□□□ 0.36
SNX27-204ENST00000458013 COL13A1Q5TAT6 717 aaPredicted RBP17.28■□□□□ 0.36
SNX27-204ENST00000458013 TMUB1Q9BVT8 246 aa17.28■□□□□ 0.36
SNX27-204ENST00000458013 SLC17A5Q9NRA2 495 aa17.28■□□□□ 0.36
SNX27-204ENST00000458013 MYO9BQ13459 2157 aa17.28■□□□□ 0.36
SNX27-204ENST00000458013 CRISP2P16562 243 aa17.27■□□□□ 0.36
SNX27-204ENST00000458013 RFLNBQ8N5W9 214 aa17.27■□□□□ 0.36
SNX27-204ENST00000458013 MAP1LC3CQ9BXW4 147 aa17.27■□□□□ 0.36
SNX27-204ENST00000458013 V9GYH0 126 aa17.27■□□□□ 0.36
SNX27-204ENST00000458013 FBLL1A6NHQ2 334 aaKnown RBP17.27■□□□□ 0.36
SNX27-204ENST00000458013 NUP205Q92621 2012 aa17.27■□□□□ 0.36
SNX27-204ENST00000458013 CD3EP07766 207 aa17.27■□□□□ 0.36
SNX27-204ENST00000458013 UQCRFS1P47985 274 aa17.27■□□□□ 0.36
SNX27-204ENST00000458013 ZNF770Q6IQ21 691 aaPredicted RBP17.27■□□□□ 0.36
SNX27-204ENST00000458013 LINC00299Q6ZSB3 139 aa17.27■□□□□ 0.36
SNX27-204ENST00000458013 PCGF1Q9BSM1 259 aa17.27■□□□□ 0.36
SNX27-204ENST00000458013 RTN4RQ9BZR6 473 aa17.27■□□□□ 0.36
SNX27-204ENST00000458013 CRISPLD2Q9H0B8 497 aa17.27■□□□□ 0.36
SNX27-204ENST00000458013 HELTA6NFD8 242 aa17.27■□□□□ 0.35
SNX27-204ENST00000458013 DRD3P35462 400 aa17.27■□□□□ 0.35
SNX27-204ENST00000458013 C10orf113Q5VZT2 155 aa17.27■□□□□ 0.35
SNX27-204ENST00000458013 SPICQ8N5J4 248 aa17.27■□□□□ 0.35
SNX27-204ENST00000458013 DTD1Q8TEA8 209 aa17.27■□□□□ 0.35
SNX27-204ENST00000458013 ZNF253O75346 499 aa17.27■□□□□ 0.35
SNX27-204ENST00000458013 GLULP15104 373 aa17.27■□□□□ 0.35
SNX27-204ENST00000458013 PACRGQ96M98 296 aaPredicted RBP17.27■□□□□ 0.35
SNX27-204ENST00000458013 ACAA1P09110 424 aaPredicted RBP17.26■□□□□ 0.35
SNX27-204ENST00000458013 COL10A1Q03692 680 aa17.26■□□□□ 0.35
SNX27-204ENST00000458013 VN1R17PQ8TDU5 208 aa17.26■□□□□ 0.35
SNX27-204ENST00000458013 PAM16Q9Y3D7 125 aa17.26■□□□□ 0.35
SNX27-204ENST00000458013 IGSF11Q5DX21 431 aa17.26■□□□□ 0.35
SNX27-204ENST00000458013 SSX8Q7RTT4 187 aa17.26■□□□□ 0.35
SNX27-204ENST00000458013 IGHV3-72A0A0B4J1Y9 119 aa17.26■□□□□ 0.35
SNX27-204ENST00000458013 HIST3H3Q16695 136 aa17.26■□□□□ 0.35
SNX27-204ENST00000458013 MYH14Q7Z406 1995 aaKnown RBP17.26■□□□□ 0.35
SNX27-204ENST00000458013 IGHV3OR16-12A0A075B7B8 117 aa17.26■□□□□ 0.35
SNX27-204ENST00000458013 MMP9P14780 707 aa17.26■□□□□ 0.35
SNX27-204ENST00000458013 RAB33BQ9H082 229 aa17.26■□□□□ 0.35
SNX27-204ENST00000458013 DUXBA0A1W2PPF3 345 aa17.26■□□□□ 0.35
SNX27-204ENST00000458013 OR4S2Q8NH73 311 aa17.26■□□□□ 0.35
SNX27-204ENST00000458013 SLC25A40Q8TBP6 338 aa17.26■□□□□ 0.35
SNX27-204ENST00000458013 RASL10BQ96S79 203 aa17.26■□□□□ 0.35
SNX27-204ENST00000458013 PRSS50Q9UI38 385 aa17.26■□□□□ 0.35
SNX27-204ENST00000458013 AKAP11Q9UKA4 1901 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms