RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 SHANK1Q9Y566 2161 aa15.75■□□□□ 0.11
SEMA3B-209ENST00000456560 AGPAT2O15120 278 aa15.75■□□□□ 0.11
SEMA3B-209ENST00000456560 TMEM33P57088 247 aa15.75■□□□□ 0.11
SEMA3B-209ENST00000456560 FAM76BQ5HYJ3 339 aa15.75■□□□□ 0.11
SEMA3B-209ENST00000456560 HES3Q5TGS1 186 aa15.75■□□□□ 0.11
SEMA3B-209ENST00000456560 CCDC71LQ8N9Z2 235 aa15.75■□□□□ 0.11
SEMA3B-209ENST00000456560 ZFP62Q8NB50 900 aaPredicted RBP15.75■□□□□ 0.11
SEMA3B-209ENST00000456560 OR5A2Q8NGI9 324 aa15.75■□□□□ 0.11
SEMA3B-209ENST00000456560 PLA2G2EQ9NZK7 142 aa15.75■□□□□ 0.11
SEMA3B-209ENST00000456560 PRSS50Q9UI38 385 aa15.75■□□□□ 0.11
SEMA3B-209ENST00000456560 COLCA2A8K830 154 aa15.75■□□□□ 0.11
SEMA3B-209ENST00000456560 E5RGE8 158 aa15.75■□□□□ 0.11
SEMA3B-209ENST00000456560 RAB5BP61020 215 aa15.75■□□□□ 0.11
SEMA3B-209ENST00000456560 SLC10A1Q14973 349 aa15.75■□□□□ 0.11
SEMA3B-209ENST00000456560 AKIRIN2Q53H80 203 aa15.75■□□□□ 0.11
SEMA3B-209ENST00000456560 MCEMP1Q8IX19 187 aa15.75■□□□□ 0.11
SEMA3B-209ENST00000456560 OPA3Q9H6K4 179 aa15.75■□□□□ 0.11
SEMA3B-209ENST00000456560 NSG2Q9Y328 171 aa15.75■□□□□ 0.11
SEMA3B-209ENST00000456560 ZNF407Q9C0G0 2248 aa15.75■□□□□ 0.11
SEMA3B-209ENST00000456560 CD300LBA8K4G0 201 aa15.74■□□□□ 0.11
SEMA3B-209ENST00000456560 EIF3GO75821 320 aaKnown RBP eCLIP15.74■□□□□ 0.11
SEMA3B-209ENST00000456560 SCGB1D2O95969 90 aa15.74■□□□□ 0.11
SEMA3B-209ENST00000456560 CD80P33681 288 aa15.74■□□□□ 0.11
SEMA3B-209ENST00000456560 PLP2Q04941 152 aa15.74■□□□□ 0.11
SEMA3B-209ENST00000456560 MKXQ8IYA7 352 aa15.74■□□□□ 0.11
SEMA3B-209ENST00000456560 ZNF552Q9H707 407 aaPredicted RBP15.74■□□□□ 0.11
SEMA3B-209ENST00000456560 SMCO4Q9NRQ5 59 aa15.74■□□□□ 0.11
SEMA3B-209ENST00000456560 JTBO76095 146 aa15.74■□□□□ 0.11
SEMA3B-209ENST00000456560 WNT5AP41221 380 aa15.74■□□□□ 0.11
SEMA3B-209ENST00000456560 SULT1A2P50226 295 aa15.74■□□□□ 0.11
SEMA3B-209ENST00000456560 MPV17LQ2QL34 196 aa15.74■□□□□ 0.11
SEMA3B-209ENST00000456560 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.74■□□□□ 0.11
SEMA3B-209ENST00000456560 OR5P3Q8WZ94 311 aa15.74■□□□□ 0.11
SEMA3B-209ENST00000456560 IL36RNQ9UBH0 155 aa15.74■□□□□ 0.11
SEMA3B-209ENST00000456560 MPPED1O15442 326 aa15.73■□□□□ 0.11
SEMA3B-209ENST00000456560 IL18BPO95998 194 aa15.73■□□□□ 0.11
SEMA3B-209ENST00000456560 CD5P06127 495 aa15.73■□□□□ 0.11
SEMA3B-209ENST00000456560 GLI4P10075 376 aa15.73■□□□□ 0.11
SEMA3B-209ENST00000456560 DUSP1P28562 367 aa15.73■□□□□ 0.11
SEMA3B-209ENST00000456560 SNRPEP62304 92 aaKnown RBP15.73■□□□□ 0.11
SEMA3B-209ENST00000456560 BTNL8Q6UX41 500 aa15.73■□□□□ 0.11
SEMA3B-209ENST00000456560 C5orf24Q7Z6I8 188 aa15.73■□□□□ 0.11
SEMA3B-209ENST00000456560 FAM185AQ8N0U4 392 aa15.73■□□□□ 0.11
SEMA3B-209ENST00000456560 WDYHV1Q96HA8 205 aa15.73■□□□□ 0.11
SEMA3B-209ENST00000456560 TP53RKQ96S44 253 aa15.73■□□□□ 0.11
SEMA3B-209ENST00000456560 ARV1Q9H2C2 271 aa15.73■□□□□ 0.11
SEMA3B-209ENST00000456560 ARHGAP21Q5T5U3 1957 aa15.73■□□□□ 0.11
SEMA3B-209ENST00000456560 ZNF292O60281 2723 aa15.73■□□□□ 0.11
SEMA3B-209ENST00000456560 TRAPPC2LH3BP13 241 aa15.72■□□□□ 0.11
SEMA3B-209ENST00000456560 PHF1O43189 567 aaPredicted RBP15.72■□□□□ 0.11
SEMA3B-209ENST00000456560 SYNGR1O43759 233 aa15.72■□□□□ 0.11
SEMA3B-209ENST00000456560 FBXO24O75426 580 aa15.72■□□□□ 0.11
SEMA3B-209ENST00000456560 GNRHRP30968 328 aa15.72■□□□□ 0.11
SEMA3B-209ENST00000456560 F2RL1P55085 397 aa15.72■□□□□ 0.11
SEMA3B-209ENST00000456560 HABP2Q14520 560 aaPredicted RBP15.72■□□□□ 0.11
SEMA3B-209ENST00000456560 OR52M1Q8NGK5 317 aa15.72■□□□□ 0.11
SEMA3B-209ENST00000456560 OR1K1Q8NGR3 316 aa15.72■□□□□ 0.11
SEMA3B-209ENST00000456560 BCL2L2Q92843 193 aaPredicted RBP15.72■□□□□ 0.11
SEMA3B-209ENST00000456560 ERGIC1Q969X5 290 aa15.72■□□□□ 0.11
SEMA3B-209ENST00000456560 BSCL2Q96G97 398 aaPredicted RBP15.72■□□□□ 0.11
SEMA3B-209ENST00000456560 HIST1H2AAQ96QV6 131 aa15.72■□□□□ 0.11
SEMA3B-209ENST00000456560 DEFB127Q9H1M4 99 aa15.72■□□□□ 0.11
SEMA3B-209ENST00000456560 DNAJC13O75165 2243 aa15.72■□□□□ 0.11
SEMA3B-209ENST00000456560 C9JQL5 133 aa15.72■□□□□ 0.11
SEMA3B-209ENST00000456560 DIRAS3O95661 229 aa15.72■□□□□ 0.11
SEMA3B-209ENST00000456560 FOLR2P14207 255 aa15.72■□□□□ 0.11
SEMA3B-209ENST00000456560 CD46P15529 392 aa15.72■□□□□ 0.11
SEMA3B-209ENST00000456560 HIKESHIQ53FT3 197 aa15.72■□□□□ 0.11
SEMA3B-209ENST00000456560 DPPA2Q7Z7J5 298 aa15.72■□□□□ 0.11
SEMA3B-209ENST00000456560 UBAC2Q8NBM4 344 aa15.72■□□□□ 0.11
SEMA3B-209ENST00000456560 C14orf79Q96F83 325 aa15.72■□□□□ 0.11
SEMA3B-209ENST00000456560 ZDHHC8Q9ULC8 765 aa15.72■□□□□ 0.11
SEMA3B-209ENST00000456560 TMED3Q9Y3Q3 217 aa15.72■□□□□ 0.11
SEMA3B-209ENST00000456560 C3orf85A0A1B0GTC6 90 aa15.71■□□□□ 0.11
SEMA3B-209ENST00000456560 ACAA1P09110 424 aaPredicted RBP15.71■□□□□ 0.11
SEMA3B-209ENST00000456560 SCTP09683 121 aa15.71■□□□□ 0.11
SEMA3B-209ENST00000456560 APLNRP35414 380 aa15.71■□□□□ 0.11
SEMA3B-209ENST00000456560 ID4P47928 161 aa15.71■□□□□ 0.11
SEMA3B-209ENST00000456560 RND3P61587 244 aa15.71■□□□□ 0.11
SEMA3B-209ENST00000456560 ATP1A1-AS1Q5TC04 95 aa15.71■□□□□ 0.11
SEMA3B-209ENST00000456560 GPR157Q5UAW9 335 aa15.71■□□□□ 0.11
SEMA3B-209ENST00000456560 C15orf54Q8N8G6 183 aa15.71■□□□□ 0.11
SEMA3B-209ENST00000456560 KIRREL1Q96J84 757 aa15.71■□□□□ 0.11
SEMA3B-209ENST00000456560 SMIM3Q9BZL3 60 aa15.71■□□□□ 0.11
SEMA3B-209ENST00000456560 PARP11Q9NR21 331 aa15.71■□□□□ 0.11
SEMA3B-209ENST00000456560 GPR137BO60478 399 aa15.71■□□□□ 0.1
SEMA3B-209ENST00000456560 LILRA1O75019 489 aa15.71■□□□□ 0.1
SEMA3B-209ENST00000456560 GLAP06280 429 aa15.71■□□□□ 0.1
SEMA3B-209ENST00000456560 PTAFRP25105 342 aa15.71■□□□□ 0.1
SEMA3B-209ENST00000456560 NBL1P41271 181 aa15.71■□□□□ 0.1
SEMA3B-209ENST00000456560 DVL1P1P54792 670 aaPredicted RBP15.71■□□□□ 0.1
SEMA3B-209ENST00000456560 IL13RA2Q14627 380 aa15.71■□□□□ 0.1
SEMA3B-209ENST00000456560 HERPUD1Q15011 391 aa15.71■□□□□ 0.1
SEMA3B-209ENST00000456560 TGIF1Q15583 401 aa15.71■□□□□ 0.1
SEMA3B-209ENST00000456560 RNFT1Q5M7Z0 435 aa15.71■□□□□ 0.1
SEMA3B-209ENST00000456560 ETV3LQ6ZN32 361 aa15.71■□□□□ 0.1
SEMA3B-209ENST00000456560 Q6ZRG5 221 aa15.71■□□□□ 0.1
SEMA3B-209ENST00000456560 SLC35G3Q8N808 338 aa15.71■□□□□ 0.1
SEMA3B-209ENST00000456560 OR4D5Q8NGN0 318 aa15.71■□□□□ 0.1
SEMA3B-209ENST00000456560 AKR1E2Q96JD6 320 aa15.71■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms