RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 DOCK8Q8NF50 2099 aa8.91□□□□□ -0.98
CLIP4-208ENST00000456385 TGOLN2O43493 480 aa8.91□□□□□ -0.98
CLIP4-208ENST00000456385 PPYP01298 95 aa8.91□□□□□ -0.98
CLIP4-208ENST00000456385 IGHV4-34P06331 123 aa8.91□□□□□ -0.98
CLIP4-208ENST00000456385 THEGLP0DJG4 465 aa8.91□□□□□ -0.98
CLIP4-208ENST00000456385 TAS2R30P59541 319 aa8.91□□□□□ -0.98
CLIP4-208ENST00000456385 HERV-K104P61576 105 aa8.91□□□□□ -0.98
CLIP4-208ENST00000456385 PAX5Q02548 391 aa8.91□□□□□ -0.98
CLIP4-208ENST00000456385 RELQ04864 619 aaPredicted RBP8.91□□□□□ -0.98
CLIP4-208ENST00000456385 PMS2P11Q13670 270 aa8.91□□□□□ -0.98
CLIP4-208ENST00000456385 ZNF726P1Q15940 193 aa8.91□□□□□ -0.98
CLIP4-208ENST00000456385 SPIN3Q5JUX0 258 aa8.91□□□□□ -0.98
CLIP4-208ENST00000456385 FAM180AQ6UWF9 173 aa8.91□□□□□ -0.98
CLIP4-208ENST00000456385 TBC1D26Q86UD7 250 aa8.91□□□□□ -0.98
CLIP4-208ENST00000456385 SELENOHQ8IZQ5 122 aaKnown RBP8.91□□□□□ -0.98
CLIP4-208ENST00000456385 TMEM37Q8WXS4 190 aa8.91□□□□□ -0.98
CLIP4-208ENST00000456385 SIGLEC12Q96PQ1 595 aa8.91□□□□□ -0.98
CLIP4-208ENST00000456385 CDCA3Q99618 268 aaPredicted RBP8.91□□□□□ -0.98
CLIP4-208ENST00000456385 SRD5A3Q9H8P0 318 aa8.91□□□□□ -0.98
CLIP4-208ENST00000456385 CISD1Q9NZ45 108 aaKnown RBP8.91□□□□□ -0.98
CLIP4-208ENST00000456385 GCGP01275 180 aa8.9□□□□□ -0.98
CLIP4-208ENST00000456385 CEACAM1P13688 526 aa8.9□□□□□ -0.98
CLIP4-208ENST00000456385 HOXA6P31267 233 aa8.9□□□□□ -0.98
CLIP4-208ENST00000456385 PAX9P55771 341 aa8.9□□□□□ -0.98
CLIP4-208ENST00000456385 GNB2P62879 340 aa8.9□□□□□ -0.98
CLIP4-208ENST00000456385 MRPS34P82930 218 aaKnown RBP8.9□□□□□ -0.98
CLIP4-208ENST00000456385 ADIRFQ15847 76 aa8.9□□□□□ -0.98
CLIP4-208ENST00000456385 ZNF787Q6DD87 383 aa8.9□□□□□ -0.98
CLIP4-208ENST00000456385 C16orf82Q7Z2V1 217 aa8.9□□□□□ -0.98
CLIP4-208ENST00000456385 CCDC71LQ8N9Z2 235 aa8.9□□□□□ -0.98
CLIP4-208ENST00000456385 POC1BQ8TC44 478 aa8.9□□□□□ -0.98
CLIP4-208ENST00000456385 ATP5SQ99766 215 aa8.9□□□□□ -0.98
CLIP4-208ENST00000456385 ELOVL1Q9BW60 279 aa8.9□□□□□ -0.98
CLIP4-208ENST00000456385 TPSD1Q9BZJ3 242 aa8.9□□□□□ -0.98
CLIP4-208ENST00000456385 IGFLR1Q9H665 355 aa8.9□□□□□ -0.98
CLIP4-208ENST00000456385 PRUNE2Q8WUY3 3088 aa8.9□□□□□ -0.98
CLIP4-208ENST00000456385 IGKV1-12A0A0C4DH73 117 aa8.89□□□□□ -0.99
CLIP4-208ENST00000456385 A0A0U1RQV5 110 aa8.89□□□□□ -0.99
CLIP4-208ENST00000456385 CEBPZOSA8MTT3 80 aa8.89□□□□□ -0.99
CLIP4-208ENST00000456385 ETV2O00321 342 aaPredicted RBP8.89□□□□□ -0.99
CLIP4-208ENST00000456385 IGKV1D-12P01611 117 aa8.89□□□□□ -0.99
CLIP4-208ENST00000456385 TK1P04183 234 aa8.89□□□□□ -0.99
CLIP4-208ENST00000456385 PFN1P07737 140 aaKnown RBP8.89□□□□□ -0.99
CLIP4-208ENST00000456385 TMEM267Q0VDI3 215 aaPredicted RBP8.89□□□□□ -0.99
CLIP4-208ENST00000456385 RTP5Q14D33 572 aa8.89□□□□□ -0.99
CLIP4-208ENST00000456385 RAB35Q15286 201 aa8.89□□□□□ -0.99
CLIP4-208ENST00000456385 EXT1Q16394 746 aa8.89□□□□□ -0.99
CLIP4-208ENST00000456385 PHYHD1Q5SRE7 291 aa8.89□□□□□ -0.99
CLIP4-208ENST00000456385 SLC25A24Q6NUK1 477 aa8.89□□□□□ -0.99
CLIP4-208ENST00000456385 H1FOOQ8IZA3 346 aaPredicted RBP8.89□□□□□ -0.99
CLIP4-208ENST00000456385 GPR137CQ8N3F9 429 aa8.89□□□□□ -0.99
CLIP4-208ENST00000456385 PLPPR1Q8TBJ4 325 aa8.89□□□□□ -0.99
CLIP4-208ENST00000456385 ADGRG7Q96K78 797 aa8.89□□□□□ -0.99
CLIP4-208ENST00000456385 ZNF286AQ9HBT8 521 aa8.89□□□□□ -0.99
CLIP4-208ENST00000456385 SLC7A10Q9NS82 523 aa8.89□□□□□ -0.99
CLIP4-208ENST00000456385 HS3ST3A1Q9Y663 406 aa8.89□□□□□ -0.99
CLIP4-208ENST00000456385 TRAV1-1A0A0B4J248 108 aa8.89□□□□□ -0.99
CLIP4-208ENST00000456385 H3BMH7 237 aa8.89□□□□□ -0.99
CLIP4-208ENST00000456385 CTSSP25774 331 aa8.89□□□□□ -0.99
CLIP4-208ENST00000456385 NUBP1P53384 320 aa8.89□□□□□ -0.99
CLIP4-208ENST00000456385 UCP3P55916 312 aa8.89□□□□□ -0.99
CLIP4-208ENST00000456385 CLDN17P56750 224 aa8.89□□□□□ -0.99
CLIP4-208ENST00000456385 ID3Q02535 119 aa8.89□□□□□ -0.99
CLIP4-208ENST00000456385 HIST3H3Q16695 136 aa8.89□□□□□ -0.99
CLIP4-208ENST00000456385 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.89□□□□□ -0.99
CLIP4-208ENST00000456385 ZNF818PQ6ZRF7 136 aa8.89□□□□□ -0.99
CLIP4-208ENST00000456385 LRP11Q86VZ4 500 aa8.89□□□□□ -0.99
CLIP4-208ENST00000456385 MRPL41Q8IXM3 137 aaKnown RBP8.89□□□□□ -0.99
CLIP4-208ENST00000456385 MAML2Q8IZL2 1156 aaPredicted RBP8.89□□□□□ -0.99
CLIP4-208ENST00000456385 TMEM56Q96MV1 263 aa8.89□□□□□ -0.99
CLIP4-208ENST00000456385 PCGF1Q9BSM1 259 aa8.89□□□□□ -0.99
CLIP4-208ENST00000456385 TMEM106CQ9BVX2 250 aa8.89□□□□□ -0.99
CLIP4-208ENST00000456385 HIPK2Q9H2X6 1198 aa8.89□□□□□ -0.99
CLIP4-208ENST00000456385 RBKSQ9H477 322 aa8.89□□□□□ -0.99
CLIP4-208ENST00000456385 P4HTMQ9NXG6 502 aa8.89□□□□□ -0.99
CLIP4-208ENST00000456385 KLRF1Q9NZS2 232 aa8.89□□□□□ -0.99
CLIP4-208ENST00000456385 ST3GAL6Q9Y274 331 aa8.89□□□□□ -0.99
CLIP4-208ENST00000456385 MTCH2Q9Y6C9 303 aa8.89□□□□□ -0.99
CLIP4-208ENST00000456385 TMEM56-RWDD3S4R434 201 aa8.89□□□□□ -0.99
CLIP4-208ENST00000456385 ATG2AQ2TAZ0 1938 aa8.88□□□□□ -0.99
CLIP4-208ENST00000456385 TCRBV21S2A2A0A5A6 115 aa8.88□□□□□ -0.99
CLIP4-208ENST00000456385 A6NNC1 897 aa8.88□□□□□ -0.99
CLIP4-208ENST00000456385 M0R135 149 aa8.88□□□□□ -0.99
CLIP4-208ENST00000456385 FGF5P12034 268 aa8.88□□□□□ -0.99
CLIP4-208ENST00000456385 ZNF41P51814 821 aaPredicted RBP8.88□□□□□ -0.99
CLIP4-208ENST00000456385 TDGF1P3P51864 188 aa8.88□□□□□ -0.99
CLIP4-208ENST00000456385 ELLP55199 621 aaPredicted RBP8.88□□□□□ -0.99
CLIP4-208ENST00000456385 BAXQ07812 192 aa8.88□□□□□ -0.99
CLIP4-208ENST00000456385 ENDOGQ14249 297 aaKnown RBP8.88□□□□□ -0.99
CLIP4-208ENST00000456385 KCNMB1Q16558 191 aa8.88□□□□□ -0.99
CLIP4-208ENST00000456385 IZUMO4Q1ZYL8 232 aa8.88□□□□□ -0.99
CLIP4-208ENST00000456385 COA6Q5JTJ3 125 aaKnown RBP8.88□□□□□ -0.99
CLIP4-208ENST00000456385 SLC25A26Q70HW3 274 aa8.88□□□□□ -0.99
CLIP4-208ENST00000456385 GAPTQ8N292 157 aa8.88□□□□□ -0.99
CLIP4-208ENST00000456385 ZNF799Q96GE5 643 aa8.88□□□□□ -0.99
CLIP4-208ENST00000456385 FUT9Q9Y231 359 aa8.88□□□□□ -0.99
CLIP4-208ENST00000456385 RNF115Q9Y4L5 304 aa8.88□□□□□ -0.99
CLIP4-208ENST00000456385 A0A1W2PPQ1 181 aa8.88□□□□□ -0.99
CLIP4-208ENST00000456385 M0R143 59 aa8.88□□□□□ -0.99
CLIP4-208ENST00000456385 MBP02144 154 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms