RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 CHST6Q9GZX3 395 aa11.82□□□□□ -0.52
HMGXB4-204ENST00000455359 PPA2Q9H2U2 334 aa11.82□□□□□ -0.52
HMGXB4-204ENST00000455359 PEX16Q9Y5Y5 336 aa11.82□□□□□ -0.52
HMGXB4-204ENST00000455359 KPTNQ9Y664 436 aa11.82□□□□□ -0.52
HMGXB4-204ENST00000455359 A0A0A6YYH2 397 aa11.81□□□□□ -0.52
HMGXB4-204ENST00000455359 A0A0B4J203 849 aa11.81□□□□□ -0.52
HMGXB4-204ENST00000455359 hCG_1809904A0A1W2PP81 198 aa11.81□□□□□ -0.52
HMGXB4-204ENST00000455359 A0A1W2PPE2 198 aa11.81□□□□□ -0.52
HMGXB4-204ENST00000455359 A0A1W2PQ09 198 aa11.81□□□□□ -0.52
HMGXB4-204ENST00000455359 A0A1W2PR64 198 aa11.81□□□□□ -0.52
HMGXB4-204ENST00000455359 A0A1W2PRV1 198 aa11.81□□□□□ -0.52
HMGXB4-204ENST00000455359 A6NJ64 397 aa11.81□□□□□ -0.52
HMGXB4-204ENST00000455359 FOXI3A8MTJ6 420 aaPredicted RBP11.81□□□□□ -0.52
HMGXB4-204ENST00000455359 H3BMQ9 156 aa11.81□□□□□ -0.52
HMGXB4-204ENST00000455359 M0R1W7 72 aa11.81□□□□□ -0.52
HMGXB4-204ENST00000455359 RBP4P02753 201 aa11.81□□□□□ -0.52
HMGXB4-204ENST00000455359 ZNF182P17025 639 aaPredicted RBP11.81□□□□□ -0.52
HMGXB4-204ENST00000455359 CHATP28329 748 aa11.81□□□□□ -0.52
HMGXB4-204ENST00000455359 BLVRBP30043 206 aaPredicted RBP11.81□□□□□ -0.52
HMGXB4-204ENST00000455359 SOX6P35712 828 aa11.81□□□□□ -0.52
HMGXB4-204ENST00000455359 TMEM200BQ69YZ2 307 aa11.81□□□□□ -0.52
HMGXB4-204ENST00000455359 SLC35E4Q6ICL7 350 aa11.81□□□□□ -0.52
HMGXB4-204ENST00000455359 FAHD2BQ6P2I3 314 aaPredicted RBP11.81□□□□□ -0.52
HMGXB4-204ENST00000455359 GAPTQ8N292 157 aa11.81□□□□□ -0.52
HMGXB4-204ENST00000455359 FGFRL1Q8N441 504 aa11.81□□□□□ -0.52
HMGXB4-204ENST00000455359 ZNF565Q8N9K5 539 aa11.81□□□□□ -0.52
HMGXB4-204ENST00000455359 NDNFQ8TB73 568 aa11.81□□□□□ -0.52
HMGXB4-204ENST00000455359 LGALS14Q8TCE9 139 aa11.81□□□□□ -0.52
HMGXB4-204ENST00000455359 CORO2AQ92828 525 aa11.81□□□□□ -0.52
HMGXB4-204ENST00000455359 FAHD2AQ96GK7 314 aa11.81□□□□□ -0.52
HMGXB4-204ENST00000455359 RBM38Q9H0Z9 239 aaKnown RBP11.81□□□□□ -0.52
HMGXB4-204ENST00000455359 RIMS4Q9H426 269 aaPredicted RBP11.81□□□□□ -0.52
HMGXB4-204ENST00000455359 KCNK15Q9H427 330 aa11.81□□□□□ -0.52
HMGXB4-204ENST00000455359 YAE1D1Q9NRH1 226 aa11.81□□□□□ -0.52
HMGXB4-204ENST00000455359 C19orf12Q9NSK7 152 aa11.81□□□□□ -0.52
HMGXB4-204ENST00000455359 OR6C3Q9NZP0 311 aa11.81□□□□□ -0.52
HMGXB4-204ENST00000455359 RSL24D1Q9UHA3 163 aaKnown RBP11.81□□□□□ -0.52
HMGXB4-204ENST00000455359 UBE2J1Q9Y385 318 aaPredicted RBP11.81□□□□□ -0.52
HMGXB4-204ENST00000455359 LINC00312Q9Y6C7 94 aa11.81□□□□□ -0.52
HMGXB4-204ENST00000455359 TMEM30CPA0ZSE6 113 aa11.8□□□□□ -0.52
HMGXB4-204ENST00000455359 ODAMA1E959 279 aa11.8□□□□□ -0.52
HMGXB4-204ENST00000455359 PAHP00439 452 aa11.8□□□□□ -0.52
HMGXB4-204ENST00000455359 SNRPBP14678 240 aaKnown RBP11.8□□□□□ -0.52
HMGXB4-204ENST00000455359 EDDM3BP56851 147 aa11.8□□□□□ -0.52
HMGXB4-204ENST00000455359 AESQ08117 197 aa11.8□□□□□ -0.52
HMGXB4-204ENST00000455359 EDDM3AQ14507 147 aa11.8□□□□□ -0.52
HMGXB4-204ENST00000455359 SPCS2Q15005 226 aa11.8□□□□□ -0.52
HMGXB4-204ENST00000455359 KRBOX4Q5JUW0 171 aa11.8□□□□□ -0.52
HMGXB4-204ENST00000455359 METTL11BQ5VVY1 283 aa11.8□□□□□ -0.52
HMGXB4-204ENST00000455359 RSBN1Q5VWQ0 802 aaPredicted RBP11.8□□□□□ -0.52
HMGXB4-204ENST00000455359 FAM185AQ8N0U4 392 aa11.8□□□□□ -0.52
HMGXB4-204ENST00000455359 BPIFB2Q8N4F0 458 aa11.8□□□□□ -0.52
HMGXB4-204ENST00000455359 DGCR14Q96DF8 476 aaKnown RBP11.8□□□□□ -0.52
HMGXB4-204ENST00000455359 SMR3AQ99954 134 aa11.8□□□□□ -0.52
HMGXB4-204ENST00000455359 NICN1Q9BSH3 213 aa11.8□□□□□ -0.52
HMGXB4-204ENST00000455359 ABCG5Q9H222 651 aa11.8□□□□□ -0.52
HMGXB4-204ENST00000455359 C7orf69Q9H7B7 122 aa11.8□□□□□ -0.52
HMGXB4-204ENST00000455359 UNKLQ9H9P5 680 aaKnown RBP11.8□□□□□ -0.52
HMGXB4-204ENST00000455359 PLEKHJ1Q9NW61 149 aa11.8□□□□□ -0.52
HMGXB4-204ENST00000455359 RHBDL2Q9NX52 303 aa11.8□□□□□ -0.52
HMGXB4-204ENST00000455359 TAS2R3Q9NYW6 316 aa11.8□□□□□ -0.52
HMGXB4-204ENST00000455359 CCDC59Q9P031 241 aaKnown RBP11.8□□□□□ -0.52
HMGXB4-204ENST00000455359 AUP1Q9Y679 476 aa11.8□□□□□ -0.52
HMGXB4-204ENST00000455359 ABCA2Q9BZC7 2435 aa11.79□□□□□ -0.52
HMGXB4-204ENST00000455359 TEP1Q99973 2627 aaKnown RBP11.79□□□□□ -0.52
HMGXB4-204ENST00000455359 SONP18583 2426 aaKnown RBP11.79□□□□□ -0.52
HMGXB4-204ENST00000455359 TRGV10A0A0A0MS01 117 aa11.79□□□□□ -0.52
HMGXB4-204ENST00000455359 A0A0A6YYD4 124 aa11.79□□□□□ -0.52
HMGXB4-204ENST00000455359 CCDC160A6NGH7 325 aa11.79□□□□□ -0.52
HMGXB4-204ENST00000455359 RAB27BO00194 218 aa11.79□□□□□ -0.52
HMGXB4-204ENST00000455359 HNF1AP20823 631 aa11.79□□□□□ -0.52
HMGXB4-204ENST00000455359 EFNB2P52799 333 aa11.79□□□□□ -0.52
HMGXB4-204ENST00000455359 ATXN7L3Q14CW9 347 aaPredicted RBP11.79□□□□□ -0.52
HMGXB4-204ENST00000455359 CR1LQ2VPA4 569 aa11.79□□□□□ -0.52
HMGXB4-204ENST00000455359 NKAPLQ5M9Q1 402 aa11.79□□□□□ -0.52
HMGXB4-204ENST00000455359 MZT2AQ6P582 158 aa11.79□□□□□ -0.52
HMGXB4-204ENST00000455359 ZNF497Q6ZNH5 498 aa11.79□□□□□ -0.52
HMGXB4-204ENST00000455359 Q6ZTK2 550 aa11.79□□□□□ -0.52
HMGXB4-204ENST00000455359 ZNF554Q86TJ5 538 aa11.79□□□□□ -0.52
HMGXB4-204ENST00000455359 OR10R2Q8NGX6 335 aa11.79□□□□□ -0.52
HMGXB4-204ENST00000455359 NEK7Q8TDX7 302 aa11.79□□□□□ -0.52
HMGXB4-204ENST00000455359 RAB3CQ96E17 227 aa11.79□□□□□ -0.52
HMGXB4-204ENST00000455359 COQ2Q96H96 371 aa11.79□□□□□ -0.52
HMGXB4-204ENST00000455359 TMPRSS13Q9BYE2 586 aa11.79□□□□□ -0.52
HMGXB4-204ENST00000455359 ATG5Q9H1Y0 275 aa11.79□□□□□ -0.52
HMGXB4-204ENST00000455359 ETAA1Q9NY74 926 aa11.79□□□□□ -0.52
HMGXB4-204ENST00000455359 ZNF581Q9P0T4 197 aa11.79□□□□□ -0.52
HMGXB4-204ENST00000455359 NSD1Q96L73 2696 aaPredicted RBP11.78□□□□□ -0.52
HMGXB4-204ENST00000455359 MEIKINA0A087WXM9 373 aa11.78□□□□□ -0.52
HMGXB4-204ENST00000455359 SERPINE3A8MV23 424 aa11.78□□□□□ -0.52
HMGXB4-204ENST00000455359 HSPB6O14558 160 aa11.78□□□□□ -0.52
HMGXB4-204ENST00000455359 SOCS1O15524 211 aa11.78□□□□□ -0.52
HMGXB4-204ENST00000455359 MT-ND4P03905 459 aa11.78□□□□□ -0.52
HMGXB4-204ENST00000455359 ZNF728P0DKX0 622 aa11.78□□□□□ -0.52
HMGXB4-204ENST00000455359 CR1P17927 2039 aa11.78□□□□□ -0.52
HMGXB4-204ENST00000455359 GZMHP20718 246 aa11.78□□□□□ -0.52
HMGXB4-204ENST00000455359 GLIPR1P48060 266 aa11.78□□□□□ -0.52
HMGXB4-204ENST00000455359 VEGFCP49767 419 aa11.78□□□□□ -0.52
HMGXB4-204ENST00000455359 PLA2G7Q13093 441 aa11.78□□□□□ -0.52
HMGXB4-204ENST00000455359 UBE2NLQ5JXB2 153 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms