RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 OR52W1Q6IF63 320 aa12.72□□□□□ -0.37
GPC1-206ENST00000455111 CBR4Q8N4T8 237 aa12.72□□□□□ -0.37
GPC1-206ENST00000455111 Q8NFD4 153 aa12.72□□□□□ -0.37
GPC1-206ENST00000455111 OR10K1Q8NGX5 313 aa12.72□□□□□ -0.37
GPC1-206ENST00000455111 LINC00574Q9H8X3 128 aa12.72□□□□□ -0.37
GPC1-206ENST00000455111 ERVK13-1Q9NX77 482 aa12.72□□□□□ -0.37
GPC1-206ENST00000455111 KIF25Q9UIL4 384 aa12.72□□□□□ -0.37
GPC1-206ENST00000455111 SIRT4Q9Y6E7 314 aaPredicted RBP12.72□□□□□ -0.37
GPC1-206ENST00000455111 KBTBD11-OT1A0A1B0GTJ5 212 aa12.71□□□□□ -0.37
GPC1-206ENST00000455111 TCRBV4S1A1TA0A5B7 111 aa12.71□□□□□ -0.37
GPC1-206ENST00000455111 NPIPB11E5RHQ5 1161 aa12.71□□□□□ -0.37
GPC1-206ENST00000455111 H0YJX3 145 aa12.71□□□□□ -0.37
GPC1-206ENST00000455111 DEGS1O15121 323 aa12.71□□□□□ -0.37
GPC1-206ENST00000455111 SULT1B1O43704 296 aa12.71□□□□□ -0.37
GPC1-206ENST00000455111 PEX14O75381 377 aa12.71□□□□□ -0.37
GPC1-206ENST00000455111 LIMS3P0CW19 117 aa12.71□□□□□ -0.37
GPC1-206ENST00000455111 LIMS4P0CW20 117 aa12.71□□□□□ -0.37
GPC1-206ENST00000455111 PIGYQ3MUY2 71 aa12.71□□□□□ -0.37
GPC1-206ENST00000455111 CENPVQ7Z7K6 275 aaPredicted RBP12.71□□□□□ -0.37
GPC1-206ENST00000455111 SYS1Q8N2H4 156 aa12.71□□□□□ -0.37
GPC1-206ENST00000455111 CHST4Q8NCG5 386 aa12.71□□□□□ -0.37
GPC1-206ENST00000455111 OR52I1Q8NGK6 324 aa12.71□□□□□ -0.37
GPC1-206ENST00000455111 RHOXF1Q8NHV9 184 aa12.71□□□□□ -0.37
GPC1-206ENST00000455111 ORAI1Q96D31 301 aa12.71□□□□□ -0.37
GPC1-206ENST00000455111 NEK6Q9HC98 313 aa12.71□□□□□ -0.37
GPC1-206ENST00000455111 CALYQ9NYX4 217 aa12.71□□□□□ -0.37
GPC1-206ENST00000455111 GLS2Q9UI32 602 aa12.71□□□□□ -0.37
GPC1-206ENST00000455111 TSSC4Q9Y5U2 329 aaPredicted RBP12.71□□□□□ -0.37
GPC1-206ENST00000455111 LINC01548A6NM66 108 aa12.7□□□□□ -0.38
GPC1-206ENST00000455111 J3QR06 171 aa12.7□□□□□ -0.38
GPC1-206ENST00000455111 ATP5HO75947 161 aa12.7□□□□□ -0.38
GPC1-206ENST00000455111 MPIG6BO95866 241 aa12.7□□□□□ -0.38
GPC1-206ENST00000455111 SNRNP70P08621 437 aaKnown RBP12.7□□□□□ -0.38
GPC1-206ENST00000455111 TMEM225BP0DP42 221 aa12.7□□□□□ -0.38
GPC1-206ENST00000455111 CD33P20138 364 aa12.7□□□□□ -0.38
GPC1-206ENST00000455111 NFYBP25208 207 aa12.7□□□□□ -0.38
GPC1-206ENST00000455111 BRS3P32247 399 aa12.7□□□□□ -0.38
GPC1-206ENST00000455111 MTNR1BP49286 362 aa12.7□□□□□ -0.38
GPC1-206ENST00000455111 RBM39Q14498 530 aaKnown RBP12.7□□□□□ -0.38
GPC1-206ENST00000455111 SMN1Q16637 294 aaKnown RBP12.7□□□□□ -0.38
GPC1-206ENST00000455111 ASCL4Q6XD76 172 aa12.7□□□□□ -0.38
GPC1-206ENST00000455111 LINC00482Q8N8I6 264 aa12.7□□□□□ -0.38
GPC1-206ENST00000455111 PXT1Q8NFP0 134 aa12.7□□□□□ -0.38
GPC1-206ENST00000455111 CNIH3Q8TBE1 160 aa12.7□□□□□ -0.38
GPC1-206ENST00000455111 STMN2Q93045 179 aa12.7□□□□□ -0.38
GPC1-206ENST00000455111 NOL4LQ96MY1 436 aaPredicted RBP12.7□□□□□ -0.38
GPC1-206ENST00000455111 NR1H4Q96RI1 486 aaPredicted RBP12.7□□□□□ -0.38
GPC1-206ENST00000455111 RHOFQ9HBH0 211 aa12.7□□□□□ -0.38
GPC1-206ENST00000455111 MRPS18AQ9NVS2 196 aaKnown RBP12.7□□□□□ -0.38
GPC1-206ENST00000455111 TAS2R4Q9NYW5 299 aa12.7□□□□□ -0.38
GPC1-206ENST00000455111 PSG11Q9UQ72 335 aa12.7□□□□□ -0.38
GPC1-206ENST00000455111 ZNF281Q9Y2X9 895 aa12.7□□□□□ -0.38
GPC1-206ENST00000455111 A0A1W2PPE3 182 aa12.69□□□□□ -0.38
GPC1-206ENST00000455111 ALDOBP05062 364 aa12.69□□□□□ -0.38
GPC1-206ENST00000455111 HCKP08631 526 aa12.69□□□□□ -0.38
GPC1-206ENST00000455111 SSTR5P35346 364 aa12.69□□□□□ -0.38
GPC1-206ENST00000455111 GLP1RP43220 463 aa12.69□□□□□ -0.38
GPC1-206ENST00000455111 RASSF2P50749 326 aa12.69□□□□□ -0.38
GPC1-206ENST00000455111 DOC2BQ14184 412 aa12.69□□□□□ -0.38
GPC1-206ENST00000455111 C11orf87Q6NUJ2 197 aa12.69□□□□□ -0.38
GPC1-206ENST00000455111 ZNF329Q86UD4 541 aa12.69□□□□□ -0.38
GPC1-206ENST00000455111 SERPINA12Q8IW75 414 aa12.69□□□□□ -0.38
GPC1-206ENST00000455111 DRAM1Q8N682 238 aa12.69□□□□□ -0.38
GPC1-206ENST00000455111 C5orf56Q8N8D9 126 aa12.69□□□□□ -0.38
GPC1-206ENST00000455111 OR4D6Q8NGJ1 314 aa12.69□□□□□ -0.38
GPC1-206ENST00000455111 OR56B4Q8NH76 319 aa12.69□□□□□ -0.38
GPC1-206ENST00000455111 OR9G1Q8NH87 305 aa12.69□□□□□ -0.38
GPC1-206ENST00000455111 RFESDQ8TAC1 157 aa12.69□□□□□ -0.38
GPC1-206ENST00000455111 MRGPRDQ8TDS7 321 aa12.69□□□□□ -0.38
GPC1-206ENST00000455111 CAPSLQ8WWF8 208 aa12.69□□□□□ -0.38
GPC1-206ENST00000455111 IDI2-AS1Q9NZ38 188 aa12.69□□□□□ -0.38
GPC1-206ENST00000455111 LINC00527Q9UJ94 153 aa12.69□□□□□ -0.38
GPC1-206ENST00000455111 GMPPBQ9Y5P6 360 aa12.69□□□□□ -0.38
GPC1-206ENST00000455111 A0A1W2PP11 408 aa12.68□□□□□ -0.38
GPC1-206ENST00000455111 TOR1AO14656 332 aa12.68□□□□□ -0.38
GPC1-206ENST00000455111 WBP4O75554 376 aaKnown RBP12.68□□□□□ -0.38
GPC1-206ENST00000455111 LALBAP00709 142 aa12.68□□□□□ -0.38
GPC1-206ENST00000455111 IL1AP01583 271 aa12.68□□□□□ -0.38
GPC1-206ENST00000455111 PF4V1P10720 104 aa12.68□□□□□ -0.38
GPC1-206ENST00000455111 HOXD3P31249 432 aaPredicted RBP12.68□□□□□ -0.38
GPC1-206ENST00000455111 SOX2P48431 317 aa12.68□□□□□ -0.38
GPC1-206ENST00000455111 PAX5Q02548 391 aa12.68□□□□□ -0.38
GPC1-206ENST00000455111 EGFEM1PQ0D2K5 195 aa12.68□□□□□ -0.38
GPC1-206ENST00000455111 LTC4SQ16873 150 aa12.68□□□□□ -0.38
GPC1-206ENST00000455111 THNSL2Q86YJ6 484 aa12.68□□□□□ -0.38
GPC1-206ENST00000455111 OSR2Q8N2R0 312 aa12.68□□□□□ -0.38
GPC1-206ENST00000455111 OR5AK2Q8NH90 309 aa12.68□□□□□ -0.38
GPC1-206ENST00000455111 JAM3Q9BX67 310 aa12.68□□□□□ -0.38
GPC1-206ENST00000455111 NCOR1P1Q9H4R4 102 aa12.68□□□□□ -0.38
GPC1-206ENST00000455111 MEIKINA0A087WXM9 373 aa12.67□□□□□ -0.38
GPC1-206ENST00000455111 FUOMA2VDF0 154 aa12.67□□□□□ -0.38
GPC1-206ENST00000455111 MAGEA13PA6NCF6 341 aa12.67□□□□□ -0.38
GPC1-206ENST00000455111 TMEM212A6NML5 194 aa12.67□□□□□ -0.38
GPC1-206ENST00000455111 OOSP1A8MZH6 123 aa12.67□□□□□ -0.38
GPC1-206ENST00000455111 CIB2O75838 187 aa12.67□□□□□ -0.38
GPC1-206ENST00000455111 CDRT1O95170 752 aa12.67□□□□□ -0.38
GPC1-206ENST00000455111 GNG10P50151 68 aa12.67□□□□□ -0.38
GPC1-206ENST00000455111 PRRX1P54821 245 aa12.67□□□□□ -0.38
GPC1-206ENST00000455111 IL13RA2Q14627 380 aa12.67□□□□□ -0.38
GPC1-206ENST00000455111 PAN3Q58A45 887 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms