RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 FIGNL2A6NMB9 653 aa10.32□□□□□ -0.76
SMPD4-213ENST00000454468 NDUFA2O43678 99 aa10.32□□□□□ -0.76
SMPD4-213ENST00000454468 RHBDL1O75783 438 aa10.32□□□□□ -0.76
SMPD4-213ENST00000454468 RNF224P0DH78 156 aa10.32□□□□□ -0.76
SMPD4-213ENST00000454468 CCL1P22362 96 aa10.32□□□□□ -0.76
SMPD4-213ENST00000454468 LHX2P50458 406 aa10.32□□□□□ -0.76
SMPD4-213ENST00000454468 RBM11P57052 281 aaKnown RBP10.32□□□□□ -0.76
SMPD4-213ENST00000454468 NHLH2Q02577 135 aa10.32□□□□□ -0.76
SMPD4-213ENST00000454468 TGFBR3Q03167 851 aa10.32□□□□□ -0.76
SMPD4-213ENST00000454468 LYPD6Q86Y78 171 aa10.32□□□□□ -0.76
SMPD4-213ENST00000454468 TPRX1Q8N7U7 411 aa10.32□□□□□ -0.76
SMPD4-213ENST00000454468 TMEM178AQ8NBL3 297 aa10.32□□□□□ -0.76
SMPD4-213ENST00000454468 OR52M1Q8NGK5 317 aa10.32□□□□□ -0.76
SMPD4-213ENST00000454468 OR1J1Q8NGS3 322 aa10.32□□□□□ -0.76
SMPD4-213ENST00000454468 OR8U1Q8NH10 309 aa10.32□□□□□ -0.76
SMPD4-213ENST00000454468 OSGIN2Q9Y236 505 aa10.32□□□□□ -0.76
SMPD4-213ENST00000454468 ZNF503-AS2A6NEH8 195 aa10.31□□□□□ -0.76
SMPD4-213ENST00000454468 EIF3GO75821 320 aaKnown RBP eCLIP10.31□□□□□ -0.76
SMPD4-213ENST00000454468 CD8AP01732 235 aa10.31□□□□□ -0.76
SMPD4-213ENST00000454468 CHATP28329 748 aa10.31□□□□□ -0.76
SMPD4-213ENST00000454468 FHITP49789 147 aa10.31□□□□□ -0.76
SMPD4-213ENST00000454468 FAHD2BQ6P2I3 314 aaPredicted RBP10.31□□□□□ -0.76
SMPD4-213ENST00000454468 TMEM182Q6ZP80 229 aaPredicted RBP10.31□□□□□ -0.76
SMPD4-213ENST00000454468 GAPTQ8N292 157 aa10.31□□□□□ -0.76
SMPD4-213ENST00000454468 NANOS1Q8WY41 292 aaKnown RBP10.31□□□□□ -0.76
SMPD4-213ENST00000454468 FAHD2AQ96GK7 314 aa10.31□□□□□ -0.76
SMPD4-213ENST00000454468 PFDN5Q99471 154 aa10.31□□□□□ -0.76
SMPD4-213ENST00000454468 NAA60Q9H7X0 242 aa10.31□□□□□ -0.76
SMPD4-213ENST00000454468 BIN3Q9NQY0 253 aa10.31□□□□□ -0.76
SMPD4-213ENST00000454468 TINAGQ9UJW2 476 aa10.31□□□□□ -0.76
SMPD4-213ENST00000454468 RCL1Q9Y2P8 373 aaKnown RBP10.31□□□□□ -0.76
SMPD4-213ENST00000454468 CDX4O14627 284 aaPredicted RBP10.31□□□□□ -0.76
SMPD4-213ENST00000454468 ST8SIA3O43173 380 aa10.31□□□□□ -0.76
SMPD4-213ENST00000454468 PPYP01298 95 aa10.31□□□□□ -0.76
SMPD4-213ENST00000454468 SRSF3P84103 164 aaKnown RBP10.31□□□□□ -0.76
SMPD4-213ENST00000454468 CYB5R2Q6BCY4 276 aa10.31□□□□□ -0.76
SMPD4-213ENST00000454468 CBLN2Q8IUK8 224 aa10.31□□□□□ -0.76
SMPD4-213ENST00000454468 KIRREL1Q96J84 757 aa10.31□□□□□ -0.76
SMPD4-213ENST00000454468 GPR87Q9BY21 358 aa10.31□□□□□ -0.76
SMPD4-213ENST00000454468 LIME1Q9H400 295 aa10.31□□□□□ -0.76
SMPD4-213ENST00000454468 FBXO7Q9Y3I1 522 aa10.31□□□□□ -0.76
SMPD4-213ENST00000454468 FAM74A7A6NL05 159 aa10.31□□□□□ -0.76
SMPD4-213ENST00000454468 IL2RAP01589 272 aa10.31□□□□□ -0.76
SMPD4-213ENST00000454468 SNRNP70P08621 437 aaKnown RBP10.31□□□□□ -0.76
SMPD4-213ENST00000454468 CLDN18P56856 261 aa10.31□□□□□ -0.76
SMPD4-213ENST00000454468 GUCA2BQ16661 112 aa10.31□□□□□ -0.76
SMPD4-213ENST00000454468 FAM74A3Q4VXF1 159 aa10.31□□□□□ -0.76
SMPD4-213ENST00000454468 ZNF826PQ6ZT77 177 aa10.31□□□□□ -0.76
SMPD4-213ENST00000454468 ZFP62Q8NB50 900 aaPredicted RBP10.31□□□□□ -0.76
SMPD4-213ENST00000454468 MRPS24Q96EL2 167 aaKnown RBP10.31□□□□□ -0.76
SMPD4-213ENST00000454468 SUCNR1Q9BXA5 334 aa10.31□□□□□ -0.76
SMPD4-213ENST00000454468 NMES1Q9C002 83 aa10.31□□□□□ -0.76
SMPD4-213ENST00000454468 DNTTIP1Q9H147 329 aa10.31□□□□□ -0.76
SMPD4-213ENST00000454468 NKX2-6A6NCS4 301 aa10.3□□□□□ -0.76
SMPD4-213ENST00000454468 GFRA1P56159 465 aa10.3□□□□□ -0.76
SMPD4-213ENST00000454468 TBC1D28Q2M2D7 210 aa10.3□□□□□ -0.76
SMPD4-213ENST00000454468 ZNF529Q6P280 563 aa10.3□□□□□ -0.76
SMPD4-213ENST00000454468 SLC35G3Q8N808 338 aa10.3□□□□□ -0.76
SMPD4-213ENST00000454468 NKX6-2Q9C056 277 aaPredicted RBP10.3□□□□□ -0.76
SMPD4-213ENST00000454468 MSL2Q9HCI7 577 aa10.3□□□□□ -0.76
SMPD4-213ENST00000454468 COL4A2P08572 1712 aa10.3□□□□□ -0.76
SMPD4-213ENST00000454468 C19orf67A6NJJ6 358 aa10.3□□□□□ -0.76
SMPD4-213ENST00000454468 ADAM20O43506 726 aa10.3□□□□□ -0.76
SMPD4-213ENST00000454468 TIMM8AO60220 97 aaPredicted RBP10.3□□□□□ -0.76
SMPD4-213ENST00000454468 CTSDP07339 412 aaPredicted RBP10.3□□□□□ -0.76
SMPD4-213ENST00000454468 IAPPP10997 89 aa10.3□□□□□ -0.76
SMPD4-213ENST00000454468 SLC25A4P12235 298 aa10.3□□□□□ -0.76
SMPD4-213ENST00000454468 ARR3P36575 388 aa10.3□□□□□ -0.76
SMPD4-213ENST00000454468 NKX2-1P43699 371 aaPredicted RBP10.3□□□□□ -0.76
SMPD4-213ENST00000454468 TBC1D26Q86UD7 250 aa10.3□□□□□ -0.76
SMPD4-213ENST00000454468 FAM89BQ8N5H3 189 aa10.3□□□□□ -0.76
SMPD4-213ENST00000454468 OR10J5Q8NHC4 309 aa10.3□□□□□ -0.76
SMPD4-213ENST00000454468 RNF138Q8WVD3 245 aa10.3□□□□□ -0.76
SMPD4-213ENST00000454468 CNTNAP3Q9BZ76 1288 aa10.3□□□□□ -0.76
SMPD4-213ENST00000454468 PIGMQ9H3S5 423 aa10.3□□□□□ -0.76
SMPD4-213ENST00000454468 RGCCQ9H4X1 137 aa10.3□□□□□ -0.76
SMPD4-213ENST00000454468 DHODHQ02127 395 aa10.3□□□□□ -0.76
SMPD4-213ENST00000454468 C9orf152Q5JTZ5 239 aa10.3□□□□□ -0.76
SMPD4-213ENST00000454468 ERGIC1Q969X5 290 aa10.3□□□□□ -0.76
SMPD4-213ENST00000454468 RBM14Q96PK6 669 aaKnown RBP10.3□□□□□ -0.76
SMPD4-213ENST00000454468 RPS10P5Q9NQ39 176 aa10.3□□□□□ -0.76
SMPD4-213ENST00000454468 TREM2Q9NZC2 230 aa10.3□□□□□ -0.76
SMPD4-213ENST00000454468 DEFB108AA8MXU0 73 aa10.29□□□□□ -0.76
SMPD4-213ENST00000454468 DNPH1O43598 174 aa10.29□□□□□ -0.76
SMPD4-213ENST00000454468 WISP2O76076 250 aa10.29□□□□□ -0.76
SMPD4-213ENST00000454468 LY86O95711 162 aa10.29□□□□□ -0.76
SMPD4-213ENST00000454468 OR13C7P0DN81 318 aa10.29□□□□□ -0.76
SMPD4-213ENST00000454468 GABRA2P47869 451 aa10.29□□□□□ -0.76
SMPD4-213ENST00000454468 RNFT1Q5M7Z0 435 aa10.29□□□□□ -0.76
SMPD4-213ENST00000454468 FAM58AQ8N1B3 248 aa10.29□□□□□ -0.76
SMPD4-213ENST00000454468 FDCSPQ8NFU4 85 aa10.29□□□□□ -0.76
SMPD4-213ENST00000454468 MARVELD3Q96A59 401 aa10.29□□□□□ -0.76
SMPD4-213ENST00000454468 BSCL2Q96G97 398 aaPredicted RBP10.29□□□□□ -0.76
SMPD4-213ENST00000454468 RHOFQ9HBH0 211 aa10.29□□□□□ -0.76
SMPD4-213ENST00000454468 MTCH1Q9NZJ7 389 aa10.29□□□□□ -0.76
SMPD4-213ENST00000454468 RFNGQ9Y644 331 aa10.29□□□□□ -0.76
SMPD4-213ENST00000454468 INTS1Q8N201 2190 aaKnown RBP10.29□□□□□ -0.76
SMPD4-213ENST00000454468 ABCA1O95477 2261 aa10.29□□□□□ -0.76
SMPD4-213ENST00000454468 ZNF318Q5VUA4 2279 aa10.29□□□□□ -0.76
SMPD4-213ENST00000454468 C3orf85A0A1B0GTC6 90 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms