RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 ADARB1P78563 741 aaKnown RBP10□□□□□ -0.81
CPSF4-208ENST00000452047 IL13RA2Q14627 380 aa10□□□□□ -0.81
CPSF4-208ENST00000452047 LRRC36Q1X8D7 754 aa10□□□□□ -0.81
CPSF4-208ENST00000452047 HLA-DRB5Q30154 266 aa10□□□□□ -0.81
CPSF4-208ENST00000452047 PIGYQ3MUY2 71 aa10□□□□□ -0.81
CPSF4-208ENST00000452047 FBLN7Q53RD9 439 aa10□□□□□ -0.81
CPSF4-208ENST00000452047 TMPRSS11AQ6ZMR5 421 aa10□□□□□ -0.81
CPSF4-208ENST00000452047 PACRGLQ8N7B6 248 aa10□□□□□ -0.81
CPSF4-208ENST00000452047 ZNF485Q8NCK3 441 aa10□□□□□ -0.81
CPSF4-208ENST00000452047 OR4D6Q8NGJ1 314 aa10□□□□□ -0.81
CPSF4-208ENST00000452047 OR10K1Q8NGX5 313 aa10□□□□□ -0.81
CPSF4-208ENST00000452047 KIRREL1Q96J84 757 aa10□□□□□ -0.81
CPSF4-208ENST00000452047 NR1H4Q96RI1 486 aaPredicted RBP10□□□□□ -0.81
CPSF4-208ENST00000452047 GPER1Q99527 375 aa10□□□□□ -0.81
CPSF4-208ENST00000452047 NCOR1P1Q9H4R4 102 aa10□□□□□ -0.81
CPSF4-208ENST00000452047 LINC00574Q9H8X3 128 aa10□□□□□ -0.81
CPSF4-208ENST00000452047 BABAM2Q9NXR7 383 aa10□□□□□ -0.81
CPSF4-208ENST00000452047 ING3Q9NXR8 418 aa10□□□□□ -0.81
CPSF4-208ENST00000452047 OR6C3Q9NZP0 311 aa10□□□□□ -0.81
CPSF4-208ENST00000452047 ZNF581Q9P0T4 197 aa10□□□□□ -0.81
CPSF4-208ENST00000452047 CLEC2DQ9UHP7 191 aa10□□□□□ -0.81
CPSF4-208ENST00000452047 TRBV5-5A0A0J9YX44 114 aa9.99□□□□□ -0.81
CPSF4-208ENST00000452047 KBTBD11-OT1A0A1B0GTJ5 212 aa9.99□□□□□ -0.81
CPSF4-208ENST00000452047 LEUTXA8MZ59 168 aa9.99□□□□□ -0.81
CPSF4-208ENST00000452047 LY6LH3BQJ8 138 aa9.99□□□□□ -0.81
CPSF4-208ENST00000452047 BUB1B-PAK6H3BSN5 160 aa9.99□□□□□ -0.81
CPSF4-208ENST00000452047 MAGEB3O15480 346 aa9.99□□□□□ -0.81
CPSF4-208ENST00000452047 FBXO24O75426 580 aa9.99□□□□□ -0.81
CPSF4-208ENST00000452047 OPN1MWP04001 364 aa9.99□□□□□ -0.81
CPSF4-208ENST00000452047 OPN1MW2P0DN77 364 aa9.99□□□□□ -0.81
CPSF4-208ENST00000452047 OPN1MW3P0DN78 364 aa9.99□□□□□ -0.81
CPSF4-208ENST00000452047 GLP1RP43220 463 aa9.99□□□□□ -0.81
CPSF4-208ENST00000452047 TMEM95Q3KNT9 176 aa9.99□□□□□ -0.81
CPSF4-208ENST00000452047 PAN3Q58A45 887 aaKnown RBP9.99□□□□□ -0.81
CPSF4-208ENST00000452047 NHLRC3Q5JS37 347 aa9.99□□□□□ -0.81
CPSF4-208ENST00000452047 RSBN1Q5VWQ0 802 aaPredicted RBP9.99□□□□□ -0.81
CPSF4-208ENST00000452047 TTC23Q5W5X9 447 aa9.99□□□□□ -0.81
CPSF4-208ENST00000452047 DMKNQ6E0U4 476 aaPredicted RBP9.99□□□□□ -0.81
CPSF4-208ENST00000452047 C16orf82Q7Z2V1 217 aa9.99□□□□□ -0.81
CPSF4-208ENST00000452047 SATL1Q86VE3 508 aa9.99□□□□□ -0.81
CPSF4-208ENST00000452047 OR13A1Q8NGR1 328 aa9.99□□□□□ -0.81
CPSF4-208ENST00000452047 OR13C5Q8NGS8 318 aa9.99□□□□□ -0.81
CPSF4-208ENST00000452047 OR52N1Q8NH53 320 aa9.99□□□□□ -0.81
CPSF4-208ENST00000452047 CYGBQ8WWM9 190 aa9.99□□□□□ -0.81
CPSF4-208ENST00000452047 ORAI1Q96D31 301 aa9.99□□□□□ -0.81
CPSF4-208ENST00000452047 FAM192AQ9GZU8 254 aa9.99□□□□□ -0.81
CPSF4-208ENST00000452047 TMEM138Q9NPI0 162 aa9.99□□□□□ -0.81
CPSF4-208ENST00000452047 C8orf4Q9NR00 106 aa9.99□□□□□ -0.81
CPSF4-208ENST00000452047 IL36GQ9NZH8 169 aa9.99□□□□□ -0.81
CPSF4-208ENST00000452047 KIF25Q9UIL4 384 aa9.99□□□□□ -0.81
CPSF4-208ENST00000452047 ZNF281Q9Y2X9 895 aa9.99□□□□□ -0.81
CPSF4-208ENST00000452047 EXOSC1Q9Y3B2 195 aaKnown RBP9.99□□□□□ -0.81
CPSF4-208ENST00000452047 MEIKINA0A087WXM9 373 aa9.98□□□□□ -0.81
CPSF4-208ENST00000452047 ADARB2-AS1A8MUL3 147 aa9.98□□□□□ -0.81
CPSF4-208ENST00000452047 CDRT1O95170 752 aa9.98□□□□□ -0.81
CPSF4-208ENST00000452047 CD28P10747 220 aa9.98□□□□□ -0.81
CPSF4-208ENST00000452047 IGFBP3P17936 291 aaPredicted RBP9.98□□□□□ -0.81
CPSF4-208ENST00000452047 MYL12AP19105 171 aa9.98□□□□□ -0.81
CPSF4-208ENST00000452047 CD24P25063 80 aa9.98□□□□□ -0.81
CPSF4-208ENST00000452047 KCNJ3P48549 501 aa9.98□□□□□ -0.81
CPSF4-208ENST00000452047 RPS11P62280 158 aaKnown RBP eCLIP9.98□□□□□ -0.81
CPSF4-208ENST00000452047 PPP3R1P63098 170 aa9.98□□□□□ -0.81
CPSF4-208ENST00000452047 RIPK1Q13546 671 aa9.98□□□□□ -0.81
CPSF4-208ENST00000452047 RCN1Q15293 331 aa9.98□□□□□ -0.81
CPSF4-208ENST00000452047 RSU1Q15404 277 aa9.98□□□□□ -0.81
CPSF4-208ENST00000452047 TPTE2P1Q5T6R2 138 aa9.98□□□□□ -0.81
CPSF4-208ENST00000452047 DDI2Q5TDH0 399 aa9.98□□□□□ -0.81
CPSF4-208ENST00000452047 LAIR2Q6ISS4 152 aa9.98□□□□□ -0.81
CPSF4-208ENST00000452047 C1QL4Q86Z23 238 aa9.98□□□□□ -0.81
CPSF4-208ENST00000452047 SETD9Q8NE22 299 aa9.98□□□□□ -0.81
CPSF4-208ENST00000452047 PLPPR1Q8TBJ4 325 aa9.98□□□□□ -0.81
CPSF4-208ENST00000452047 GHSRQ92847 366 aa9.98□□□□□ -0.81
CPSF4-208ENST00000452047 CREB3L1Q96BA8 519 aa9.98□□□□□ -0.81
CPSF4-208ENST00000452047 TMEM80Q96HE8 168 aa9.98□□□□□ -0.81
CPSF4-208ENST00000452047 PGLYRP3Q96LB9 341 aa9.98□□□□□ -0.81
CPSF4-208ENST00000452047 OCSTAMPQ9BR26 566 aa9.98□□□□□ -0.81
CPSF4-208ENST00000452047 IFT22Q9H7X7 185 aa9.98□□□□□ -0.81
CPSF4-208ENST00000452047 LIN7BQ9HAP6 207 aa9.98□□□□□ -0.81
CPSF4-208ENST00000452047 CALYQ9NYX4 217 aa9.98□□□□□ -0.81
CPSF4-208ENST00000452047 MAGEA13PA6NCF6 341 aa9.97□□□□□ -0.81
CPSF4-208ENST00000452047 NPIPB11E5RHQ5 1161 aa9.97□□□□□ -0.81
CPSF4-208ENST00000452047 TOR1AO14656 332 aa9.97□□□□□ -0.81
CPSF4-208ENST00000452047 HTR3BO95264 441 aa9.97□□□□□ -0.81
CPSF4-208ENST00000452047 IL1AP01583 271 aa9.97□□□□□ -0.81
CPSF4-208ENST00000452047 AMY1AP04745 511 aa9.97□□□□□ -0.81
CPSF4-208ENST00000452047 AMY2AP04746 511 aa9.97□□□□□ -0.81
CPSF4-208ENST00000452047 GNAO1P09471 354 aa9.97□□□□□ -0.81
CPSF4-208ENST00000452047 NFYBP25208 207 aa9.97□□□□□ -0.81
CPSF4-208ENST00000452047 BDKRB2P30411 391 aa9.97□□□□□ -0.81
CPSF4-208ENST00000452047 BRS3P32247 399 aa9.97□□□□□ -0.81
CPSF4-208ENST00000452047 ZNF93P35789 620 aaPredicted RBP9.97□□□□□ -0.81
CPSF4-208ENST00000452047 CEACAM3P40198 252 aa9.97□□□□□ -0.81
CPSF4-208ENST00000452047 VDAC2P45880 294 aaPredicted RBP9.97□□□□□ -0.81
CPSF4-208ENST00000452047 RBM11P57052 281 aaKnown RBP9.97□□□□□ -0.81
CPSF4-208ENST00000452047 NDUFA11Q86Y39 141 aa9.97□□□□□ -0.81
CPSF4-208ENST00000452047 LYG1Q8N1E2 194 aa9.97□□□□□ -0.81
CPSF4-208ENST00000452047 DHRSXQ8N5I4 330 aa9.97□□□□□ -0.81
CPSF4-208ENST00000452047 ZFP41Q8N8Y5 198 aa9.97□□□□□ -0.81
CPSF4-208ENST00000452047 ZNF565Q8N9K5 539 aa9.97□□□□□ -0.81
CPSF4-208ENST00000452047 OR9G1Q8NH87 305 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms