RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, human

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HCG18-238	ENST00000449544	SPIN2A	Q99865	258 aa		7.16	□□□□□ -1.26
HCG18-238	ENST00000449544	SPIN2B	Q9BPZ2	258 aa		7.16	□□□□□ -1.26
HCG18-238	ENST00000449544	TMEM208	Q9BTX3	173 aa		7.16	□□□□□ -1.26
HCG18-238	ENST00000449544	PRRC2C	Q9Y520	2896 aa	Known RBP	7.16	□□□□□ -1.26
HCG18-238	ENST00000449544	TMEM178B	H3BS89	294 aa		7.15	□□□□□ -1.26
HCG18-238	ENST00000449544	EFNB3	Q15768	340 aa		7.15	□□□□□ -1.26
HCG18-238	ENST00000449544	TMEM155	Q4W5P6	130 aa		7.15	□□□□□ -1.26
HCG18-238	ENST00000449544	UNQ5815/PRO19632	Q6UWF5	114 aa		7.15	□□□□□ -1.26
HCG18-238	ENST00000449544	ANKRD13B	Q86YJ7	626 aa		7.15	□□□□□ -1.26
HCG18-238	ENST00000449544	ZFAND1	Q8TCF1	268 aa		7.15	□□□□□ -1.26
HCG18-238	ENST00000449544	UPRT	Q96BW1	309 aa		7.15	□□□□□ -1.26
HCG18-238	ENST00000449544	WDFY2	Q96P53	400 aa		7.15	□□□□□ -1.26
HCG18-238	ENST00000449544	NECAP2	Q9NVZ3	263 aa		7.15	□□□□□ -1.26
HCG18-238	ENST00000449544	CLEC2D	Q9UHP7	191 aa		7.15	□□□□□ -1.26
HCG18-238	ENST00000449544	SCN8A	Q9UQD0	1980 aa		7.15	□□□□□ -1.26
HCG18-238	ENST00000449544	CHD9	Q3L8U1	2897 aa		7.15	□□□□□ -1.26
HCG18-238	ENST00000449544		M0QZK8	103 aa		7.15	□□□□□ -1.26
HCG18-238	ENST00000449544	KRTAP10-9	P60411	292 aa		7.15	□□□□□ -1.26
HCG18-238	ENST00000449544	CD300LD	Q6UXZ3	194 aa		7.15	□□□□□ -1.26
HCG18-238	ENST00000449544	SEM1	Q6ZVN7	128 aa		7.15	□□□□□ -1.26
HCG18-238	ENST00000449544	C10orf105	Q8TEF2	133 aa		7.15	□□□□□ -1.26
HCG18-238	ENST00000449544	ORAI1	Q96D31	301 aa		7.15	□□□□□ -1.26
HCG18-238	ENST00000449544	MRM2	Q9UI43	246 aa	Known RBP	7.15	□□□□□ -1.26
HCG18-238	ENST00000449544	IGKV3-7	A0A075B6H7	116 aa		7.15	□□□□□ -1.27
HCG18-238	ENST00000449544	C10orf142	B7Z368	130 aa		7.15	□□□□□ -1.27
HCG18-238	ENST00000449544	KCNAB3	O43448	404 aa		7.15	□□□□□ -1.27
HCG18-238	ENST00000449544	FCGR3B	O75015	233 aa		7.15	□□□□□ -1.27
HCG18-238	ENST00000449544	CA11	O75493	328 aa		7.15	□□□□□ -1.27
HCG18-238	ENST00000449544	SLC22A5	O76082	557 aa		7.15	□□□□□ -1.27
HCG18-238	ENST00000449544	ZFPL1	O95159	310 aa		7.15	□□□□□ -1.27
HCG18-238	ENST00000449544	GNAO1	P09471	354 aa		7.15	□□□□□ -1.27
HCG18-238	ENST00000449544	ZNF554	Q86TJ5	538 aa		7.15	□□□□□ -1.27
HCG18-238	ENST00000449544	TNRC6A	Q8NDV7	1962 aa	Known RBP	7.15	□□□□□ -1.27
HCG18-238	ENST00000449544	OR10AC1	Q8NH08	325 aa		7.15	□□□□□ -1.27
HCG18-238	ENST00000449544	VSTM2A	Q8TAG5	236 aa		7.15	□□□□□ -1.27
HCG18-238	ENST00000449544	FGFBP3	Q8TAT2	258 aa		7.15	□□□□□ -1.27
HCG18-238	ENST00000449544	FLYWCH2	Q96CP2	140 aa	Known RBP	7.15	□□□□□ -1.27
HCG18-238	ENST00000449544	GPR61	Q9BZJ8	451 aa		7.15	□□□□□ -1.27
HCG18-238	ENST00000449544	PKIB	Q9C010	78 aa		7.15	□□□□□ -1.27
HCG18-238	ENST00000449544	PIPOX	Q9P0Z9	390 aa		7.15	□□□□□ -1.27
HCG18-238	ENST00000449544	IGKV1D-43	A0A0B4J1Z2	117 aa		7.15	□□□□□ -1.27
HCG18-238	ENST00000449544	IGHM	P01871	453 aa		7.15	□□□□□ -1.27
HCG18-238	ENST00000449544	OPRL1	P41146	370 aa		7.15	□□□□□ -1.27
HCG18-238	ENST00000449544	PAFAH1B2	P68402	229 aa		7.15	□□□□□ -1.27
HCG18-238	ENST00000449544	RBPMS2	Q6ZRY4	209 aa	Known RBP	7.15	□□□□□ -1.27
HCG18-238	ENST00000449544	BEST4	Q8NFU0	473 aa		7.15	□□□□□ -1.27
HCG18-238	ENST00000449544	OR13C5	Q8NGS8	318 aa		7.15	□□□□□ -1.27
HCG18-238	ENST00000449544	OR2T10	Q8NGZ9	312 aa		7.15	□□□□□ -1.27
HCG18-238	ENST00000449544	CHPT1	Q8WUD6	406 aa		7.15	□□□□□ -1.27
HCG18-238	ENST00000449544	ADTRP	Q96IZ2	230 aa		7.15	□□□□□ -1.27
HCG18-238	ENST00000449544	GCM1	Q9NP62	436 aa		7.15	□□□□□ -1.27
HCG18-238	ENST00000449544	FABP7	O15540	132 aa		7.14	□□□□□ -1.27
HCG18-238	ENST00000449544	EPHA2	P29317	976 aa		7.14	□□□□□ -1.27
HCG18-238	ENST00000449544	MPV17L	Q2QL34	196 aa		7.14	□□□□□ -1.27
HCG18-238	ENST00000449544	SIGLECL1	Q8N7X8	197 aa		7.14	□□□□□ -1.27
HCG18-238	ENST00000449544	RAB2B	Q8WUD1	216 aa		7.14	□□□□□ -1.27
HCG18-238	ENST00000449544	MAFIP	Q8WZ33	124 aa		7.14	□□□□□ -1.27
HCG18-238	ENST00000449544	ADGRL4	Q9HBW9	690 aa		7.14	□□□□□ -1.27
HCG18-238	ENST00000449544	SHISA9	B4DS77	424 aa		7.14	□□□□□ -1.27
HCG18-238	ENST00000449544	ETV1	P50549	477 aa		7.14	□□□□□ -1.27
HCG18-238	ENST00000449544	PPP5C	P53041	499 aa		7.14	□□□□□ -1.27
HCG18-238	ENST00000449544	PAQR4	Q8N4S7	273 aa	Predicted RBP	7.14	□□□□□ -1.27
HCG18-238	ENST00000449544	OR52N4	Q8NGI2	321 aa		7.14	□□□□□ -1.27
HCG18-238	ENST00000449544	OR56B4	Q8NH76	319 aa		7.14	□□□□□ -1.27
HCG18-238	ENST00000449544	MRPL13	Q9BYD1	178 aa	Known RBP	7.14	□□□□□ -1.27
HCG18-238	ENST00000449544	TMEM165	Q9HC07	324 aa		7.14	□□□□□ -1.27
HCG18-238	ENST00000449544	CALY	Q9NYX4	217 aa		7.14	□□□□□ -1.27
HCG18-238	ENST00000449544	MFGE8	Q08431	387 aa	Predicted RBP	7.14	□□□□□ -1.27
HCG18-238	ENST00000449544	PHLDA2	Q53GA4	152 aa		7.14	□□□□□ -1.27
HCG18-238	ENST00000449544	MBNL2	Q5VZF2	373 aa	Known RBP	7.14	□□□□□ -1.27
HCG18-238	ENST00000449544	GCSAM	Q8N6F7	178 aa		7.14	□□□□□ -1.27
HCG18-238	ENST00000449544	HARBI1	Q96MB7	349 aa		7.14	□□□□□ -1.27
HCG18-238	ENST00000449544	TMEM56	Q96MV1	263 aa		7.14	□□□□□ -1.27
HCG18-238	ENST00000449544	FUZ	Q9BT04	418 aa		7.14	□□□□□ -1.27
HCG18-238	ENST00000449544	ISG20L2	Q9H9L3	353 aa	Known RBP	7.14	□□□□□ -1.27
HCG18-238	ENST00000449544	MMP26	Q9NRE1	261 aa		7.14	□□□□□ -1.27
HCG18-238	ENST00000449544	TMEM129	A0AVI4	362 aa		7.13	□□□□□ -1.27
HCG18-238	ENST00000449544	TTR	P02766	147 aa		7.13	□□□□□ -1.27
HCG18-238	ENST00000449544	SNRPB	P14678	240 aa	Known RBP	7.13	□□□□□ -1.27
HCG18-238	ENST00000449544	DCTD	P32321	178 aa		7.13	□□□□□ -1.27
HCG18-238	ENST00000449544	P2RX3	P56373	397 aa		7.13	□□□□□ -1.27
HCG18-238	ENST00000449544	LOXL3	P58215	753 aa		7.13	□□□□□ -1.27
HCG18-238	ENST00000449544	GRAMD2B	Q96HH9	432 aa		7.13	□□□□□ -1.27
HCG18-238	ENST00000449544	C1QTNF5	Q9BXJ0	243 aa		7.13	□□□□□ -1.27
HCG18-238	ENST00000449544	MRPL22	Q9NWU5	206 aa	Known RBP	7.13	□□□□□ -1.27
HCG18-238	ENST00000449544	RSL24D1	Q9UHA3	163 aa	Known RBP	7.13	□□□□□ -1.27
HCG18-238	ENST00000449544	TCRBV5S2	A0A599	114 aa		7.13	□□□□□ -1.27
HCG18-238	ENST00000449544	CCDC182	A6NF36	153 aa		7.13	□□□□□ -1.27
HCG18-238	ENST00000449544	SLC22A1	O15245	554 aa		7.13	□□□□□ -1.27
HCG18-238	ENST00000449544	CRYZL1	O95825	349 aa		7.13	□□□□□ -1.27
HCG18-238	ENST00000449544	OR2H2	O95918	312 aa		7.13	□□□□□ -1.27
HCG18-238	ENST00000449544	CSF1	P09603	554 aa		7.13	□□□□□ -1.27
HCG18-238	ENST00000449544	ZNF250	P15622	560 aa		7.13	□□□□□ -1.27
HCG18-238	ENST00000449544	ANXA7	P20073	488 aa	Known RBP	7.13	□□□□□ -1.27
HCG18-238	ENST00000449544	MS4A10	Q96PG2	267 aa		7.13	□□□□□ -1.27
HCG18-238	ENST00000449544	FAAP24	Q9BTP7	215 aa		7.13	□□□□□ -1.27
HCG18-238	ENST00000449544	ITPR3	Q14573	2671 aa		7.13	□□□□□ -1.27
HCG18-238	ENST00000449544		A0A1B0GUS0	222 aa		7.13	□□□□□ -1.27
HCG18-238	ENST00000449544	ZNF729	A6NN14	1252 aa	Predicted RBP	7.13	□□□□□ -1.27
HCG18-238	ENST00000449544	GEMIN2	O14893	280 aa	Known RBP	7.13	□□□□□ -1.27

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