RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 ZNF367Q7RTV3 350 aa4.84□□□□□ -1.63
CDC42BPA-209ENST00000448940 ANGPTL5Q86XS5 388 aa4.84□□□□□ -1.63
CDC42BPA-209ENST00000448940 BEND2Q8NDZ0 799 aa4.84□□□□□ -1.63
CDC42BPA-209ENST00000448940 OR1S1Q8NH92 325 aa4.84□□□□□ -1.63
CDC42BPA-209ENST00000448940 NDFIP1Q9BT67 221 aa4.84□□□□□ -1.63
CDC42BPA-209ENST00000448940 GSX1Q9H4S2 264 aaPredicted RBP4.84□□□□□ -1.63
CDC42BPA-209ENST00000448940 A0A0G2JLM5 398 aa4.84□□□□□ -1.63
CDC42BPA-209ENST00000448940 PSG4Q00888 419 aa4.84□□□□□ -1.63
CDC42BPA-209ENST00000448940 GAMTQ14353 236 aa4.84□□□□□ -1.63
CDC42BPA-209ENST00000448940 OR2B11Q5JQS5 317 aa4.84□□□□□ -1.63
CDC42BPA-209ENST00000448940 ARL6IP6Q8N6S5 226 aa4.84□□□□□ -1.63
CDC42BPA-209ENST00000448940 MZB1Q8WU39 189 aa4.84□□□□□ -1.63
CDC42BPA-209ENST00000448940 TSPAN32Q96QS1 320 aa4.84□□□□□ -1.63
CDC42BPA-209ENST00000448940 SLC25A33Q9BSK2 321 aa4.84□□□□□ -1.63
CDC42BPA-209ENST00000448940 SLC25A37Q9NYZ2 338 aa4.84□□□□□ -1.63
CDC42BPA-209ENST00000448940 NAGKQ9UJ70 344 aa4.84□□□□□ -1.63
CDC42BPA-209ENST00000448940 ACOD1A6NK06 481 aa4.84□□□□□ -1.64
CDC42BPA-209ENST00000448940 DEFB108AA8MXU0 73 aa4.84□□□□□ -1.64
CDC42BPA-209ENST00000448940 H0Y980 276 aa4.84□□□□□ -1.64
CDC42BPA-209ENST00000448940 H7C417 338 aa4.84□□□□□ -1.64
CDC42BPA-209ENST00000448940 M0QYG6 137 aa4.84□□□□□ -1.64
CDC42BPA-209ENST00000448940 PITX3O75364 302 aa4.84□□□□□ -1.64
CDC42BPA-209ENST00000448940 CLN5O75503 358 aa4.84□□□□□ -1.64
CDC42BPA-209ENST00000448940 TRGV3P03979 118 aa4.84□□□□□ -1.64
CDC42BPA-209ENST00000448940 KITLGP21583 273 aa4.84□□□□□ -1.64
CDC42BPA-209ENST00000448940 HTR1FP30939 366 aa4.84□□□□□ -1.64
CDC42BPA-209ENST00000448940 SLC25A1P53007 311 aa4.84□□□□□ -1.64
CDC42BPA-209ENST00000448940 OR10A3P58181 314 aa4.84□□□□□ -1.64
CDC42BPA-209ENST00000448940 IGFL2Q6UWQ7 119 aa4.84□□□□□ -1.64
CDC42BPA-209ENST00000448940 OR1M1Q8NGA1 313 aa4.84□□□□□ -1.64
CDC42BPA-209ENST00000448940 RNF183Q96D59 192 aa4.84□□□□□ -1.64
CDC42BPA-209ENST00000448940 PDCD1LG2Q9BQ51 273 aa4.84□□□□□ -1.64
CDC42BPA-209ENST00000448940 ST3GAL6Q9Y274 331 aa4.84□□□□□ -1.64
CDC42BPA-209ENST00000448940 PTBP3O95758 552 aaKnown RBP4.84□□□□□ -1.64
CDC42BPA-209ENST00000448940 IL11P20809 199 aa4.84□□□□□ -1.64
CDC42BPA-209ENST00000448940 RORCP51449 518 aa4.84□□□□□ -1.64
CDC42BPA-209ENST00000448940 ACTBP60709 375 aa4.84□□□□□ -1.64
CDC42BPA-209ENST00000448940 H2BFWTQ7Z2G1 175 aa4.84□□□□□ -1.64
CDC42BPA-209ENST00000448940 STPG3Q8N7X2 389 aa4.84□□□□□ -1.64
CDC42BPA-209ENST00000448940 OR8H1Q8NGG4 311 aa4.84□□□□□ -1.64
CDC42BPA-209ENST00000448940 OR4D10Q8NGI6 311 aa4.84□□□□□ -1.64
CDC42BPA-209ENST00000448940 RAB3CQ96E17 227 aa4.84□□□□□ -1.64
CDC42BPA-209ENST00000448940 PELI1Q96FA3 418 aa4.84□□□□□ -1.64
CDC42BPA-209ENST00000448940 EAF1Q96JC9 268 aaPredicted RBP4.84□□□□□ -1.64
CDC42BPA-209ENST00000448940 MFFQ9GZY8 342 aa4.84□□□□□ -1.64
CDC42BPA-209ENST00000448940 RANBP3Q9H6Z4 567 aaPredicted RBP4.84□□□□□ -1.64
CDC42BPA-209ENST00000448940 TGFBR3LH3BV60 316 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 CDK1P06493 297 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 AZGP1P25311 298 aaKnown RBP4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 APOOLQ6UXV4 268 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 STOML3Q8TAV4 291 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 FRZBQ92765 325 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 BCL2L2Q92843 193 aaPredicted RBP4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 MGLLQ99685 303 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 CABLES2Q9BTV7 478 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 CLCF1Q9UBD9 225 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 RAB26Q9ULW5 256 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 SIGLEC7Q9Y286 467 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 SLC16A6O15403 523 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 IFNA5P01569 189 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 GZMHP20718 246 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 HTR2CP28335 458 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 REG1BP48304 166 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 C6orf52Q5T4I8 152 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 OR10K2Q6IF99 312 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 OR4B1Q8NGF8 309 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 OTOSQ8NHW6 89 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 GLYATL2Q8WU03 294 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 RNF166Q96A37 237 aaPredicted RBP4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 C20orf27Q9GZN8 174 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 MMP27Q9H306 513 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 WIPI2Q9Y4P8 454 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 TET2Q6N021 2002 aaPredicted RBP4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 ZNF705GA8MUZ8 300 aaPredicted RBP4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 CCNKO75909 580 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 CDRT1O95170 752 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 RD3LP0DJH9 198 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 ATF1P18846 271 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 GNMTQ14749 295 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 ATXN7L3Q14CW9 347 aaPredicted RBP4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 MAJINQ3KP22 176 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 ZNF260Q3ZCT1 412 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 AKR1C8PQ5T2L2 129 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 ATPAF1Q5TC12 328 aaPredicted RBP4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 ACBD4Q8NC06 268 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 OR6M1Q8NGM8 313 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 C2CD4CQ8TF44 421 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 RPL3LQ92901 407 aaKnown RBP4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 DVL3Q92997 716 aaPredicted RBP4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 SPIN2AQ99865 258 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 SPIN2BQ9BPZ2 258 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 NMES1Q9C002 83 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 ZMAT3Q9HA38 289 aaKnown RBP4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 HELZP42694 1942 aaKnown RBP4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 MUC1P15941 1255 aaPredicted RBP4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 PRSS3P35030 304 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 ERVFC1-1P60608 527 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 ZNF91Q05481 1191 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 ATP5G2Q06055 141 aa4.83□□□□□ -1.64
CDC42BPA-209ENST00000448940 MGAT2Q10469 447 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms