RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 TAF1P21675 1872 aa6.86□□□□□ -1.31
NEDD9-204ENST00000448183 LAMB2P55268 1798 aa6.86□□□□□ -1.31
NEDD9-204ENST00000448183 GEMIN2O14893 280 aaKnown RBP6.86□□□□□ -1.31
NEDD9-204ENST00000448183 CSN3P07498 182 aa6.86□□□□□ -1.31
NEDD9-204ENST00000448183 DRD3P35462 400 aa6.86□□□□□ -1.31
NEDD9-204ENST00000448183 GZMMP51124 257 aa6.86□□□□□ -1.31
NEDD9-204ENST00000448183 MMP16P51512 607 aa6.86□□□□□ -1.31
NEDD9-204ENST00000448183 GAMTQ14353 236 aa6.86□□□□□ -1.31
NEDD9-204ENST00000448183 HLA-BQ31612 363 aa6.86□□□□□ -1.31
NEDD9-204ENST00000448183 TMEM65Q6PI78 240 aa6.86□□□□□ -1.31
NEDD9-204ENST00000448183 CADM4Q8NFZ8 388 aa6.86□□□□□ -1.31
NEDD9-204ENST00000448183 LPAR5Q9H1C0 372 aa6.86□□□□□ -1.31
NEDD9-204ENST00000448183 GHITMQ9H3K2 345 aa6.86□□□□□ -1.31
NEDD9-204ENST00000448183 FAM60AQ9NP50 221 aa6.86□□□□□ -1.31
NEDD9-204ENST00000448183 CA10Q9NS85 328 aa6.86□□□□□ -1.31
NEDD9-204ENST00000448183 PLA2G3Q9NZ20 509 aa6.86□□□□□ -1.31
NEDD9-204ENST00000448183 TRGV8A0A0C4DH27 118 aa6.85□□□□□ -1.31
NEDD9-204ENST00000448183 LIPT2A6NK58 231 aa6.85□□□□□ -1.31
NEDD9-204ENST00000448183 DEDDO75618 318 aa6.85□□□□□ -1.31
NEDD9-204ENST00000448183 NTN1O95631 604 aa6.85□□□□□ -1.31
NEDD9-204ENST00000448183 ITGBL1O95965 494 aaPredicted RBP6.85□□□□□ -1.31
NEDD9-204ENST00000448183 ORM2P19652 201 aa6.85□□□□□ -1.31
NEDD9-204ENST00000448183 GALNSP34059 522 aa6.85□□□□□ -1.31
NEDD9-204ENST00000448183 BMI1P35226 326 aa6.85□□□□□ -1.31
NEDD9-204ENST00000448183 KHDC3LQ587J8 217 aa6.85□□□□□ -1.31
NEDD9-204ENST00000448183 ZNF766Q5HY98 468 aa6.85□□□□□ -1.31
NEDD9-204ENST00000448183 TMEM211Q6ICI0 200 aa6.85□□□□□ -1.31
NEDD9-204ENST00000448183 LYZL2Q7Z4W2 148 aa6.85□□□□□ -1.31
NEDD9-204ENST00000448183 NRIP2Q9BQI9 281 aa6.85□□□□□ -1.31
NEDD9-204ENST00000448183 HES7Q9BYE0 225 aa6.85□□□□□ -1.31
NEDD9-204ENST00000448183 CCL28Q9NRJ3 127 aa6.85□□□□□ -1.31
NEDD9-204ENST00000448183 SLX4Q8IY92 1834 aa6.85□□□□□ -1.31
NEDD9-204ENST00000448183 A0A1W2PR80 420 aa6.85□□□□□ -1.31
NEDD9-204ENST00000448183 PDE6DO43924 150 aa6.85□□□□□ -1.31
NEDD9-204ENST00000448183 SEMA7AO75326 666 aa6.85□□□□□ -1.31
NEDD9-204ENST00000448183 ACTL6AO96019 429 aa6.85□□□□□ -1.31
NEDD9-204ENST00000448183 CRYABP02511 175 aaKnown RBP6.85□□□□□ -1.31
NEDD9-204ENST00000448183 NMBP08949 121 aa6.85□□□□□ -1.31
NEDD9-204ENST00000448183 ZNF83P51522 516 aa6.85□□□□□ -1.31
NEDD9-204ENST00000448183 B2MP61769 119 aa6.85□□□□□ -1.31
NEDD9-204ENST00000448183 MRPS11P82912 194 aaKnown RBP6.85□□□□□ -1.31
NEDD9-204ENST00000448183 SKP2Q13309 424 aa6.85□□□□□ -1.31
NEDD9-204ENST00000448183 PSG5Q15238 335 aa6.85□□□□□ -1.31
NEDD9-204ENST00000448183 OVCH2Q7RTZ1 564 aa6.85□□□□□ -1.31
NEDD9-204ENST00000448183 TMEM251Q8N6I4 163 aa6.85□□□□□ -1.31
NEDD9-204ENST00000448183 CHAC2Q8WUX2 184 aa6.85□□□□□ -1.31
NEDD9-204ENST00000448183 IER2Q9BTL4 223 aa6.85□□□□□ -1.31
NEDD9-204ENST00000448183 ZNF552Q9H707 407 aaPredicted RBP6.85□□□□□ -1.31
NEDD9-204ENST00000448183 CTXND1A0A1B0GTU2 59 aa6.85□□□□□ -1.31
NEDD9-204ENST00000448183 OR2M5A3KFT3 312 aa6.85□□□□□ -1.31
NEDD9-204ENST00000448183 NKX2-6A6NCS4 301 aa6.85□□□□□ -1.31
NEDD9-204ENST00000448183 PAGE4O60829 102 aa6.85□□□□□ -1.31
NEDD9-204ENST00000448183 ADAM11O75078 769 aa6.85□□□□□ -1.31
NEDD9-204ENST00000448183 RPLP1P05386 114 aaKnown RBP6.85□□□□□ -1.31
NEDD9-204ENST00000448183 ATP6V0CP27449 155 aa6.85□□□□□ -1.31
NEDD9-204ENST00000448183 PRSS12P56730 875 aa6.85□□□□□ -1.31
NEDD9-204ENST00000448183 PPP1CAP62136 330 aa6.85□□□□□ -1.31
NEDD9-204ENST00000448183 NSUN5P2Q63ZY6 315 aa6.85□□□□□ -1.31
NEDD9-204ENST00000448183 ADAD2Q8NCV1 583 aaKnown RBP6.85□□□□□ -1.31
NEDD9-204ENST00000448183 MRPL30Q8TCC3 161 aaKnown RBP6.85□□□□□ -1.31
NEDD9-204ENST00000448183 RNF133Q8WVZ7 376 aa6.85□□□□□ -1.31
NEDD9-204ENST00000448183 PTX4Q96A99 478 aa6.85□□□□□ -1.31
NEDD9-204ENST00000448183 SF3B5Q9BWJ5 86 aaKnown RBP6.85□□□□□ -1.31
NEDD9-204ENST00000448183 SCN9AQ15858 1988 aa6.85□□□□□ -1.31
NEDD9-204ENST00000448183 F5H697 171 aa6.84□□□□□ -1.31
NEDD9-204ENST00000448183 CCL2P13500 99 aa6.84□□□□□ -1.31
NEDD9-204ENST00000448183 GUSBP11Q6P575 273 aa6.84□□□□□ -1.31
NEDD9-204ENST00000448183 TMEM116Q8NCL8 245 aa6.84□□□□□ -1.31
NEDD9-204ENST00000448183 OR4P4Q8NGL7 312 aa6.84□□□□□ -1.31
NEDD9-204ENST00000448183 MEGF10Q96KG7 1140 aa6.84□□□□□ -1.31
NEDD9-204ENST00000448183 CXXC4Q9H2H0 198 aa6.84□□□□□ -1.31
NEDD9-204ENST00000448183 ST6GALNAC2Q9UJ37 374 aa6.84□□□□□ -1.31
NEDD9-204ENST00000448183 SCN1AP35498 2009 aa6.84□□□□□ -1.31
NEDD9-204ENST00000448183 A0A1B0GU03 582 aa6.84□□□□□ -1.31
NEDD9-204ENST00000448183 C2CD4DB7Z1M9 353 aa6.84□□□□□ -1.31
NEDD9-204ENST00000448183 GOSR1O95249 250 aa6.84□□□□□ -1.31
NEDD9-204ENST00000448183 TMIGD3P0DMS9 266 aaPredicted RBP6.84□□□□□ -1.31
NEDD9-204ENST00000448183 ACAA2P42765 397 aaKnown RBP6.84□□□□□ -1.31
NEDD9-204ENST00000448183 MRPL54Q6P161 138 aaKnown RBP6.84□□□□□ -1.31
NEDD9-204ENST00000448183 UBALD2Q8IYN6 164 aa6.84□□□□□ -1.31
NEDD9-204ENST00000448183 C5orf17Q8NAS9 161 aa6.84□□□□□ -1.31
NEDD9-204ENST00000448183 OR1L6Q8NGR2 347 aa6.84□□□□□ -1.31
NEDD9-204ENST00000448183 GPA33Q99795 319 aa6.84□□□□□ -1.31
NEDD9-204ENST00000448183 MAP1LC3CQ9BXW4 147 aa6.84□□□□□ -1.31
NEDD9-204ENST00000448183 RCC2Q9P258 522 aaKnown RBP6.84□□□□□ -1.31
NEDD9-204ENST00000448183 SH2D7A6NKC9 451 aaPredicted RBP6.84□□□□□ -1.31
NEDD9-204ENST00000448183 SNURFLB1AK76 121 aa6.84□□□□□ -1.31
NEDD9-204ENST00000448183 LINC01565O15544 149 aa6.84□□□□□ -1.31
NEDD9-204ENST00000448183 POU2F2P09086 479 aa6.84□□□□□ -1.31
NEDD9-204ENST00000448183 MEOX1P50221 254 aa6.84□□□□□ -1.31
NEDD9-204ENST00000448183 EFNB2P52799 333 aa6.84□□□□□ -1.31
NEDD9-204ENST00000448183 LYZP61626 148 aa6.84□□□□□ -1.31
NEDD9-204ENST00000448183 ZNF273Q14593 569 aa6.84□□□□□ -1.31
NEDD9-204ENST00000448183 RHBDD2Q6NTF9 364 aa6.84□□□□□ -1.31
NEDD9-204ENST00000448183 HOGA1Q86XE5 327 aa6.84□□□□□ -1.31
NEDD9-204ENST00000448183 IGSF23A1L1A6 192 aa6.84□□□□□ -1.31
NEDD9-204ENST00000448183 OOEPA6NGQ2 149 aa6.84□□□□□ -1.31
NEDD9-204ENST00000448183 ZNF207O43670 478 aaKnown RBP6.84□□□□□ -1.31
NEDD9-204ENST00000448183 HAND1O96004 215 aa6.84□□□□□ -1.31
NEDD9-204ENST00000448183 P01737 135 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 143.4 ms