RNA–Protein interactions for RNA: ENST00000446916.2

ATRN-202, Transcript of attractin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ATRN, Length 3,921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRN-202ENST00000446916 HIST1H2BNQ99877 126 aa12.72□□□□□ -0.37
ATRN-202ENST00000446916 HIST1H2BMQ99879 126 aa12.72□□□□□ -0.37
ATRN-202ENST00000446916 RTN4RQ9BZR6 473 aa12.72□□□□□ -0.37
ATRN-202ENST00000446916 CHST5Q9GZS9 411 aa12.72□□□□□ -0.37
ATRN-202ENST00000446916 ICAM5Q9UMF0 924 aa12.72□□□□□ -0.37
ATRN-202ENST00000446916 LRP12Q9Y561 859 aa12.72□□□□□ -0.37
ATRN-202ENST00000446916 B4E171 279 aa12.72□□□□□ -0.37
ATRN-202ENST00000446916 LDLRAD4O15165 306 aa12.72□□□□□ -0.37
ATRN-202ENST00000446916 RER1O15258 196 aa12.72□□□□□ -0.37
ATRN-202ENST00000446916 TSPAN7P41732 249 aa12.72□□□□□ -0.37
ATRN-202ENST00000446916 CEACAM16Q2WEN9 425 aa12.72□□□□□ -0.37
ATRN-202ENST00000446916 ZNF766Q5HY98 468 aa12.72□□□□□ -0.37
ATRN-202ENST00000446916 C6orf201Q7Z4U5 140 aa12.72□□□□□ -0.37
ATRN-202ENST00000446916 CYB561D1Q8N8Q1 229 aa12.72□□□□□ -0.37
ATRN-202ENST00000446916 OR10D3Q8NH80 312 aa12.72□□□□□ -0.37
ATRN-202ENST00000446916 KCNG3Q8TAE7 436 aa12.72□□□□□ -0.37
ATRN-202ENST00000446916 C4orf45Q96LM5 186 aa12.72□□□□□ -0.37
ATRN-202ENST00000446916 OXGR1Q96P68 337 aa12.72□□□□□ -0.37
ATRN-202ENST00000446916 PPIAL4AQ9Y536 164 aa12.72□□□□□ -0.37
ATRN-202ENST00000446916 DBX1A6NMT0 343 aa12.71□□□□□ -0.37
ATRN-202ENST00000446916 GALR2O43603 387 aaPredicted RBP12.71□□□□□ -0.37
ATRN-202ENST00000446916 RUNX1Q01196 453 aa12.71□□□□□ -0.37
ATRN-202ENST00000446916 SLC35D3Q5M8T2 416 aa12.71□□□□□ -0.37
ATRN-202ENST00000446916 SPANXN5Q5MJ07 72 aa12.71□□□□□ -0.37
ATRN-202ENST00000446916 CPT1CQ8TCG5 803 aa12.71□□□□□ -0.37
ATRN-202ENST00000446916 Q8WTZ3 238 aa12.71□□□□□ -0.37
ATRN-202ENST00000446916 LOXL4Q96JB6 756 aa12.71□□□□□ -0.37
ATRN-202ENST00000446916 ABHD14AQ9BUJ0 271 aa12.71□□□□□ -0.37
ATRN-202ENST00000446916 WDR54Q9H977 334 aa12.71□□□□□ -0.37
ATRN-202ENST00000446916 SPRY1O43609 319 aaPredicted RBP12.71□□□□□ -0.37
ATRN-202ENST00000446916 OR5H8P0DN80 308 aa12.71□□□□□ -0.37
ATRN-202ENST00000446916 NKX2-1P43699 371 aaPredicted RBP12.71□□□□□ -0.37
ATRN-202ENST00000446916 MFGE8Q08431 387 aaPredicted RBP12.71□□□□□ -0.37
ATRN-202ENST00000446916 HMGN3Q15651 99 aa12.71□□□□□ -0.37
ATRN-202ENST00000446916 MESTQ5EB52 335 aa12.71□□□□□ -0.37
ATRN-202ENST00000446916 BTNL3Q6UXE8 466 aa12.71□□□□□ -0.37
ATRN-202ENST00000446916 DBX2Q6ZNG2 339 aa12.71□□□□□ -0.37
ATRN-202ENST00000446916 CYYR1Q96J86 154 aa12.71□□□□□ -0.37
ATRN-202ENST00000446916 HDGFL3Q9Y3E1 203 aa12.71□□□□□ -0.37
ATRN-202ENST00000446916 CD300LBA8K4G0 201 aa12.71□□□□□ -0.38
ATRN-202ENST00000446916 FAHP16930 419 aa12.71□□□□□ -0.38
ATRN-202ENST00000446916 BIVMQ86UB2 503 aa12.71□□□□□ -0.38
ATRN-202ENST00000446916 OR2V1Q8NHB1 315 aa12.71□□□□□ -0.38
ATRN-202ENST00000446916 DYRK2Q92630 601 aa12.71□□□□□ -0.38
ATRN-202ENST00000446916 PLXND1Q9Y4D7 1925 aa12.71□□□□□ -0.38
ATRN-202ENST00000446916 ARHGAP21Q5T5U3 1957 aa12.71□□□□□ -0.38
ATRN-202ENST00000446916 OBSL1O75147 1896 aa12.71□□□□□ -0.38
ATRN-202ENST00000446916 PLPP3O14495 311 aa12.7□□□□□ -0.38
ATRN-202ENST00000446916 ARPC3O15145 178 aa12.7□□□□□ -0.38
ATRN-202ENST00000446916 CLDN1O95832 211 aa12.7□□□□□ -0.38
ATRN-202ENST00000446916 IFNA1P01562 189 aa12.7□□□□□ -0.38
ATRN-202ENST00000446916 ZNF345Q14585 488 aa12.7□□□□□ -0.38
ATRN-202ENST00000446916 ZNF468Q5VIY5 522 aaPredicted RBP12.7□□□□□ -0.38
ATRN-202ENST00000446916 SSX7Q7RTT5 188 aa12.7□□□□□ -0.38
ATRN-202ENST00000446916 OR5AS1Q8N127 324 aa12.7□□□□□ -0.38
ATRN-202ENST00000446916 GPX8Q8TED1 209 aa12.7□□□□□ -0.38
ATRN-202ENST00000446916 ERGIC1Q969X5 290 aa12.7□□□□□ -0.38
ATRN-202ENST00000446916 KLHDC3Q9BQ90 382 aa12.7□□□□□ -0.38
ATRN-202ENST00000446916 FAM173AQ9BQD7 235 aa12.7□□□□□ -0.38
ATRN-202ENST00000446916 IGHV1-45A0A0A0MS14 117 aa12.7□□□□□ -0.38
ATRN-202ENST00000446916 ZBTB25P24278 435 aa12.7□□□□□ -0.38
ATRN-202ENST00000446916 PTTG1IPP53801 180 aa12.7□□□□□ -0.38
ATRN-202ENST00000446916 SUMO3P55854 103 aaPredicted RBP12.7□□□□□ -0.38
ATRN-202ENST00000446916 UCP3P55916 312 aa12.7□□□□□ -0.38
ATRN-202ENST00000446916 MRPL49Q13405 166 aaKnown RBP12.7□□□□□ -0.38
ATRN-202ENST00000446916 VAMP3Q15836 100 aa12.7□□□□□ -0.38
ATRN-202ENST00000446916 EXD3Q8N9H8 876 aa12.7□□□□□ -0.38
ATRN-202ENST00000446916 TMEM229BQ8NBD8 167 aa12.7□□□□□ -0.38
ATRN-202ENST00000446916 SEBOXQ9HB31 216 aaPredicted RBP12.7□□□□□ -0.38
ATRN-202ENST00000446916 CHD8Q9HCK8 2581 aa12.7□□□□□ -0.38
ATRN-202ENST00000446916 PTPRSQ13332 1948 aa12.7□□□□□ -0.38
ATRN-202ENST00000446916 LOC101059948A0A1B0GTJ6 334 aa12.7□□□□□ -0.38
ATRN-202ENST00000446916 CST2P09228 141 aa12.7□□□□□ -0.38
ATRN-202ENST00000446916 PRSS54Q6PEW0 395 aa12.7□□□□□ -0.38
ATRN-202ENST00000446916 OR4F5Q8NH21 305 aa12.7□□□□□ -0.38
ATRN-202ENST00000446916 OR4F4Q96R69 305 aa12.7□□□□□ -0.38
ATRN-202ENST00000446916 HDHD3Q9BSH5 251 aaPredicted RBP12.7□□□□□ -0.38
ATRN-202ENST00000446916 RNF126Q9BV68 326 aa12.7□□□□□ -0.38
ATRN-202ENST00000446916 LRRK1Q38SD2 2015 aa12.7□□□□□ -0.38
ATRN-202ENST00000446916 ZNF320A2RRD8 509 aa12.69□□□□□ -0.38
ATRN-202ENST00000446916 DHHO43323 396 aa12.69□□□□□ -0.38
ATRN-202ENST00000446916 HOXA6P31267 233 aa12.69□□□□□ -0.38
ATRN-202ENST00000446916 SOX8P57073 446 aa12.69□□□□□ -0.38
ATRN-202ENST00000446916 PCOLCEQ15113 449 aa12.69□□□□□ -0.38
ATRN-202ENST00000446916 C17orf82Q86X59 251 aaPredicted RBP12.69□□□□□ -0.38
ATRN-202ENST00000446916 NPEPL1Q8NDH3 523 aa12.69□□□□□ -0.38
ATRN-202ENST00000446916 ABHD3Q8WU67 409 aa12.69□□□□□ -0.38
ATRN-202ENST00000446916 LHX4Q969G2 390 aa12.69□□□□□ -0.38
ATRN-202ENST00000446916 MRPL24Q96A35 216 aaKnown RBP12.69□□□□□ -0.38
ATRN-202ENST00000446916 MRPL37Q9BZE1 423 aaKnown RBP12.69□□□□□ -0.38
ATRN-202ENST00000446916 PRDM13Q9H4Q3 707 aa12.69□□□□□ -0.38
ATRN-202ENST00000446916 ACACBO00763 2458 aa12.69□□□□□ -0.38
ATRN-202ENST00000446916 NOTCH2Q04721 2471 aa12.69□□□□□ -0.38
ATRN-202ENST00000446916 GTF3C1Q12789 2109 aa12.69□□□□□ -0.38
ATRN-202ENST00000446916 TRGV5A0A0B4J1U4 118 aa12.69□□□□□ -0.38
ATRN-202ENST00000446916 C19orf67A6NJJ6 358 aa12.69□□□□□ -0.38
ATRN-202ENST00000446916 VAMP5O95183 116 aa12.69□□□□□ -0.38
ATRN-202ENST00000446916 DUS4LO95620 317 aaKnown RBP12.69□□□□□ -0.38
ATRN-202ENST00000446916 CST4P01036 141 aa12.69□□□□□ -0.38
ATRN-202ENST00000446916 MSR1P21757 451 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms