RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 OR2F2O95006 317 aa14.8□□□□□ -0.04
SMC6-206ENST00000446852 HERV-K104P61576 105 aa14.8□□□□□ -0.04
SMC6-206ENST00000446852 OR2F1Q13607 317 aa14.8□□□□□ -0.04
SMC6-206ENST00000446852 SP6Q3SY56 376 aa14.8□□□□□ -0.04
SMC6-206ENST00000446852 UNQ6126/PRO20091Q6UXV3 157 aa14.8□□□□□ -0.04
SMC6-206ENST00000446852 ACOT7LQ6ZUV0 252 aa14.8□□□□□ -0.04
SMC6-206ENST00000446852 Q8IYB0 196 aa14.8□□□□□ -0.04
SMC6-206ENST00000446852 SLC38A6Q8IZM9 456 aa14.8□□□□□ -0.04
SMC6-206ENST00000446852 Q8NA96 180 aa14.8□□□□□ -0.04
SMC6-206ENST00000446852 RSRP1Q9BUV0 290 aa14.8□□□□□ -0.04
SMC6-206ENST00000446852 TMEM210A6NLX4 147 aa14.8□□□□□ -0.04
SMC6-206ENST00000446852 LEUTXA8MZ59 168 aa14.8□□□□□ -0.04
SMC6-206ENST00000446852 TRDCB7Z8K6 153 aa14.8□□□□□ -0.04
SMC6-206ENST00000446852 DEGS1O15121 323 aa14.8□□□□□ -0.04
SMC6-206ENST00000446852 SPDEFO95238 335 aa14.8□□□□□ -0.04
SMC6-206ENST00000446852 SLC34A2O95436 690 aa14.8□□□□□ -0.04
SMC6-206ENST00000446852 OR5AC1P0C628 307 aa14.8□□□□□ -0.04
SMC6-206ENST00000446852 KITLGP21583 273 aa14.8□□□□□ -0.04
SMC6-206ENST00000446852 CEACAM8P31997 349 aaPredicted RBP14.8□□□□□ -0.04
SMC6-206ENST00000446852 IL15RAQ13261 267 aa14.8□□□□□ -0.04
SMC6-206ENST00000446852 FAM169BQ8N8A8 192 aa14.8□□□□□ -0.04
SMC6-206ENST00000446852 C2orf50Q96LR7 162 aa14.8□□□□□ -0.04
SMC6-206ENST00000446852 TRBV6-7A0A0A0MS04 114 aa14.79□□□□□ -0.04
SMC6-206ENST00000446852 TRBV6-6A0A0A6YYG2 114 aa14.79□□□□□ -0.04
SMC6-206ENST00000446852 TIMM8AO60220 97 aaPredicted RBP14.79□□□□□ -0.04
SMC6-206ENST00000446852 GLAP06280 429 aa14.79□□□□□ -0.04
SMC6-206ENST00000446852 RCC1P18754 421 aaPredicted RBP14.79□□□□□ -0.04
SMC6-206ENST00000446852 TDGF1P3P51864 188 aa14.79□□□□□ -0.04
SMC6-206ENST00000446852 NAAAQ02083 359 aa14.79□□□□□ -0.04
SMC6-206ENST00000446852 NHLH1Q02575 133 aa14.79□□□□□ -0.04
SMC6-206ENST00000446852 ALKBH2Q6NS38 261 aa14.79□□□□□ -0.04
SMC6-206ENST00000446852 SLC51BQ86UW2 128 aa14.79□□□□□ -0.04
SMC6-206ENST00000446852 GALNT14Q96FL9 552 aa14.79□□□□□ -0.04
SMC6-206ENST00000446852 RASL12Q9NYN1 266 aa14.79□□□□□ -0.04
SMC6-206ENST00000446852 AUP1Q9Y679 476 aa14.79□□□□□ -0.04
SMC6-206ENST00000446852 KIR2DS1A0A191URI9 304 aa14.78□□□□□ -0.04
SMC6-206ENST00000446852 SIRPB1O00241 398 aa14.78□□□□□ -0.04
SMC6-206ENST00000446852 NXPH2O95156 264 aa14.78□□□□□ -0.04
SMC6-206ENST00000446852 OR2H2O95918 312 aa14.78□□□□□ -0.04
SMC6-206ENST00000446852 KIR2DS4P43632 304 aa14.78□□□□□ -0.04
SMC6-206ENST00000446852 ZNF83P51522 516 aa14.78□□□□□ -0.04
SMC6-206ENST00000446852 HOXA4Q00056 320 aaPredicted RBP14.78□□□□□ -0.04
SMC6-206ENST00000446852 TMEM187Q14656 261 aa14.78□□□□□ -0.04
SMC6-206ENST00000446852 KIR2DS1Q14954 304 aa14.78□□□□□ -0.04
SMC6-206ENST00000446852 TBR1Q16650 682 aa14.78□□□□□ -0.04
SMC6-206ENST00000446852 ZNF826PQ6ZT77 177 aa14.78□□□□□ -0.04
SMC6-206ENST00000446852 C11orf53Q8IXP5 236 aa14.78□□□□□ -0.04
SMC6-206ENST00000446852 MRPL24Q96A35 216 aaKnown RBP14.78□□□□□ -0.04
SMC6-206ENST00000446852 SFXN3Q9BWM7 321 aa14.78□□□□□ -0.04
SMC6-206ENST00000446852 RIMS4Q9H426 269 aaPredicted RBP14.78□□□□□ -0.04
SMC6-206ENST00000446852 MSL2Q9HCI7 577 aa14.78□□□□□ -0.04
SMC6-206ENST00000446852 TLN1Q9Y490 2541 aaKnown RBP14.78□□□□□ -0.04
SMC6-206ENST00000446852 SLC33A1O00400 549 aaPredicted RBP14.78□□□□□ -0.04
SMC6-206ENST00000446852 TK1P04183 234 aa14.78□□□□□ -0.04
SMC6-206ENST00000446852 GLI4P10075 376 aa14.78□□□□□ -0.04
SMC6-206ENST00000446852 TUBG1P23258 451 aa14.78□□□□□ -0.04
SMC6-206ENST00000446852 ZNF718Q3SXZ3 478 aa14.78□□□□□ -0.04
SMC6-206ENST00000446852 TIMM23BQ5SRD1 257 aa14.78□□□□□ -0.04
SMC6-206ENST00000446852 MBNL2Q5VZF2 373 aaKnown RBP14.78□□□□□ -0.04
SMC6-206ENST00000446852 ZNF880Q6PDB4 577 aa14.78□□□□□ -0.04
SMC6-206ENST00000446852 DCUN1D4Q92564 292 aa14.78□□□□□ -0.04
SMC6-206ENST00000446852 RRNAD1Q96FB5 475 aaKnown RBP14.78□□□□□ -0.04
SMC6-206ENST00000446852 TUBG2Q9NRH3 451 aa14.78□□□□□ -0.04
SMC6-206ENST00000446852 OR5AC2Q9NZP5 309 aa14.78□□□□□ -0.04
SMC6-206ENST00000446852 BCL2L11O43521 198 aa14.77□□□□□ -0.04
SMC6-206ENST00000446852 RLN2P04090 185 aa14.77□□□□□ -0.04
SMC6-206ENST00000446852 RAB32Q13637 225 aa14.77□□□□□ -0.04
SMC6-206ENST00000446852 ZNF146Q15072 292 aa14.77□□□□□ -0.04
SMC6-206ENST00000446852 MSMPQ1L6U9 139 aa14.77□□□□□ -0.04
SMC6-206ENST00000446852 PAN3Q58A45 887 aaKnown RBP14.77□□□□□ -0.04
SMC6-206ENST00000446852 CISD2Q8N5K1 135 aaKnown RBP14.77□□□□□ -0.04
SMC6-206ENST00000446852 PLPPR1Q8TBJ4 325 aa14.77□□□□□ -0.04
SMC6-206ENST00000446852 GSKIPQ9P0R6 139 aa14.77□□□□□ -0.04
SMC6-206ENST00000446852 KCNIP3Q9Y2W7 256 aa14.77□□□□□ -0.04
SMC6-206ENST00000446852 IGKV1D-13A0A0B4J2D9 117 aa14.77□□□□□ -0.05
SMC6-206ENST00000446852 K7ENP7 123 aa14.77□□□□□ -0.05
SMC6-206ENST00000446852 TUSC2O75896 110 aa14.77□□□□□ -0.05
SMC6-206ENST00000446852 IGKV1-13P0DP09 117 aa14.77□□□□□ -0.05
SMC6-206ENST00000446852 GNRHRP30968 328 aa14.77□□□□□ -0.05
SMC6-206ENST00000446852 KCNJ3P48549 501 aa14.77□□□□□ -0.05
SMC6-206ENST00000446852 RAB14P61106 215 aa14.77□□□□□ -0.05
SMC6-206ENST00000446852 PCSK4Q6UW60 755 aa14.77□□□□□ -0.05
SMC6-206ENST00000446852 INO80EQ8NBZ0 244 aaPredicted RBP14.77□□□□□ -0.05
SMC6-206ENST00000446852 SCARB1Q8WTV0 552 aa14.77□□□□□ -0.05
SMC6-206ENST00000446852 HES4Q9HCC6 221 aa14.77□□□□□ -0.05
SMC6-206ENST00000446852 SPTBN4Q9H254 2564 aa14.77□□□□□ -0.05
SMC6-206ENST00000446852 IGF2RP11717 2491 aa14.77□□□□□ -0.05
SMC6-206ENST00000446852 NBEAQ8NFP9 2946 aa14.77□□□□□ -0.05
SMC6-206ENST00000446852 KIAA2026Q5HYC2 2103 aa14.77□□□□□ -0.05
SMC6-206ENST00000446852 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.76□□□□□ -0.05
SMC6-206ENST00000446852 KANTRA0A1W2PQU2 76 aa14.76□□□□□ -0.05
SMC6-206ENST00000446852 GCH1P30793 250 aa14.76□□□□□ -0.05
SMC6-206ENST00000446852 IAH1Q2TAA2 248 aaPredicted RBP14.76□□□□□ -0.05
SMC6-206ENST00000446852 PRAMEF6Q5VXH4 476 aa14.76□□□□□ -0.05
SMC6-206ENST00000446852 GGNBP1Q5YKI7 109 aa14.76□□□□□ -0.05
SMC6-206ENST00000446852 GLYATL2Q8WU03 294 aa14.76□□□□□ -0.05
SMC6-206ENST00000446852 ST8SIA2Q92186 375 aa14.76□□□□□ -0.05
SMC6-206ENST00000446852 SLX1AQ9BQ83 275 aa14.76□□□□□ -0.05
SMC6-206ENST00000446852 CXXC4Q9H2H0 198 aa14.76□□□□□ -0.05
SMC6-206ENST00000446852 M0R1B8 84 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms