RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 GFI1Q99684 422 aa9.25□□□□□ -0.93
TOP3B-210ENST00000444502 OCSTAMPQ9BR26 566 aa9.25□□□□□ -0.93
TOP3B-210ENST00000444502 ELOVL1Q9BW60 279 aa9.25□□□□□ -0.93
TOP3B-210ENST00000444502 TMPRSS13Q9BYE2 586 aa9.25□□□□□ -0.93
TOP3B-210ENST00000444502 WDR1O75083 606 aa9.24□□□□□ -0.93
TOP3B-210ENST00000444502 OR8U8P0C7N1 319 aa9.24□□□□□ -0.93
TOP3B-210ENST00000444502 MRPL14Q6P1L8 145 aaKnown RBP9.24□□□□□ -0.93
TOP3B-210ENST00000444502 OR10AD1Q8NGE0 317 aa9.24□□□□□ -0.93
TOP3B-210ENST00000444502 RND1Q92730 232 aa9.24□□□□□ -0.93
TOP3B-210ENST00000444502 FAM212BQ9NTI7 297 aaPredicted RBP9.24□□□□□ -0.93
TOP3B-210ENST00000444502 KPTNQ9Y664 436 aa9.24□□□□□ -0.93
TOP3B-210ENST00000444502 C3orf80F5H4A9 247 aa9.24□□□□□ -0.93
TOP3B-210ENST00000444502 CYB5BO43169 146 aa9.24□□□□□ -0.93
TOP3B-210ENST00000444502 LRP3O75074 770 aa9.24□□□□□ -0.93
TOP3B-210ENST00000444502 ZNF728P0DKX0 622 aa9.24□□□□□ -0.93
TOP3B-210ENST00000444502 HIST1H1DP16402 221 aaKnown RBP9.24□□□□□ -0.93
TOP3B-210ENST00000444502 ADCYAP1P18509 176 aa9.24□□□□□ -0.93
TOP3B-210ENST00000444502 ALDH3B1P43353 468 aa9.24□□□□□ -0.93
TOP3B-210ENST00000444502 SCAND1P57086 179 aa9.24□□□□□ -0.93
TOP3B-210ENST00000444502 ZFP36L1Q07352 338 aaKnown RBP9.24□□□□□ -0.93
TOP3B-210ENST00000444502 ZP4Q12836 540 aa9.24□□□□□ -0.93
TOP3B-210ENST00000444502 C11orf87Q6NUJ2 197 aa9.24□□□□□ -0.93
TOP3B-210ENST00000444502 Q6ZRG5 221 aa9.24□□□□□ -0.93
TOP3B-210ENST00000444502 SUMF1Q8NBK3 374 aa9.24□□□□□ -0.93
TOP3B-210ENST00000444502 RIMS4Q9H426 269 aaPredicted RBP9.24□□□□□ -0.93
TOP3B-210ENST00000444502 POLDIP2Q9Y2S7 368 aa9.24□□□□□ -0.93
TOP3B-210ENST00000444502 GSTP1P09211 210 aaKnown RBP9.24□□□□□ -0.93
TOP3B-210ENST00000444502 HIST2H3PS2Q5TEC6 136 aa9.24□□□□□ -0.93
TOP3B-210ENST00000444502 NSUN5P2Q63ZY6 315 aa9.24□□□□□ -0.93
TOP3B-210ENST00000444502 C17orf82Q86X59 251 aaPredicted RBP9.24□□□□□ -0.93
TOP3B-210ENST00000444502 ZNF573Q86YE8 665 aa9.24□□□□□ -0.93
TOP3B-210ENST00000444502 THNSL2Q86YJ6 484 aa9.24□□□□□ -0.93
TOP3B-210ENST00000444502 ARRDC1Q8N5I2 433 aa9.24□□□□□ -0.93
TOP3B-210ENST00000444502 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.24□□□□□ -0.93
TOP3B-210ENST00000444502 TMEM100Q9NV29 134 aa9.24□□□□□ -0.93
TOP3B-210ENST00000444502 AMDHD2Q9Y303 409 aa9.24□□□□□ -0.93
TOP3B-210ENST00000444502 LHFPL6Q9Y693 200 aa9.24□□□□□ -0.93
TOP3B-210ENST00000444502 LOC102724200A0A096LPH7 203 aaPredicted RBP9.23□□□□□ -0.93
TOP3B-210ENST00000444502 BORCS7-ASMTA0A0B4J1R7 106 aa9.23□□□□□ -0.93
TOP3B-210ENST00000444502 C19orf67A6NJJ6 358 aa9.23□□□□□ -0.93
TOP3B-210ENST00000444502 TRAF3IP2O43734 574 aaPredicted RBP9.23□□□□□ -0.93
TOP3B-210ENST00000444502 OMGP23515 440 aa9.23□□□□□ -0.93
TOP3B-210ENST00000444502 PSMB6P28072 239 aa9.23□□□□□ -0.93
TOP3B-210ENST00000444502 SRSF6Q13247 344 aaKnown RBP9.23□□□□□ -0.93
TOP3B-210ENST00000444502 SP6Q3SY56 376 aa9.23□□□□□ -0.93
TOP3B-210ENST00000444502 ZNF808Q8N4W9 903 aaPredicted RBP9.23□□□□□ -0.93
TOP3B-210ENST00000444502 CCL17Q92583 94 aa9.23□□□□□ -0.93
TOP3B-210ENST00000444502 FAAP24Q9BTP7 215 aa9.23□□□□□ -0.93
TOP3B-210ENST00000444502 GPR35Q9HC97 309 aa9.23□□□□□ -0.93
TOP3B-210ENST00000444502 NPDC1Q9NQX5 325 aaPredicted RBP9.23□□□□□ -0.93
TOP3B-210ENST00000444502 MMP26Q9NRE1 261 aa9.23□□□□□ -0.93
TOP3B-210ENST00000444502 DHRS3O75911 302 aa9.23□□□□□ -0.93
TOP3B-210ENST00000444502 OR5H8P0DN80 308 aa9.23□□□□□ -0.93
TOP3B-210ENST00000444502 TMEM11P17152 192 aa9.23□□□□□ -0.93
TOP3B-210ENST00000444502 NHLH2Q02577 135 aa9.23□□□□□ -0.93
TOP3B-210ENST00000444502 GGNBP1Q5YKI7 109 aa9.23□□□□□ -0.93
TOP3B-210ENST00000444502 SUMF2Q8NBJ7 301 aa9.23□□□□□ -0.93
TOP3B-210ENST00000444502 G6PC2Q9NQR9 355 aa9.23□□□□□ -0.93
TOP3B-210ENST00000444502 DOK5Q9P104 306 aa9.23□□□□□ -0.93
TOP3B-210ENST00000444502 KLK13Q9UKR3 277 aa9.23□□□□□ -0.93
TOP3B-210ENST00000444502 COLCA2A8K830 154 aa9.23□□□□□ -0.93
TOP3B-210ENST00000444502 ADAP1O75689 374 aa9.23□□□□□ -0.93
TOP3B-210ENST00000444502 KLF7O75840 302 aaPredicted RBP9.23□□□□□ -0.93
TOP3B-210ENST00000444502 IGHV3-13P01766 116 aa9.23□□□□□ -0.93
TOP3B-210ENST00000444502 IGHV3-7P01780 117 aa9.23□□□□□ -0.93
TOP3B-210ENST00000444502 MPGP29372 298 aa9.23□□□□□ -0.93
TOP3B-210ENST00000444502 TAGLN2P37802 199 aaKnown RBP9.23□□□□□ -0.93
TOP3B-210ENST00000444502 ID4P47928 161 aa9.23□□□□□ -0.93
TOP3B-210ENST00000444502 UBE2KP61086 200 aa9.23□□□□□ -0.93
TOP3B-210ENST00000444502 ERVK-16P61578 105 aa9.23□□□□□ -0.93
TOP3B-210ENST00000444502 SSBP1Q04837 148 aaKnown RBP9.23□□□□□ -0.93
TOP3B-210ENST00000444502 SOHLH1Q5JUK2 328 aa9.23□□□□□ -0.93
TOP3B-210ENST00000444502 RFESDQ8TAC1 157 aa9.23□□□□□ -0.93
TOP3B-210ENST00000444502 WBP1Q96G27 269 aa9.23□□□□□ -0.93
TOP3B-210ENST00000444502 CHD8Q9HCK8 2581 aa9.23□□□□□ -0.93
TOP3B-210ENST00000444502 A0A1B0GWJ7 208 aa9.23□□□□□ -0.93
TOP3B-210ENST00000444502 PHF1O43189 567 aaPredicted RBP9.23□□□□□ -0.93
TOP3B-210ENST00000444502 PGA4P0DJD7 388 aa9.23□□□□□ -0.93
TOP3B-210ENST00000444502 PGA3P0DJD8 388 aa9.23□□□□□ -0.93
TOP3B-210ENST00000444502 UNQ6494/PRO21346Q6UXR6 183 aa9.23□□□□□ -0.93
TOP3B-210ENST00000444502 ZNF709Q8N972 641 aa9.23□□□□□ -0.93
TOP3B-210ENST00000444502 NFAM1Q8NET5 270 aaPredicted RBP9.23□□□□□ -0.93
TOP3B-210ENST00000444502 WDR13Q9H1Z4 485 aa9.23□□□□□ -0.93
TOP3B-210ENST00000444502 MSL2Q9HCI7 577 aa9.23□□□□□ -0.93
TOP3B-210ENST00000444502 ZNF106Q9H2Y7 1883 aaKnown RBP9.22□□□□□ -0.93
TOP3B-210ENST00000444502 CDX4O14627 284 aaPredicted RBP9.22□□□□□ -0.93
TOP3B-210ENST00000444502 FGF7P21781 194 aa9.22□□□□□ -0.93
TOP3B-210ENST00000444502 THBS4P35443 961 aa9.22□□□□□ -0.93
TOP3B-210ENST00000444502 SPNS3Q6ZMD2 512 aa9.22□□□□□ -0.93
TOP3B-210ENST00000444502 MITD1Q8WV92 249 aa9.22□□□□□ -0.93
TOP3B-210ENST00000444502 PP6455Q8WZ26 134 aa9.22□□□□□ -0.93
TOP3B-210ENST00000444502 FAM122AQ96E09 287 aa9.22□□□□□ -0.93
TOP3B-210ENST00000444502 PACRGQ96M98 296 aaPredicted RBP9.22□□□□□ -0.93
TOP3B-210ENST00000444502 SF3B5Q9BWJ5 86 aaKnown RBP9.22□□□□□ -0.93
TOP3B-210ENST00000444502 CBLN4Q9NTU7 201 aa9.22□□□□□ -0.93
TOP3B-210ENST00000444502 C1orf123Q9NWV4 160 aa9.22□□□□□ -0.93
TOP3B-210ENST00000444502 PRSS50Q9UI38 385 aa9.22□□□□□ -0.93
TOP3B-210ENST00000444502 CHCHD2Q9Y6H1 151 aaPredicted RBP9.22□□□□□ -0.93
TOP3B-210ENST00000444502 CSPG4Q6UVK1 2322 aa9.22□□□□□ -0.93
TOP3B-210ENST00000444502 NUP210Q8TEM1 1887 aaPredicted RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms