RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 MMP23AO75900 390 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 STK17BO94768 372 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 SYNGR4O95473 234 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 SLC16A8O95907 504 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 CD59P13987 128 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 PMCHP20382 165 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 ANOS1P23352 680 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 ACVRL1P37023 503 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 PSMB10P40306 273 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 OPRD1P41143 372 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 CDKN2AP42771 156 aaKnown RBP2.44□□□□□ -2.02
LIG4-203ENST00000442234 GFRA1P56159 465 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 TAS2R31P59538 309 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 ZNF154Q13106 437 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 HSPB2Q16082 182 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 BSXQ3C1V8 233 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 ALKBH6Q3KRA9 238 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 COX19Q49B96 90 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 SPIN3Q5JUX0 258 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 RNFT1Q5M7Z0 435 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 LRRC70Q7Z2Q7 622 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 TSEN54Q7Z6J9 526 aaKnown RBP2.44□□□□□ -2.02
LIG4-203ENST00000442234 SGPP2Q8IWX5 399 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 MUC15Q8N387 334 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 D2HGDHQ8N465 521 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 COX18Q8N8Q8 333 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 ACOT4Q8N9L9 421 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 ZNF439Q8NDP4 499 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 SLC2A12Q8TD20 617 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 RAB8BQ92930 207 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 MRAP2Q96G30 205 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 FCRL2Q96LA5 508 aaPredicted RBP2.44□□□□□ -2.02
LIG4-203ENST00000442234 TRIB3Q96RU7 358 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 CD180Q99467 661 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 PSMG3Q9BT73 122 aaPredicted RBP2.44□□□□□ -2.02
LIG4-203ENST00000442234 ABHD14AQ9BUJ0 271 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 ABHD6Q9BV23 337 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 ATG10Q9H0Y0 220 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 OR51I2Q9H344 312 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 ELL3Q9HB65 397 aaPredicted RBP2.44□□□□□ -2.02
LIG4-203ENST00000442234 SLC2A4RGQ9NR83 387 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 AURKAIP1Q9NWT8 199 aaPredicted RBP2.44□□□□□ -2.02
LIG4-203ENST00000442234 P4HTMQ9NXG6 502 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 IL17CQ9P0M4 197 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 GNG13Q9P2W3 67 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 CDC42EP3Q9UKI2 254 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 SLC45A2Q9UMX9 530 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 ZBTB32Q9Y2Y4 487 aaPredicted RBP2.44□□□□□ -2.02
LIG4-203ENST00000442234 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.44□□□□□ -2.02
LIG4-203ENST00000442234 TRAV1-2A0A0B4J238 106 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 ZNF816-ZNF321PA0A0X1KG74 233 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 LRP5LA4QPB2 252 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 CDHR4A6H8M9 788 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 ZNF840PA6NDX5 716 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 ARRDC5A6NEK1 342 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 OR2T8A6NH00 312 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 FAM90A27PA6NNH2 459 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 RIIAD1A6NNX1 92 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 ANKRD66B4E2M5 251 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 IFNL4K9M1U5 179 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 SLC17A3O00476 420 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 TNFSF14O43557 240 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 UTS2O95399 124 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 PAPLNO95428 1278 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 HBE1P02100 147 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 CRYGCP07315 174 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 LINC00271P0C7V0 271 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 CCL2P13500 99 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 SRMP19623 302 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 CR2P20023 1033 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 HTR1FP30939 366 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 SLC6A6P31641 620 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 P2RY2P41231 377 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 LGALS7P47929 136 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 AMTP48728 403 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 PDLIM4P50479 330 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 OR1D5P58170 312 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 RPS20P60866 119 aaKnown RBP2.44□□□□□ -2.02
LIG4-203ENST00000442234 RHOAP61586 193 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 SRSF2Q01130 221 aaKnown RBP2.44□□□□□ -2.02
LIG4-203ENST00000442234 TGFBR3Q03167 851 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 ELAVL3Q14576 367 aaKnown RBP2.44□□□□□ -2.02
LIG4-203ENST00000442234 CST6Q15828 149 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 SRSF7Q16629 238 aaKnown RBP eCLIP2.44□□□□□ -2.02
LIG4-203ENST00000442234 IAH1Q2TAA2 248 aaPredicted RBP2.44□□□□□ -2.02
LIG4-203ENST00000442234 SLC25A52Q3SY17 297 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 PHYHD1Q5SRE7 291 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 PLCXD3Q63HM9 321 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 TMEM225Q6GV28 225 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 CCDC144NLQ6NUI1 221 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 UNQ9370/PRO34162Q6UXP9 181 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 ALKAL1Q6UXT8 129 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 MDGA2Q7Z553 956 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 HMGN2P46Q86SG4 172 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 SAXO1Q8IYX7 474 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 TMEM99Q8N816 258 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 ZFP62Q8NB50 900 aaPredicted RBP2.44□□□□□ -2.02
LIG4-203ENST00000442234 APCDD1LQ8NCL9 501 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 OR2G3Q8NGZ4 309 aa2.44□□□□□ -2.02
LIG4-203ENST00000442234 RERGQ96A58 199 aaPredicted RBP2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms