RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 TMEM30BQ3MIR4 351 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 TMEM78Q5T7P6 136 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 TMEM215Q68D42 235 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 C12orf45Q8N5I9 185 aaPredicted RBP3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 PRELID2Q8N945 189 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 OR6K6Q8NGW6 343 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 FGF11Q92914 225 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 APOBEC3DQ96AK3 386 aaPredicted RBP3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 CLDN23Q96B33 292 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 GALMQ96C23 342 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 RPUSD4Q96CM3 377 aaKnown RBP3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 PIK3IP1Q96FE7 263 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 IMP4Q96G21 291 aaKnown RBP3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 CAPZA3Q96KX2 299 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 MS4A4EQ96PG1 132 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 RBP7Q96R05 134 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 MRPL45Q9BRJ2 306 aaKnown RBP3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 GINS3Q9BRX5 216 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 TAPBPLQ9BX59 468 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 MS4A6AQ9H2W1 248 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 FAM96AQ9H5X1 160 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 CWH43Q9H720 699 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 MCUBQ9NWR8 336 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 OPTCQ9UBM4 332 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 LGALS13Q9UHV8 139 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 PYCARDQ9ULZ3 195 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 TP53TG1Q9Y2A0 90 aa3.19□□□□□ -1.9
CDC42BPA-207ENST00000441725 FMN1Q68DA7 1419 aa3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 A0A1W2PRE2 83 aa3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 EPM2AB3EWF7 344 aa3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 H3BSA7 217 aa3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 MBTPS2O43462 519 aa3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 ORC5O43913 435 aa3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 CDC40O60508 579 aaKnown RBP eCLIP3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 CLDN11O75508 207 aa3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 TNFSF15O95150 251 aa3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 C6orf47O95873 294 aa3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 IFNA17P01571 189 aa3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 TACSTD2P09758 323 aa3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 TSPAN19P0C672 248 aa3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 HIST1H1BP16401 226 aaKnown RBP3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 HIST1H1TP22492 207 aaPredicted RBP3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 IL12AP29459 219 aa3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 PYCR1P32322 319 aa3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 REG1BP48304 166 aa3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 DLX6P56179 175 aa3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 RHOBP62745 196 aa3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 EDDM3AQ14507 147 aa3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 TAF9Q16594 264 aa3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 HLA-DRB5Q30154 266 aa3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 NSUN5P1Q3KNT7 163 aa3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 ZNF613Q6PF04 617 aa3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 PAMR1Q6UXH9 720 aa3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 FAM19A5Q7Z5A7 132 aaPredicted RBP3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 ZADH2Q8N4Q0 377 aa3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 OR4C6Q8NH72 309 aa3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 EEF1AKMT1Q8WVE0 214 aa3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 PTX4Q96A99 478 aa3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 FBXO6Q9NRD1 293 aaPredicted RBP3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 CALML5Q9NZT1 146 aa3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 DHRS4-AS1Q9P1J3 65 aa3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 Q9UF83 564 aa3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 ZNF230Q9UIE0 474 aaPredicted RBP3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 MUTYHQ9UIF7 546 aa3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 SAR1BQ9Y6B6 198 aa3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 WSB1Q9Y6I7 421 aa3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 NOS1P29475 1434 aa3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 IGKV1D-8A0A087WSZ0 117 aa3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 TRAV9-2A0A087WT02 112 aa3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 TSPAN11A1L157 253 aa3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 M0R143 59 aa3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 FAAHO00519 579 aa3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 CDX4O14627 284 aaPredicted RBP3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 ZNF207O43670 478 aaKnown RBP3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 TPST1O60507 370 aa3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 RENP00797 406 aa3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 RIPPLY3P57055 190 aa3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 TCTAP57738 103 aa3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 FAM53BQ14153 422 aa3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 CCSMST1Q4G0I0 132 aa3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 CMC1Q7Z7K0 106 aa3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 C10orf107Q8IVU9 208 aa3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 BAP18Q8IXM2 172 aa3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 TMEM86BQ8N661 226 aa3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 OR52E4Q8NGH9 312 aa3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 OR4D11Q8NGI4 311 aa3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 OR4X1Q8NH49 305 aa3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 SKA2Q8WVK7 121 aaPredicted RBP3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 TFB1MQ8WVM0 346 aaKnown RBP3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 ITLN1Q8WWA0 313 aa3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 SEC22AQ96IW7 307 aa3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 APOL4Q9BPW4 351 aa3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 RNF126Q9BV68 326 aa3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 SUCNR1Q9BXA5 334 aa3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 SNHG12Q9BXW3 62 aa3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 MROQ9BYG7 248 aa3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 ACOT13Q9NPJ3 140 aa3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 SPANXB1Q9NS25 103 aaPredicted RBP3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 SNX12Q9UMY4 172 aa3.18□□□□□ -1.9
CDC42BPA-207ENST00000441725 ZFP30Q9Y2G7 519 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms