RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 ZNF728P0DKX0 622 aa7.82□□□□□ -1.16
HDAC6-209ENST00000440653 RPS2P15880 293 aaKnown RBP7.82□□□□□ -1.16
HDAC6-209ENST00000440653 ZNF14P17017 642 aaPredicted RBP7.82□□□□□ -1.16
HDAC6-209ENST00000440653 HAAOP46952 286 aa7.82□□□□□ -1.16
HDAC6-209ENST00000440653 CCL11P51671 97 aa7.82□□□□□ -1.16
HDAC6-209ENST00000440653 PMP22Q01453 160 aa7.82□□□□□ -1.16
HDAC6-209ENST00000440653 RBM39Q14498 530 aaKnown RBP7.82□□□□□ -1.16
HDAC6-209ENST00000440653 PIGYQ3MUY2 71 aa7.82□□□□□ -1.16
HDAC6-209ENST00000440653 ACSF3Q4G176 576 aaPredicted RBP7.82□□□□□ -1.16
HDAC6-209ENST00000440653 ABCA11PQ4W5N1 156 aa7.82□□□□□ -1.16
HDAC6-209ENST00000440653 HIKESHIQ53FT3 197 aa7.82□□□□□ -1.16
HDAC6-209ENST00000440653 C6orf183Q5T699 404 aa7.82□□□□□ -1.16
HDAC6-209ENST00000440653 ZNF660Q6AZW8 331 aaPredicted RBP7.82□□□□□ -1.16
HDAC6-209ENST00000440653 SLC22A25Q6T423 547 aa7.82□□□□□ -1.16
HDAC6-209ENST00000440653 FIP1L1Q6UN15 594 aaKnown RBP7.82□□□□□ -1.16
HDAC6-209ENST00000440653 RTN4RL2Q86UN3 420 aa7.82□□□□□ -1.16
HDAC6-209ENST00000440653 CALHM1Q8IU99 346 aa7.82□□□□□ -1.16
HDAC6-209ENST00000440653 CISD2Q8N5K1 135 aaKnown RBP7.82□□□□□ -1.16
HDAC6-209ENST00000440653 ANGPTL6Q8NI99 470 aa7.82□□□□□ -1.16
HDAC6-209ENST00000440653 OR5P3Q8WZ94 311 aa7.82□□□□□ -1.16
HDAC6-209ENST00000440653 MOB3AQ96BX8 217 aa7.82□□□□□ -1.16
HDAC6-209ENST00000440653 WDR89Q96FK6 387 aaPredicted RBP7.82□□□□□ -1.16
HDAC6-209ENST00000440653 GALNT14Q96FL9 552 aa7.82□□□□□ -1.16
HDAC6-209ENST00000440653 ZNF2Q9BSG1 426 aaPredicted RBP7.82□□□□□ -1.16
HDAC6-209ENST00000440653 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.81□□□□□ -1.16
HDAC6-209ENST00000440653 FAM25EA8MYX2 175 aa7.81□□□□□ -1.16
HDAC6-209ENST00000440653 ZNF732B4DXR9 585 aa7.81□□□□□ -1.16
HDAC6-209ENST00000440653 CCSO14618 274 aa7.81□□□□□ -1.16
HDAC6-209ENST00000440653 DEGS1O15121 323 aa7.81□□□□□ -1.16
HDAC6-209ENST00000440653 DIRAS3O95661 229 aa7.81□□□□□ -1.16
HDAC6-209ENST00000440653 IFNA21P01568 189 aa7.81□□□□□ -1.16
HDAC6-209ENST00000440653 RRASP10301 218 aa7.81□□□□□ -1.16
HDAC6-209ENST00000440653 LYL1P12980 280 aa7.81□□□□□ -1.16
HDAC6-209ENST00000440653 COX6B1P14854 86 aa7.81□□□□□ -1.16
HDAC6-209ENST00000440653 RAC2P15153 192 aa7.81□□□□□ -1.16
HDAC6-209ENST00000440653 BCL3P20749 454 aa7.81□□□□□ -1.16
HDAC6-209ENST00000440653 PSMB6P28072 239 aa7.81□□□□□ -1.16
HDAC6-209ENST00000440653 SERPINF1P36955 418 aa7.81□□□□□ -1.16
HDAC6-209ENST00000440653 WNT5AP41221 380 aa7.81□□□□□ -1.16
HDAC6-209ENST00000440653 GPM6AP51674 278 aa7.81□□□□□ -1.16
HDAC6-209ENST00000440653 FOXG1P55316 489 aaPredicted RBP7.81□□□□□ -1.16
HDAC6-209ENST00000440653 EIF5AP63241 154 aaKnown RBP7.81□□□□□ -1.16
HDAC6-209ENST00000440653 SUPT4H1P63272 117 aaKnown RBP7.81□□□□□ -1.16
HDAC6-209ENST00000440653 SMCO1Q147U7 214 aa7.81□□□□□ -1.16
HDAC6-209ENST00000440653 SHEQ5VZ18 495 aa7.81□□□□□ -1.16
HDAC6-209ENST00000440653 PRSS54Q6PEW0 395 aa7.81□□□□□ -1.16
HDAC6-209ENST00000440653 DHRS11Q6UWP2 260 aa7.81□□□□□ -1.16
HDAC6-209ENST00000440653 KCTD9Q7L273 389 aa7.81□□□□□ -1.16
HDAC6-209ENST00000440653 RBMXL3Q8N7X1 1067 aaKnown RBP7.81□□□□□ -1.16
HDAC6-209ENST00000440653 FAM169BQ8N8A8 192 aa7.81□□□□□ -1.16
HDAC6-209ENST00000440653 STOML3Q8TAV4 291 aa7.81□□□□□ -1.16
HDAC6-209ENST00000440653 LRRC20Q8TCA0 184 aa7.81□□□□□ -1.16
HDAC6-209ENST00000440653 ZNF75AQ96N20 296 aa7.81□□□□□ -1.16
HDAC6-209ENST00000440653 TRIB1Q96RU8 372 aa7.81□□□□□ -1.16
HDAC6-209ENST00000440653 ARPC5LQ9BPX5 153 aa7.81□□□□□ -1.16
HDAC6-209ENST00000440653 SYT3Q9BQG1 590 aa7.81□□□□□ -1.16
HDAC6-209ENST00000440653 RTBDNQ9BSG5 229 aaPredicted RBP7.81□□□□□ -1.16
HDAC6-209ENST00000440653 SLC25A32Q9H2D1 315 aa7.81□□□□□ -1.16
HDAC6-209ENST00000440653 NAA60Q9H7X0 242 aa7.81□□□□□ -1.16
HDAC6-209ENST00000440653 MBD2Q9UBB5 411 aa7.81□□□□□ -1.16
HDAC6-209ENST00000440653 DNAJB11Q9UBS4 358 aa7.81□□□□□ -1.16
HDAC6-209ENST00000440653 ZNF230Q9UIE0 474 aaPredicted RBP7.81□□□□□ -1.16
HDAC6-209ENST00000440653 FBXO9Q9UK97 447 aaPredicted RBP7.81□□□□□ -1.16
HDAC6-209ENST00000440653 KCNIP3Q9Y2W7 256 aa7.81□□□□□ -1.16
HDAC6-209ENST00000440653 AMDHD2Q9Y303 409 aa7.81□□□□□ -1.16
HDAC6-209ENST00000440653 VPS13CQ709C8 3753 aa7.81□□□□□ -1.16
HDAC6-209ENST00000440653 TEX13DA0A0J9YY54 714 aaPredicted RBP7.8□□□□□ -1.16
HDAC6-209ENST00000440653 DUXBA0A1W2PPF3 345 aa7.8□□□□□ -1.16
HDAC6-209ENST00000440653 RNF222A6NCQ9 220 aa7.8□□□□□ -1.16
HDAC6-209ENST00000440653 MBD3L4A6NDZ8 208 aaPredicted RBP7.8□□□□□ -1.16
HDAC6-209ENST00000440653 MBD3L3A6NE82 208 aaPredicted RBP7.8□□□□□ -1.16
HDAC6-209ENST00000440653 MBD3L5A6NJ08 208 aaPredicted RBP7.8□□□□□ -1.16
HDAC6-209ENST00000440653 IQCF6A8MYZ5 107 aa7.8□□□□□ -1.16
HDAC6-209ENST00000440653 SDCBPO00560 298 aaPredicted RBP7.8□□□□□ -1.16
HDAC6-209ENST00000440653 WDR1O75083 606 aa7.8□□□□□ -1.16
HDAC6-209ENST00000440653 NAPSAO96009 420 aa7.8□□□□□ -1.16
HDAC6-209ENST00000440653 IGKV3-15P01624 115 aa7.8□□□□□ -1.16
HDAC6-209ENST00000440653 CRYABP02511 175 aaKnown RBP7.8□□□□□ -1.16
HDAC6-209ENST00000440653 CBR1P16152 277 aa7.8□□□□□ -1.16
HDAC6-209ENST00000440653 IGHV1-2P23083 117 aa7.8□□□□□ -1.16
HDAC6-209ENST00000440653 S100GP29377 79 aa7.8□□□□□ -1.16
HDAC6-209ENST00000440653 RND3P61587 244 aa7.8□□□□□ -1.16
HDAC6-209ENST00000440653 PPP1CBP62140 327 aa7.8□□□□□ -1.16
HDAC6-209ENST00000440653 NAAAQ02083 359 aa7.8□□□□□ -1.16
HDAC6-209ENST00000440653 MZT1Q08AG7 82 aa7.8□□□□□ -1.16
HDAC6-209ENST00000440653 BAMBIQ13145 260 aa7.8□□□□□ -1.16
HDAC6-209ENST00000440653 P2RY6Q15077 328 aa7.8□□□□□ -1.16
HDAC6-209ENST00000440653 SLC9A3R2Q15599 337 aa7.8□□□□□ -1.16
HDAC6-209ENST00000440653 DMRTC1Q5HYR2 192 aa7.8□□□□□ -1.16
HDAC6-209ENST00000440653 SPIN3Q5JUX0 258 aa7.8□□□□□ -1.16
HDAC6-209ENST00000440653 COMMD7Q86VX2 200 aa7.8□□□□□ -1.16
HDAC6-209ENST00000440653 TGIF2LYQ8IUE0 185 aa7.8□□□□□ -1.16
HDAC6-209ENST00000440653 LRTM2Q8N967 370 aa7.8□□□□□ -1.16
HDAC6-209ENST00000440653 MBD3L2Q8NHZ7 208 aaPredicted RBP7.8□□□□□ -1.16
HDAC6-209ENST00000440653 MAFIPQ8WZ33 124 aa7.8□□□□□ -1.16
HDAC6-209ENST00000440653 ST8SIA2Q92186 375 aa7.8□□□□□ -1.16
HDAC6-209ENST00000440653 SLAMF9Q96A28 289 aa7.8□□□□□ -1.16
HDAC6-209ENST00000440653 C2orf50Q96LR7 162 aa7.8□□□□□ -1.16
HDAC6-209ENST00000440653 HDHD3Q9BSH5 251 aaPredicted RBP7.8□□□□□ -1.16
HDAC6-209ENST00000440653 FAAP24Q9BTP7 215 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms