RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 DEFA6Q01524 100 aa16.01■□□□□ 0.15
SHROOM1-204ENST00000440118 IL13RA2Q14627 380 aa16.01■□□□□ 0.15
SHROOM1-204ENST00000440118 LDLRAD2Q5SZI1 272 aa16.01■□□□□ 0.15
SHROOM1-204ENST00000440118 ELP2Q6IA86 826 aa16.01■□□□□ 0.15
SHROOM1-204ENST00000440118 OR52N1Q8NH53 320 aa16.01■□□□□ 0.15
SHROOM1-204ENST00000440118 CREB3L1Q96BA8 519 aa16.01■□□□□ 0.15
SHROOM1-204ENST00000440118 COQ2Q96H96 371 aa16.01■□□□□ 0.15
SHROOM1-204ENST00000440118 BARHL1Q9BZE3 327 aa16.01■□□□□ 0.15
SHROOM1-204ENST00000440118 PRSS22Q9GZN4 317 aa16.01■□□□□ 0.15
SHROOM1-204ENST00000440118 PPIL3Q9H2H8 161 aaKnown RBP16.01■□□□□ 0.15
SHROOM1-204ENST00000440118 CLEC2DQ9UHP7 191 aa16.01■□□□□ 0.15
SHROOM1-204ENST00000440118 EFCAB10A6NFE3 127 aa16■□□□□ 0.15
SHROOM1-204ENST00000440118 LEUTXA8MZ59 168 aa16■□□□□ 0.15
SHROOM1-204ENST00000440118 MYL12BO14950 172 aa16■□□□□ 0.15
SHROOM1-204ENST00000440118 CDRT1O95170 752 aa16■□□□□ 0.15
SHROOM1-204ENST00000440118 ALDOBP05062 364 aa16■□□□□ 0.15
SHROOM1-204ENST00000440118 JUNBP17275 347 aaPredicted RBP16■□□□□ 0.15
SHROOM1-204ENST00000440118 BRS3P32247 399 aa16■□□□□ 0.15
SHROOM1-204ENST00000440118 CAPGP40121 348 aa16■□□□□ 0.15
SHROOM1-204ENST00000440118 CEACAM3P40198 252 aa16■□□□□ 0.15
SHROOM1-204ENST00000440118 DYNLT3P51808 116 aa16■□□□□ 0.15
SHROOM1-204ENST00000440118 PIGYQ3MUY2 71 aa16■□□□□ 0.15
SHROOM1-204ENST00000440118 ZNF529Q6P280 563 aa16■□□□□ 0.15
SHROOM1-204ENST00000440118 BAIAP2L2Q6UXY1 529 aa16■□□□□ 0.15
SHROOM1-204ENST00000440118 ZFP41Q8N8Y5 198 aa16■□□□□ 0.15
SHROOM1-204ENST00000440118 ZNF565Q8N9K5 539 aa16■□□□□ 0.15
SHROOM1-204ENST00000440118 OR4P4Q8NGL7 312 aa16■□□□□ 0.15
SHROOM1-204ENST00000440118 OR13C5Q8NGS8 318 aa16■□□□□ 0.15
SHROOM1-204ENST00000440118 CORO2AQ92828 525 aa16■□□□□ 0.15
SHROOM1-204ENST00000440118 METTL9Q9H1A3 318 aa16■□□□□ 0.15
SHROOM1-204ENST00000440118 VCX3BQ9H321 246 aa16■□□□□ 0.15
SHROOM1-204ENST00000440118 PAK1IP1Q9NWT1 392 aaPredicted RBP16■□□□□ 0.15
SHROOM1-204ENST00000440118 DPM3Q9P2X0 92 aa16■□□□□ 0.15
SHROOM1-204ENST00000440118 KIF25Q9UIL4 384 aa16■□□□□ 0.15
SHROOM1-204ENST00000440118 HSPE1-MOB4S4R3N1 261 aa16■□□□□ 0.15
SHROOM1-204ENST00000440118 PNMA8CA0A1B0GUJ8 204 aa15.99■□□□□ 0.15
SHROOM1-204ENST00000440118 OR7C1O76099 320 aaPredicted RBP15.99■□□□□ 0.15
SHROOM1-204ENST00000440118 SERPINA2P20848 420 aa15.99■□□□□ 0.15
SHROOM1-204ENST00000440118 PRRX1P54821 245 aa15.99■□□□□ 0.15
SHROOM1-204ENST00000440118 TAS2R43P59537 309 aa15.99■□□□□ 0.15
SHROOM1-204ENST00000440118 ST3GAL4Q11206 333 aa15.99■□□□□ 0.15
SHROOM1-204ENST00000440118 HABP2Q14520 560 aaPredicted RBP15.99■□□□□ 0.15
SHROOM1-204ENST00000440118 YIF1BQ5BJH7 314 aa15.99■□□□□ 0.15
SHROOM1-204ENST00000440118 CCBE1Q6UXH8 406 aaPredicted RBP15.99■□□□□ 0.15
SHROOM1-204ENST00000440118 STX19Q8N4C7 294 aa15.99■□□□□ 0.15
SHROOM1-204ENST00000440118 OR51T1Q8NGJ9 327 aa15.99■□□□□ 0.15
SHROOM1-204ENST00000440118 GHSRQ92847 366 aa15.99■□□□□ 0.15
SHROOM1-204ENST00000440118 AKR1E2Q96JD6 320 aa15.99■□□□□ 0.15
SHROOM1-204ENST00000440118 ZNF702PQ9H963 129 aa15.99■□□□□ 0.15
SHROOM1-204ENST00000440118 ZNF286AQ9HBT8 521 aa15.99■□□□□ 0.15
SHROOM1-204ENST00000440118 SIRT4Q9Y6E7 314 aaPredicted RBP15.99■□□□□ 0.15
SHROOM1-204ENST00000440118 OGG1O15527 345 aa15.98■□□□□ 0.15
SHROOM1-204ENST00000440118 KCNAB3O43448 404 aa15.98■□□□□ 0.15
SHROOM1-204ENST00000440118 FBXO24O75426 580 aa15.98■□□□□ 0.15
SHROOM1-204ENST00000440118 C21orf33P30042 268 aaPredicted RBP15.98■□□□□ 0.15
SHROOM1-204ENST00000440118 KCNJ3P48549 501 aa15.98■□□□□ 0.15
SHROOM1-204ENST00000440118 ADARB1P78563 741 aaKnown RBP15.98■□□□□ 0.15
SHROOM1-204ENST00000440118 BDH1Q02338 343 aa15.98■□□□□ 0.15
SHROOM1-204ENST00000440118 Q499Y3 187 aa15.98■□□□□ 0.15
SHROOM1-204ENST00000440118 AHSA2Q719I0 299 aa15.98■□□□□ 0.15
SHROOM1-204ENST00000440118 OSR2Q8N2R0 312 aa15.98■□□□□ 0.15
SHROOM1-204ENST00000440118 NEK7Q8TDX7 302 aa15.98■□□□□ 0.15
SHROOM1-204ENST00000440118 GGHQ92820 318 aa15.98■□□□□ 0.15
SHROOM1-204ENST00000440118 OR5M11Q96RB7 305 aa15.98■□□□□ 0.15
SHROOM1-204ENST00000440118 ZNF184Q99676 751 aaPredicted RBP15.98■□□□□ 0.15
SHROOM1-204ENST00000440118 PCDHB16Q9NRJ7 776 aa15.98■□□□□ 0.15
SHROOM1-204ENST00000440118 CALYQ9NYX4 217 aa15.98■□□□□ 0.15
SHROOM1-204ENST00000440118 ST3GAL6Q9Y274 331 aa15.98■□□□□ 0.15
SHROOM1-204ENST00000440118 CMYA5Q8N3K9 4069 aa15.98■□□□□ 0.15
SHROOM1-204ENST00000440118 TRAV24A0A0B4J272 114 aa15.97■□□□□ 0.15
SHROOM1-204ENST00000440118 KBTBD11-OT1A0A1B0GTJ5 212 aa15.97■□□□□ 0.15
SHROOM1-204ENST00000440118 LALBAP00709 142 aa15.97■□□□□ 0.15
SHROOM1-204ENST00000440118 GDNFP39905 211 aa15.97■□□□□ 0.15
SHROOM1-204ENST00000440118 MNDAP41218 407 aa15.97■□□□□ 0.15
SHROOM1-204ENST00000440118 VDAC2P45880 294 aaPredicted RBP15.97■□□□□ 0.15
SHROOM1-204ENST00000440118 LTC4SQ16873 150 aa15.97■□□□□ 0.15
SHROOM1-204ENST00000440118 HLA-DRB5Q30154 266 aa15.97■□□□□ 0.15
SHROOM1-204ENST00000440118 CCDC144NLQ6NUI1 221 aa15.97■□□□□ 0.15
SHROOM1-204ENST00000440118 ORAI1Q96D31 301 aa15.97■□□□□ 0.15
SHROOM1-204ENST00000440118 DPCDQ9BVM2 203 aaPredicted RBP15.97■□□□□ 0.15
SHROOM1-204ENST00000440118 CNOT2Q9NZN8 540 aaKnown RBP15.97■□□□□ 0.15
SHROOM1-204ENST00000440118 AMMECR1Q9Y4X0 333 aaPredicted RBP15.97■□□□□ 0.15
SHROOM1-204ENST00000440118 XPNPEP2O43895 674 aa15.96■□□□□ 0.15
SHROOM1-204ENST00000440118 ZNF780AO75290 641 aaPredicted RBP15.96■□□□□ 0.15
SHROOM1-204ENST00000440118 GNAO1P09471 354 aa15.96■□□□□ 0.15
SHROOM1-204ENST00000440118 CD34P28906 385 aa15.96■□□□□ 0.15
SHROOM1-204ENST00000440118 RBM11P57052 281 aaKnown RBP15.96■□□□□ 0.15
SHROOM1-204ENST00000440118 SLC22A6Q4U2R8 563 aa15.96■□□□□ 0.15
SHROOM1-204ENST00000440118 ATAD3CQ5T2N8 411 aa15.96■□□□□ 0.15
SHROOM1-204ENST00000440118 OGFRL1Q5TC84 451 aaPredicted RBP15.96■□□□□ 0.15
SHROOM1-204ENST00000440118 DMKNQ6E0U4 476 aaPredicted RBP15.96■□□□□ 0.15
SHROOM1-204ENST00000440118 JAGN1Q8N5M9 183 aa15.96■□□□□ 0.15
SHROOM1-204ENST00000440118 BPIFB6Q8NFQ5 453 aa15.96■□□□□ 0.15
SHROOM1-204ENST00000440118 OR13A1Q8NGR1 328 aa15.96■□□□□ 0.15
SHROOM1-204ENST00000440118 OR9G1Q8NH87 305 aa15.96■□□□□ 0.15
SHROOM1-204ENST00000440118 MRGPRDQ8TDS7 321 aa15.96■□□□□ 0.15
SHROOM1-204ENST00000440118 RPEQ96AT9 228 aa15.96■□□□□ 0.15
SHROOM1-204ENST00000440118 OR14A2Q96R54 314 aa15.96■□□□□ 0.15
SHROOM1-204ENST00000440118 IL36GQ9NZH8 169 aa15.96■□□□□ 0.15
SHROOM1-204ENST00000440118 MEGF11A6BM72 1044 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms