RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 AWAT2Q6E213 333 aa8.52□□□□□ -1.05
MCF2L-216ENST00000439475 OR10K1Q8NGX5 313 aa8.52□□□□□ -1.05
MCF2L-216ENST00000439475 SGMS2Q8NHU3 365 aa8.52□□□□□ -1.05
MCF2L-216ENST00000439475 ZNF596Q8TC21 504 aa8.52□□□□□ -1.05
MCF2L-216ENST00000439475 ORAI1Q96D31 301 aa8.52□□□□□ -1.05
MCF2L-216ENST00000439475 CNBD2Q96M20 576 aa8.52□□□□□ -1.05
MCF2L-216ENST00000439475 DERL3Q96Q80 235 aa8.52□□□□□ -1.05
MCF2L-216ENST00000439475 CLEC7AQ9BXN2 247 aa8.52□□□□□ -1.05
MCF2L-216ENST00000439475 SLITRK2Q9H156 845 aa8.52□□□□□ -1.05
MCF2L-216ENST00000439475 TMEM133Q9H2Q1 129 aa8.52□□□□□ -1.05
MCF2L-216ENST00000439475 Q9H521 79 aa8.52□□□□□ -1.05
MCF2L-216ENST00000439475 SPACA1Q9HBV2 294 aa8.52□□□□□ -1.05
MCF2L-216ENST00000439475 ISYNA1Q9NPH2 558 aa8.52□□□□□ -1.05
MCF2L-216ENST00000439475 ING3Q9NXR8 418 aa8.52□□□□□ -1.05
MCF2L-216ENST00000439475 C1RLQ9NZP8 487 aa8.52□□□□□ -1.05
MCF2L-216ENST00000439475 GHRLQ9UBU3 117 aa8.52□□□□□ -1.05
MCF2L-216ENST00000439475 MRPS28Q9Y2Q9 187 aaKnown RBP8.52□□□□□ -1.05
MCF2L-216ENST00000439475 MINOS1-NBL1R4GNA1 71 aa8.52□□□□□ -1.05
MCF2L-216ENST00000439475 COL6A5A8TX70 2615 aa8.52□□□□□ -1.05
MCF2L-216ENST00000439475 MEIKINA0A087WXM9 373 aa8.51□□□□□ -1.05
MCF2L-216ENST00000439475 MEX3AA1L020 520 aaKnown RBP8.51□□□□□ -1.05
MCF2L-216ENST00000439475 CLPSL1A2RUU4 121 aa8.51□□□□□ -1.05
MCF2L-216ENST00000439475 FAM90A8PA6NJQ4 464 aa8.51□□□□□ -1.05
MCF2L-216ENST00000439475 H3BUX3 64 aa8.51□□□□□ -1.05
MCF2L-216ENST00000439475 TOR1AO14656 332 aa8.51□□□□□ -1.05
MCF2L-216ENST00000439475 CLPXO76031 633 aa8.51□□□□□ -1.05
MCF2L-216ENST00000439475 HSMCR30P0CW71 290 aa8.51□□□□□ -1.05
MCF2L-216ENST00000439475 GZMHP20718 246 aa8.51□□□□□ -1.05
MCF2L-216ENST00000439475 OMGP23515 440 aa8.51□□□□□ -1.05
MCF2L-216ENST00000439475 PSMA1P25786 263 aaKnown RBP8.51□□□□□ -1.05
MCF2L-216ENST00000439475 HTR1DP28221 377 aa8.51□□□□□ -1.05
MCF2L-216ENST00000439475 ARHGDIBP52566 201 aa8.51□□□□□ -1.05
MCF2L-216ENST00000439475 PRRX1P54821 245 aa8.51□□□□□ -1.05
MCF2L-216ENST00000439475 RBM39Q14498 530 aaKnown RBP8.51□□□□□ -1.05
MCF2L-216ENST00000439475 ATXN7L3Q14CW9 347 aaPredicted RBP8.51□□□□□ -1.05
MCF2L-216ENST00000439475 FAM189A2Q15884 450 aa8.51□□□□□ -1.05
MCF2L-216ENST00000439475 TAF9Q16594 264 aa8.51□□□□□ -1.05
MCF2L-216ENST00000439475 SLC22A6Q4U2R8 563 aa8.51□□□□□ -1.05
MCF2L-216ENST00000439475 NHLRC3Q5JS37 347 aa8.51□□□□□ -1.05
MCF2L-216ENST00000439475 ATAD3CQ5T2N8 411 aa8.51□□□□□ -1.05
MCF2L-216ENST00000439475 OLFML2AQ68BL7 652 aa8.51□□□□□ -1.05
MCF2L-216ENST00000439475 GLIPR1L1Q6UWM5 242 aa8.51□□□□□ -1.05
MCF2L-216ENST00000439475 UNQ9370/PRO34162Q6UXP9 181 aa8.51□□□□□ -1.05
MCF2L-216ENST00000439475 HEPN1Q6WQI6 88 aa8.51□□□□□ -1.05
MCF2L-216ENST00000439475 PRSS48Q7RTY5 328 aa8.51□□□□□ -1.05
MCF2L-216ENST00000439475 NDNFQ8TB73 568 aa8.51□□□□□ -1.05
MCF2L-216ENST00000439475 PHYHIPQ92561 330 aa8.51□□□□□ -1.05
MCF2L-216ENST00000439475 MUL1Q969V5 352 aa8.51□□□□□ -1.05
MCF2L-216ENST00000439475 CREB3L1Q96BA8 519 aa8.51□□□□□ -1.05
MCF2L-216ENST00000439475 OR5M11Q96RB7 305 aa8.51□□□□□ -1.05
MCF2L-216ENST00000439475 UQCC2Q9BRT2 126 aa8.51□□□□□ -1.05
MCF2L-216ENST00000439475 TMED9Q9BVK6 235 aa8.51□□□□□ -1.05
MCF2L-216ENST00000439475 PITPNC1Q9UKF7 332 aa8.51□□□□□ -1.05
MCF2L-216ENST00000439475 FBN1P35555 2871 aaKnown RBP8.5□□□□□ -1.05
MCF2L-216ENST00000439475 TRAV8-7A0A075B6U6 113 aa8.5□□□□□ -1.05
MCF2L-216ENST00000439475 IGHV2-26A0A0B4J1V2 119 aa8.5□□□□□ -1.05
MCF2L-216ENST00000439475 TRAV24A0A0B4J272 114 aa8.5□□□□□ -1.05
MCF2L-216ENST00000439475 MCRIP1C9JLW8 97 aa8.5□□□□□ -1.05
MCF2L-216ENST00000439475 HSPB6O14558 160 aa8.5□□□□□ -1.05
MCF2L-216ENST00000439475 MDKP21741 143 aaPredicted RBP8.5□□□□□ -1.05
MCF2L-216ENST00000439475 CRHBPP24387 322 aa8.5□□□□□ -1.05
MCF2L-216ENST00000439475 CDK2P24941 298 aa8.5□□□□□ -1.05
MCF2L-216ENST00000439475 CEACAM3P40198 252 aa8.5□□□□□ -1.05
MCF2L-216ENST00000439475 RBM11P57052 281 aaKnown RBP8.5□□□□□ -1.05
MCF2L-216ENST00000439475 MLLT11Q13015 90 aaPredicted RBP8.5□□□□□ -1.05
MCF2L-216ENST00000439475 IRF3Q14653 427 aa8.5□□□□□ -1.05
MCF2L-216ENST00000439475 SSX2Q16385 188 aa8.5□□□□□ -1.05
MCF2L-216ENST00000439475 PIGYQ3MUY2 71 aa8.5□□□□□ -1.05
MCF2L-216ENST00000439475 HSD17B12Q53GQ0 312 aa8.5□□□□□ -1.05
MCF2L-216ENST00000439475 SLC35E4Q6ICL7 350 aa8.5□□□□□ -1.05
MCF2L-216ENST00000439475 LIAT1Q6ZQX7 453 aa8.5□□□□□ -1.05
MCF2L-216ENST00000439475 TCF23Q7RTU1 214 aa8.5□□□□□ -1.05
MCF2L-216ENST00000439475 CEACAM19Q7Z692 300 aa8.5□□□□□ -1.05
MCF2L-216ENST00000439475 ABHD12Q8N2K0 398 aa8.5□□□□□ -1.05
MCF2L-216ENST00000439475 SUMF2Q8NBJ7 301 aa8.5□□□□□ -1.05
MCF2L-216ENST00000439475 NEK7Q8TDX7 302 aa8.5□□□□□ -1.05
MCF2L-216ENST00000439475 DPCDQ9BVM2 203 aaPredicted RBP8.5□□□□□ -1.05
MCF2L-216ENST00000439475 IFT22Q9H7X7 185 aa8.5□□□□□ -1.05
MCF2L-216ENST00000439475 RAB9BQ9NP90 201 aa8.5□□□□□ -1.05
MCF2L-216ENST00000439475 KBTBD11-OT1A0A1B0GTJ5 212 aa8.49□□□□□ -1.05
MCF2L-216ENST00000439475 ODF3BA8MYP8 253 aa8.49□□□□□ -1.05
MCF2L-216ENST00000439475 LEUTXA8MZ59 168 aa8.49□□□□□ -1.05
MCF2L-216ENST00000439475 GEMIN2O14893 280 aaKnown RBP8.49□□□□□ -1.05
MCF2L-216ENST00000439475 PIN1P1O15428 100 aa8.49□□□□□ -1.05
MCF2L-216ENST00000439475 MRPS14O60783 128 aaKnown RBP8.49□□□□□ -1.05
MCF2L-216ENST00000439475 ARL6IP5O75915 188 aa8.49□□□□□ -1.05
MCF2L-216ENST00000439475 UBBP0CG47 229 aa8.49□□□□□ -1.05
MCF2L-216ENST00000439475 SRMP19623 302 aa8.49□□□□□ -1.05
MCF2L-216ENST00000439475 BRS3P32247 399 aa8.49□□□□□ -1.05
MCF2L-216ENST00000439475 GLP1RP43220 463 aa8.49□□□□□ -1.05
MCF2L-216ENST00000439475 PAX5Q02548 391 aa8.49□□□□□ -1.05
MCF2L-216ENST00000439475 TPBGQ13641 420 aa8.49□□□□□ -1.05
MCF2L-216ENST00000439475 LY6EQ16553 131 aa8.49□□□□□ -1.05
MCF2L-216ENST00000439475 LIPKQ5VXJ0 399 aa8.49□□□□□ -1.05
MCF2L-216ENST00000439475 LHFPL4Q7Z7J7 247 aa8.49□□□□□ -1.05
MCF2L-216ENST00000439475 OR10A7Q8NGE5 316 aa8.49□□□□□ -1.05
MCF2L-216ENST00000439475 C17orf50Q8WW18 174 aa8.49□□□□□ -1.05
MCF2L-216ENST00000439475 COQ2Q96H96 371 aa8.49□□□□□ -1.05
MCF2L-216ENST00000439475 MGLLQ99685 303 aa8.49□□□□□ -1.05
MCF2L-216ENST00000439475 NKX3-1Q99801 234 aaPredicted RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms