RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 BAGE2Q86Y30 109 aa13.82□□□□□ -0.2
DHFR-201ENST00000439211 ZNF721Q8TF20 911 aa13.82□□□□□ -0.2
DHFR-201ENST00000439211 C8orf44Q96CB5 159 aa13.82□□□□□ -0.2
DHFR-201ENST00000439211 IGLV1-36A0A0B4J1U3 117 aa13.82□□□□□ -0.2
DHFR-201ENST00000439211 IL18BPO95998 194 aa13.82□□□□□ -0.2
DHFR-201ENST00000439211 CCR5P51681 352 aa13.82□□□□□ -0.2
DHFR-201ENST00000439211 TMEM176BQ3YBM2 270 aaPredicted RBP13.82□□□□□ -0.2
DHFR-201ENST00000439211 PHF19Q5T6S3 580 aa13.82□□□□□ -0.2
DHFR-201ENST00000439211 APH1AQ96BI3 265 aa13.82□□□□□ -0.2
DHFR-201ENST00000439211 GPR84Q9NQS5 396 aa13.82□□□□□ -0.2
DHFR-201ENST00000439211 FIGNL2A6NMB9 653 aa13.81□□□□□ -0.2
DHFR-201ENST00000439211 ZNF850A8MQ14 1090 aa13.81□□□□□ -0.2
DHFR-201ENST00000439211 IFNL4K9M1U5 179 aa13.81□□□□□ -0.2
DHFR-201ENST00000439211 IFNA1P01562 189 aa13.81□□□□□ -0.2
DHFR-201ENST00000439211 CDC34P49427 236 aaPredicted RBP13.81□□□□□ -0.2
DHFR-201ENST00000439211 CNN1P51911 297 aaKnown RBP13.81□□□□□ -0.2
DHFR-201ENST00000439211 IGLV3-21P80748 117 aaPredicted RBP13.81□□□□□ -0.2
DHFR-201ENST00000439211 KCNIP4Q6PIL6 250 aa13.81□□□□□ -0.2
DHFR-201ENST00000439211 ERASQ7Z444 233 aa13.81□□□□□ -0.2
DHFR-201ENST00000439211 RPS4Y2Q8TD47 263 aa13.81□□□□□ -0.2
DHFR-201ENST00000439211 LIN37Q96GY3 246 aaPredicted RBP13.81□□□□□ -0.2
DHFR-201ENST00000439211 ZNF845Q96IR2 970 aaPredicted RBP13.81□□□□□ -0.2
DHFR-201ENST00000439211 CHD9Q3L8U1 2897 aa13.81□□□□□ -0.2
DHFR-201ENST00000439211 AHCTF1Q8WYP5 2266 aa13.81□□□□□ -0.2
DHFR-201ENST00000439211 CACNA1DQ01668 2161 aa13.81□□□□□ -0.2
DHFR-201ENST00000439211 LDLRAD2Q5SZI1 272 aa13.81□□□□□ -0.2
DHFR-201ENST00000439211 SLC25A26Q70HW3 274 aa13.81□□□□□ -0.2
DHFR-201ENST00000439211 GBGT1Q8N5D6 347 aa13.81□□□□□ -0.2
DHFR-201ENST00000439211 OR2I1PQ8NGU4 316 aa13.81□□□□□ -0.2
DHFR-201ENST00000439211 SCGB1C1Q8TD33 95 aa13.81□□□□□ -0.2
DHFR-201ENST00000439211 ADAT3Q96EY9 351 aaPredicted RBP13.81□□□□□ -0.2
DHFR-201ENST00000439211 NICN1Q9BSH3 213 aa13.81□□□□□ -0.2
DHFR-201ENST00000439211 OR51I2Q9H344 312 aa13.81□□□□□ -0.2
DHFR-201ENST00000439211 CHST11Q9NPF2 352 aa13.81□□□□□ -0.2
DHFR-201ENST00000439211 B3GAT1Q9P2W7 334 aa13.81□□□□□ -0.2
DHFR-201ENST00000439211 FAM24AA6NFZ4 105 aa13.81□□□□□ -0.2
DHFR-201ENST00000439211 HSPB1P04792 205 aaKnown RBP13.81□□□□□ -0.2
DHFR-201ENST00000439211 BLVRBP30043 206 aaPredicted RBP13.81□□□□□ -0.2
DHFR-201ENST00000439211 RBMXL1Q96E39 390 aaKnown RBP13.81□□□□□ -0.2
DHFR-201ENST00000439211 RBM24Q9BX46 236 aaKnown RBP13.81□□□□□ -0.2
DHFR-201ENST00000439211 RYDENQ9NUL5 291 aaKnown RBP13.81□□□□□ -0.2
DHFR-201ENST00000439211 A0A1B0GX78 115 aa13.8□□□□□ -0.2
DHFR-201ENST00000439211 C2CD4DB7Z1M9 353 aa13.8□□□□□ -0.2
DHFR-201ENST00000439211 NXPH3O95157 252 aa13.8□□□□□ -0.2
DHFR-201ENST00000439211 IGHG1P01857 330 aa13.8□□□□□ -0.2
DHFR-201ENST00000439211 ZNF260Q3ZCT1 412 aa13.8□□□□□ -0.2
DHFR-201ENST00000439211 PHLDA2Q53GA4 152 aa13.8□□□□□ -0.2
DHFR-201ENST00000439211 CMTM2Q8TAZ6 248 aa13.8□□□□□ -0.2
DHFR-201ENST00000439211 DEFB126Q9BYW3 111 aa13.8□□□□□ -0.2
DHFR-201ENST00000439211 CLEC1BQ9P126 229 aa13.8□□□□□ -0.2
DHFR-201ENST00000439211 TRAPPC1Q9Y5R8 145 aa13.8□□□□□ -0.2
DHFR-201ENST00000439211 RFNGQ9Y644 331 aa13.8□□□□□ -0.2
DHFR-201ENST00000439211 M0QZ24 198 aa13.8□□□□□ -0.2
DHFR-201ENST00000439211 HLA-HP01893 362 aa13.8□□□□□ -0.2
DHFR-201ENST00000439211 FASLGP48023 281 aa13.8□□□□□ -0.2
DHFR-201ENST00000439211 ADIPOR1Q96A54 375 aa13.8□□□□□ -0.2
DHFR-201ENST00000439211 RNF150Q9ULK6 438 aa13.8□□□□□ -0.2
DHFR-201ENST00000439211 ZNF217O75362 1048 aa13.8□□□□□ -0.2
DHFR-201ENST00000439211 TMEM225BP0DP42 221 aa13.8□□□□□ -0.2
DHFR-201ENST00000439211 OGFOD3Q6PK18 319 aa13.8□□□□□ -0.2
DHFR-201ENST00000439211 C16orf82Q7Z2V1 217 aa13.8□□□□□ -0.2
DHFR-201ENST00000439211 KCNG3Q8TAE7 436 aa13.8□□□□□ -0.2
DHFR-201ENST00000439211 ZNF160Q9HCG1 818 aa13.8□□□□□ -0.2
DHFR-201ENST00000439211 A0A1W2PP11 408 aa13.79□□□□□ -0.2
DHFR-201ENST00000439211 MAP1LC3B2A6NCE7 125 aa13.79□□□□□ -0.2
DHFR-201ENST00000439211 RER1O15258 196 aa13.79□□□□□ -0.2
DHFR-201ENST00000439211 TPPP2P59282 170 aa13.79□□□□□ -0.2
DHFR-201ENST00000439211 TAS2R46P59540 309 aa13.79□□□□□ -0.2
DHFR-201ENST00000439211 FBXW9Q5XUX1 488 aa13.79□□□□□ -0.2
DHFR-201ENST00000439211 AQP3Q92482 292 aa13.79□□□□□ -0.2
DHFR-201ENST00000439211 MAP1LC3BQ9GZQ8 125 aa13.79□□□□□ -0.2
DHFR-201ENST00000439211 MAGT1Q9H0U3 335 aa13.79□□□□□ -0.2
DHFR-201ENST00000439211 LYRM2Q9NU23 88 aaPredicted RBP13.79□□□□□ -0.2
DHFR-201ENST00000439211 BET1LQ9NYM9 111 aa13.79□□□□□ -0.2
DHFR-201ENST00000439211 PHF3Q92576 2039 aaKnown RBP13.79□□□□□ -0.2
DHFR-201ENST00000439211 G3V3Y1 287 aa13.79□□□□□ -0.2
DHFR-201ENST00000439211 UMODP07911 640 aa13.79□□□□□ -0.2
DHFR-201ENST00000439211 IFI6P09912 130 aa13.79□□□□□ -0.2
DHFR-201ENST00000439211 VSIG8P0DPA2 414 aa13.79□□□□□ -0.2
DHFR-201ENST00000439211 APOBEC1P41238 236 aaKnown RBP13.79□□□□□ -0.2
DHFR-201ENST00000439211 CSNK1A1P48729 337 aa13.79□□□□□ -0.2
DHFR-201ENST00000439211 FGF8P55075 233 aaPredicted RBP13.79□□□□□ -0.2
DHFR-201ENST00000439211 ZNF787Q6DD87 383 aa13.79□□□□□ -0.2
DHFR-201ENST00000439211 OR2T10Q8NGZ9 312 aa13.79□□□□□ -0.2
DHFR-201ENST00000439211 LIPHQ8WWY8 451 aa13.79□□□□□ -0.2
DHFR-201ENST00000439211 CLDN16Q9Y5I7 305 aa13.79□□□□□ -0.2
DHFR-201ENST00000439211 LILRA5A6NI73 299 aa13.79□□□□□ -0.2
DHFR-201ENST00000439211 ROM1Q03395 351 aa13.79□□□□□ -0.2
DHFR-201ENST00000439211 PRR27Q6MZM9 219 aa13.79□□□□□ -0.2
DHFR-201ENST00000439211 PIGTQ969N2 578 aa13.79□□□□□ -0.2
DHFR-201ENST00000439211 KLHL13Q9P2N7 655 aa13.79□□□□□ -0.2
DHFR-201ENST00000439211 SRPK3Q9UPE1 567 aa13.79□□□□□ -0.2
DHFR-201ENST00000439211 SLC5A6Q9Y289 635 aa13.79□□□□□ -0.2
DHFR-201ENST00000439211 NKX6-3A6NJ46 265 aa13.78□□□□□ -0.2
DHFR-201ENST00000439211 SOCS1O15524 211 aa13.78□□□□□ -0.2
DHFR-201ENST00000439211 DXOO77932 396 aaKnown RBP13.78□□□□□ -0.2
DHFR-201ENST00000439211 CD27P26842 260 aa13.78□□□□□ -0.2
DHFR-201ENST00000439211 RUNX1Q01196 453 aa13.78□□□□□ -0.2
DHFR-201ENST00000439211 HOXB13Q92826 284 aaPredicted RBP13.78□□□□□ -0.2
DHFR-201ENST00000439211 P4HTMQ9NXG6 502 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms