RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 CEACAM8P31997 349 aaPredicted RBP21.84■■□□□ 1.09
CPNE1-216ENST00000437340 ZNF718Q3SXZ3 478 aa21.84■■□□□ 1.09
CPNE1-216ENST00000437340 TIMM23BQ5SRD1 257 aa21.84■■□□□ 1.09
CPNE1-216ENST00000437340 MBNL2Q5VZF2 373 aaKnown RBP21.84■■□□□ 1.09
CPNE1-216ENST00000437340 RTN4IP1Q8WWV3 396 aaPredicted RBP21.84■■□□□ 1.09
CPNE1-216ENST00000437340 TREM2Q9NZC2 230 aa21.84■■□□□ 1.09
CPNE1-216ENST00000437340 SVILO95425 2214 aa21.83■■□□□ 1.09
CPNE1-216ENST00000437340 AADACP22760 399 aa21.83■■□□□ 1.09
CPNE1-216ENST00000437340 MDH2P40926 338 aaKnown RBP21.83■■□□□ 1.09
CPNE1-216ENST00000437340 C3orf36Q3SXR2 165 aa21.83■■□□□ 1.09
CPNE1-216ENST00000437340 IGSF11Q5DX21 431 aa21.83■■□□□ 1.09
CPNE1-216ENST00000437340 ZNF880Q6PDB4 577 aa21.83■■□□□ 1.09
CPNE1-216ENST00000437340 ZNF474Q6S9Z5 364 aaPredicted RBP21.83■■□□□ 1.09
CPNE1-216ENST00000437340 SPERTQ8NA61 448 aa21.83■■□□□ 1.09
CPNE1-216ENST00000437340 Q8NA96 180 aa21.83■■□□□ 1.09
CPNE1-216ENST00000437340 MRPL30Q8TCC3 161 aaKnown RBP21.83■■□□□ 1.09
CPNE1-216ENST00000437340 SUCNR1Q9BXA5 334 aa21.83■■□□□ 1.09
CPNE1-216ENST00000437340 MBD2Q9UBB5 411 aa21.83■■□□□ 1.09
CPNE1-216ENST00000437340 MEMO1Q9Y316 297 aa21.83■■□□□ 1.09
CPNE1-216ENST00000437340 RNF222A6NCQ9 220 aa21.82■■□□□ 1.08
CPNE1-216ENST00000437340 ZNF205O95201 554 aa21.82■■□□□ 1.08
CPNE1-216ENST00000437340 DIRAS3O95661 229 aa21.82■■□□□ 1.08
CPNE1-216ENST00000437340 AP2S1P53680 142 aaPredicted RBP21.82■■□□□ 1.08
CPNE1-216ENST00000437340 ZNF146Q15072 292 aa21.82■■□□□ 1.08
CPNE1-216ENST00000437340 C1QTNF12Q5T7M4 302 aa21.82■■□□□ 1.08
CPNE1-216ENST00000437340 CCDC71LQ8N9Z2 235 aa21.82■■□□□ 1.08
CPNE1-216ENST00000437340 POC1AQ8NBT0 407 aa21.82■■□□□ 1.08
CPNE1-216ENST00000437340 INO80EQ8NBZ0 244 aaPredicted RBP21.82■■□□□ 1.08
CPNE1-216ENST00000437340 SLC2A9Q9NRM0 540 aa21.82■■□□□ 1.08
CPNE1-216ENST00000437340 AUP1Q9Y679 476 aa21.82■■□□□ 1.08
CPNE1-216ENST00000437340 ZZEF1O43149 2961 aa21.82■■□□□ 1.08
CPNE1-216ENST00000437340 HSPB6O14558 160 aa21.82■■□□□ 1.08
CPNE1-216ENST00000437340 CDIPTO14735 213 aa21.82■■□□□ 1.08
CPNE1-216ENST00000437340 HS3ST1O14792 307 aa21.82■■□□□ 1.08
CPNE1-216ENST00000437340 ZNF44P15621 663 aa21.82■■□□□ 1.08
CPNE1-216ENST00000437340 GCH1P30793 250 aa21.82■■□□□ 1.08
CPNE1-216ENST00000437340 IL15RAQ13261 267 aa21.82■■□□□ 1.08
CPNE1-216ENST00000437340 SHEQ5VZ18 495 aa21.82■■□□□ 1.08
CPNE1-216ENST00000437340 RPRMLQ8N4K4 120 aa21.82■■□□□ 1.08
CPNE1-216ENST00000437340 SCARB1Q8WTV0 552 aa21.82■■□□□ 1.08
CPNE1-216ENST00000437340 CXXC4Q9H2H0 198 aa21.82■■□□□ 1.08
CPNE1-216ENST00000437340 KANTRA0A1W2PQU2 76 aa21.81■■□□□ 1.08
CPNE1-216ENST00000437340 H7C1Q1 480 aa21.81■■□□□ 1.08
CPNE1-216ENST00000437340 LYL1P12980 280 aa21.81■■□□□ 1.08
CPNE1-216ENST00000437340 UBA52P62987 128 aaKnown RBP21.81■■□□□ 1.08
CPNE1-216ENST00000437340 IGFBP7Q16270 282 aa21.81■■□□□ 1.08
CPNE1-216ENST00000437340 SPIN3Q5JUX0 258 aa21.81■■□□□ 1.08
CPNE1-216ENST00000437340 C6orf183Q5T699 404 aa21.81■■□□□ 1.08
CPNE1-216ENST00000437340 FAM185AQ8N0U4 392 aa21.81■■□□□ 1.08
CPNE1-216ENST00000437340 LRTM2Q8N967 370 aa21.81■■□□□ 1.08
CPNE1-216ENST00000437340 OR5T2Q8NGG2 359 aa21.81■■□□□ 1.08
CPNE1-216ENST00000437340 RDH5Q92781 318 aa21.81■■□□□ 1.08
CPNE1-216ENST00000437340 OR10C1Q96KK4 312 aa21.81■■□□□ 1.08
CPNE1-216ENST00000437340 TMEM165Q9HC07 324 aa21.81■■□□□ 1.08
CPNE1-216ENST00000437340 RASL12Q9NYN1 266 aa21.81■■□□□ 1.08
CPNE1-216ENST00000437340 KIF25Q9UIL4 384 aa21.81■■□□□ 1.08
CPNE1-216ENST00000437340 TINAGQ9UJW2 476 aa21.81■■□□□ 1.08
CPNE1-216ENST00000437340 H0YL77 283 aa21.8■■□□□ 1.08
CPNE1-216ENST00000437340 MLNRO43193 412 aa21.8■■□□□ 1.08
CPNE1-216ENST00000437340 BCL2L11O43521 198 aa21.8■■□□□ 1.08
CPNE1-216ENST00000437340 TIMM8AO60220 97 aaPredicted RBP21.8■■□□□ 1.08
CPNE1-216ENST00000437340 HOXB5P09067 269 aa21.8■■□□□ 1.08
CPNE1-216ENST00000437340 SCTP09683 121 aa21.8■■□□□ 1.08
CPNE1-216ENST00000437340 PET100P0DJ07 73 aa21.8■■□□□ 1.08
CPNE1-216ENST00000437340 TMEM187Q14656 261 aa21.8■■□□□ 1.08
CPNE1-216ENST00000437340 RNF126Q9BV68 326 aa21.8■■□□□ 1.08
CPNE1-216ENST00000437340 ESPL1Q14674 2120 aa21.8■■□□□ 1.08
CPNE1-216ENST00000437340 A0A1B0GWJ7 208 aa21.79■■□□□ 1.08
CPNE1-216ENST00000437340 MPTX1A8MV57 137 aa21.79■■□□□ 1.08
CPNE1-216ENST00000437340 TUSC2O75896 110 aa21.79■■□□□ 1.08
CPNE1-216ENST00000437340 IFNA21P01568 189 aa21.79■■□□□ 1.08
CPNE1-216ENST00000437340 NAAAQ02083 359 aa21.79■■□□□ 1.08
CPNE1-216ENST00000437340 ATXN7L3Q14CW9 347 aaPredicted RBP21.79■■□□□ 1.08
CPNE1-216ENST00000437340 PRSS54Q6PEW0 395 aa21.79■■□□□ 1.08
CPNE1-216ENST00000437340 TLNRD1Q9H1K6 362 aa21.79■■□□□ 1.08
CPNE1-216ENST00000437340 SHANK1Q9Y566 2161 aa21.79■■□□□ 1.08
CPNE1-216ENST00000437340 NXPH2O95156 264 aa21.79■■□□□ 1.08
CPNE1-216ENST00000437340 FIP1L1Q6UN15 594 aaKnown RBP21.79■■□□□ 1.08
CPNE1-216ENST00000437340 OR4A4PQ8NGN8 299 aa21.79■■□□□ 1.08
CPNE1-216ENST00000437340 HES4Q9HCC6 221 aa21.79■■□□□ 1.08
CPNE1-216ENST00000437340 TUBD1Q9UJT1 453 aa21.79■■□□□ 1.08
CPNE1-216ENST00000437340 PCDHB10Q9UN67 800 aa21.79■■□□□ 1.08
CPNE1-216ENST00000437340 DSPP15924 2871 aaKnown RBP21.78■■□□□ 1.08
CPNE1-216ENST00000437340 OR2H2O95918 312 aa21.78■■□□□ 1.08
CPNE1-216ENST00000437340 GRPP07492 148 aa21.78■■□□□ 1.08
CPNE1-216ENST00000437340 OR5AC1P0C628 307 aa21.78■■□□□ 1.08
CPNE1-216ENST00000437340 KCNJ3P48549 501 aa21.78■■□□□ 1.08
CPNE1-216ENST00000437340 TDGF1P3P51864 188 aa21.78■■□□□ 1.08
CPNE1-216ENST00000437340 HERPUD1Q15011 391 aa21.78■■□□□ 1.08
CPNE1-216ENST00000437340 MOB1BQ7L9L4 216 aa21.78■■□□□ 1.08
CPNE1-216ENST00000437340 S100PBPQ96BU1 408 aa21.78■■□□□ 1.08
CPNE1-216ENST00000437340 LEUTXA8MZ59 168 aa21.77■■□□□ 1.08
CPNE1-216ENST00000437340 SH2D1BO14796 132 aa21.77■■□□□ 1.08
CPNE1-216ENST00000437340 BET1O15155 118 aa21.77■■□□□ 1.08
CPNE1-216ENST00000437340 GLI4P10075 376 aa21.77■■□□□ 1.08
CPNE1-216ENST00000437340 HLA-DRB3P79483 266 aa21.77■■□□□ 1.08
CPNE1-216ENST00000437340 MZT1Q08AG7 82 aa21.77■■□□□ 1.08
CPNE1-216ENST00000437340 PHLDA2Q53GA4 152 aa21.77■■□□□ 1.08
CPNE1-216ENST00000437340 ESCO2Q56NI9 601 aa21.77■■□□□ 1.08
CPNE1-216ENST00000437340 PAN3Q58A45 887 aaKnown RBP21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms