RNA–Protein interactions for RNA: ENST00000436461.6

CALD1-209, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 1,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-209ENST00000436461 MCRIP1C9JLW8 97 aa13.9□□□□□ -0.19
CALD1-209ENST00000436461 GLIPR1P48060 266 aa13.9□□□□□ -0.19
CALD1-209ENST00000436461 DYNC1I2Q13409 638 aaKnown RBP13.9□□□□□ -0.19
CALD1-209ENST00000436461 GDPD3Q7L5L3 318 aa13.9□□□□□ -0.19
CALD1-209ENST00000436461 HDHD3Q9BSH5 251 aaPredicted RBP13.9□□□□□ -0.19
CALD1-209ENST00000436461 DCTN5Q9BTE1 182 aa13.9□□□□□ -0.19
CALD1-209ENST00000436461 FAM234AQ9H0X4 552 aa13.9□□□□□ -0.19
CALD1-209ENST00000436461 C19orf12Q9NSK7 152 aa13.9□□□□□ -0.19
CALD1-209ENST00000436461 TRAV39A0A0B4J263 110 aa13.89□□□□□ -0.19
CALD1-209ENST00000436461 APOA1P02647 267 aa13.89□□□□□ -0.19
CALD1-209ENST00000436461 HEXAP06865 529 aa13.89□□□□□ -0.19
CALD1-209ENST00000436461 TMEM249Q2WGJ8 235 aa13.89□□□□□ -0.19
CALD1-209ENST00000436461 KRBOX4Q5JUW0 171 aa13.89□□□□□ -0.19
CALD1-209ENST00000436461 PPP1R35Q8TAP8 253 aa13.89□□□□□ -0.19
CALD1-209ENST00000436461 GCDHQ92947 438 aaPredicted RBP13.89□□□□□ -0.19
CALD1-209ENST00000436461 PHF21AQ96BD5 680 aa13.89□□□□□ -0.19
CALD1-209ENST00000436461 S100A16Q96FQ6 103 aaKnown RBP13.89□□□□□ -0.19
CALD1-209ENST00000436461 SPACA1Q9HBV2 294 aa13.89□□□□□ -0.19
CALD1-209ENST00000436461 MMP26Q9NRE1 261 aa13.89□□□□□ -0.19
CALD1-209ENST00000436461 TRAV18A0A075B6X5 111 aa13.88□□□□□ -0.19
CALD1-209ENST00000436461 MFNGO00587 321 aa13.88□□□□□ -0.19
CALD1-209ENST00000436461 MGST3O14880 152 aa13.88□□□□□ -0.19
CALD1-209ENST00000436461 HIST1H1DP16402 221 aaKnown RBP13.88□□□□□ -0.19
CALD1-209ENST00000436461 NPY4RP50391 375 aa13.88□□□□□ -0.19
CALD1-209ENST00000436461 RSBN1Q5VWQ0 802 aaPredicted RBP13.88□□□□□ -0.19
CALD1-209ENST00000436461 RAB40AQ8WXH6 277 aa13.88□□□□□ -0.19
CALD1-209ENST00000436461 ETAA1Q9NY74 926 aa13.88□□□□□ -0.19
CALD1-209ENST00000436461 EXTL2Q9UBQ6 330 aa13.88□□□□□ -0.19
CALD1-209ENST00000436461 AK3Q9UIJ7 227 aa13.88□□□□□ -0.19
CALD1-209ENST00000436461 WNK2Q9Y3S1 2297 aa13.88□□□□□ -0.19
CALD1-209ENST00000436461 TMEM235A6NFC5 223 aa13.87□□□□□ -0.19
CALD1-209ENST00000436461 CSN2P05814 226 aa13.87□□□□□ -0.19
CALD1-209ENST00000436461 IGHV4-31P0DP07 118 aa13.87□□□□□ -0.19
CALD1-209ENST00000436461 CDNFQ49AH0 187 aa13.87□□□□□ -0.19
CALD1-209ENST00000436461 TMEM69Q5SWH9 247 aa13.87□□□□□ -0.19
CALD1-209ENST00000436461 CNIH2Q6PI25 160 aa13.87□□□□□ -0.19
CALD1-209ENST00000436461 FAM185AQ8N0U4 392 aa13.87□□□□□ -0.19
CALD1-209ENST00000436461 OR5D13Q8NGL4 314 aa13.87□□□□□ -0.19
CALD1-209ENST00000436461 CCDC107Q8WV48 283 aa13.87□□□□□ -0.19
CALD1-209ENST00000436461 MSI2Q96DH6 328 aaKnown RBP13.87□□□□□ -0.19
CALD1-209ENST00000436461 MMP27Q9H306 513 aa13.87□□□□□ -0.19
CALD1-209ENST00000436461 DIABLOQ9NR28 239 aa13.87□□□□□ -0.19
CALD1-209ENST00000436461 KIF25Q9UIL4 384 aa13.87□□□□□ -0.19
CALD1-209ENST00000436461 HSF4Q9ULV5 492 aa13.87□□□□□ -0.19
CALD1-209ENST00000436461 MRPS7Q9Y2R9 242 aaKnown RBP13.87□□□□□ -0.19
CALD1-209ENST00000436461 CREBBPQ92793 2442 aa13.87□□□□□ -0.19
CALD1-209ENST00000436461 LOC105371242A0A075B767 164 aa13.86□□□□□ -0.19
CALD1-209ENST00000436461 A8MXK9 166 aa13.86□□□□□ -0.19
CALD1-209ENST00000436461 P2RX3P56373 397 aa13.86□□□□□ -0.19
CALD1-209ENST00000436461 RBM39Q14498 530 aaKnown RBP13.86□□□□□ -0.19
CALD1-209ENST00000436461 ZNF273Q14593 569 aa13.86□□□□□ -0.19
CALD1-209ENST00000436461 FAM189A2Q15884 450 aa13.86□□□□□ -0.19
CALD1-209ENST00000436461 ZNF260Q3ZCT1 412 aa13.86□□□□□ -0.19
CALD1-209ENST00000436461 Q6ZPA2 131 aa13.86□□□□□ -0.19
CALD1-209ENST00000436461 TCF23Q7RTU1 214 aa13.86□□□□□ -0.19
CALD1-209ENST00000436461 C5orf24Q7Z6I8 188 aa13.86□□□□□ -0.19
CALD1-209ENST00000436461 OR4K15Q8NH41 348 aa13.86□□□□□ -0.19
CALD1-209ENST00000436461 POM121Q96HA1 1249 aa13.86□□□□□ -0.19
CALD1-209ENST00000436461 COX4I2Q96KJ9 171 aa13.86□□□□□ -0.19
CALD1-209ENST00000436461 CMTM3Q96MX0 182 aa13.86□□□□□ -0.19
CALD1-209ENST00000436461 RPUSD1Q9UJJ7 312 aaKnown RBP13.86□□□□□ -0.19
CALD1-209ENST00000436461 ACANP16112 2415 aa13.86□□□□□ -0.19
CALD1-209ENST00000436461 ABCA1O95477 2261 aa13.86□□□□□ -0.19
CALD1-209ENST00000436461 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.86□□□□□ -0.191e-5■■■■□ 21.5
CALD1-209ENST00000436461 MEIKINA0A087WXM9 373 aa13.86□□□□□ -0.19
CALD1-209ENST00000436461 XRCC3O43542 346 aa13.86□□□□□ -0.19
CALD1-209ENST00000436461 FOXH1O75593 365 aa13.86□□□□□ -0.19
CALD1-209ENST00000436461 TNFSF8P32971 234 aa13.86□□□□□ -0.19
CALD1-209ENST00000436461 TAS2R20P59543 309 aa13.86□□□□□ -0.19
CALD1-209ENST00000436461 RPL31P62899 125 aaKnown RBP13.86□□□□□ -0.19
CALD1-209ENST00000436461 NUDCD2Q8WVJ2 157 aa13.86□□□□□ -0.19
CALD1-209ENST00000436461 DIRAS2Q96HU8 199 aa13.86□□□□□ -0.19
CALD1-209ENST00000436461 A0A1W2PQ09 198 aa13.85□□□□□ -0.19
CALD1-209ENST00000436461 ODAMA1E959 279 aa13.85□□□□□ -0.19
CALD1-209ENST00000436461 CLPXO76031 633 aa13.85□□□□□ -0.19
CALD1-209ENST00000436461 MSMBP08118 114 aa13.85□□□□□ -0.19
CALD1-209ENST00000436461 CCL3L1P16619 93 aa13.85□□□□□ -0.19
CALD1-209ENST00000436461 ZNF16P17020 682 aaPredicted RBP13.85□□□□□ -0.19
CALD1-209ENST00000436461 ERVFRD-1P60508 538 aa13.85□□□□□ -0.19
CALD1-209ENST00000436461 TMEM200BQ69YZ2 307 aa13.85□□□□□ -0.19
CALD1-209ENST00000436461 SPNS3Q6ZMD2 512 aa13.85□□□□□ -0.19
CALD1-209ENST00000436461 ZNF497Q6ZNH5 498 aa13.85□□□□□ -0.19
CALD1-209ENST00000436461 SNX29P2Q8IUI4 249 aa13.85□□□□□ -0.19
CALD1-209ENST00000436461 LINC01356Q8N9X3 169 aa13.85□□□□□ -0.19
CALD1-209ENST00000436461 MRPL30Q8TCC3 161 aaKnown RBP13.85□□□□□ -0.19
CALD1-209ENST00000436461 SMR3AQ99954 134 aa13.85□□□□□ -0.19
CALD1-209ENST00000436461 A3GALT2U3KPV4 340 aa13.85□□□□□ -0.19
CALD1-209ENST00000436461 ANK3Q12955 4377 aaKnown RBP13.84□□□□□ -0.19
CALD1-209ENST00000436461 PPIAL4CA0A0B4J2A2 164 aa13.84□□□□□ -0.19
CALD1-209ENST00000436461 TMEM30CPA0ZSE6 113 aa13.84□□□□□ -0.19
CALD1-209ENST00000436461 B4DSR2 109 aa13.84□□□□□ -0.19
CALD1-209ENST00000436461 SCGNO76038 276 aa13.84□□□□□ -0.19
CALD1-209ENST00000436461 TGFAP01135 160 aa13.84□□□□□ -0.19
CALD1-209ENST00000436461 HLA-DQB1P01920 261 aa13.84□□□□□ -0.19
CALD1-209ENST00000436461 MT-ND4P03905 459 aa13.84□□□□□ -0.19
CALD1-209ENST00000436461 PPIAL4GP0DN37 164 aa13.84□□□□□ -0.19
CALD1-209ENST00000436461 GLP1RP43220 463 aa13.84□□□□□ -0.19
CALD1-209ENST00000436461 KCNJ3P48549 501 aa13.84□□□□□ -0.19
CALD1-209ENST00000436461 DLX1P56177 255 aa13.84□□□□□ -0.19
CALD1-209ENST00000436461 GUCA2AQ02747 115 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms