RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 CENPVL3A0A0U1RRI6 287 aa12.74□□□□□ -0.37
TREX1-201ENST00000433541 ODAMA1E959 279 aa12.74□□□□□ -0.37
TREX1-201ENST00000433541 IGHV1-69P01742 117 aa12.74□□□□□ -0.37
TREX1-201ENST00000433541 CSN2P05814 226 aa12.74□□□□□ -0.37
TREX1-201ENST00000433541 VSIG8P0DPA2 414 aa12.74□□□□□ -0.37
TREX1-201ENST00000433541 COX7A1P24310 79 aa12.74□□□□□ -0.37
TREX1-201ENST00000433541 ERP29P30040 261 aaKnown RBP12.74□□□□□ -0.37
TREX1-201ENST00000433541 FGF9P31371 208 aaPredicted RBP12.74□□□□□ -0.37
TREX1-201ENST00000433541 ERVFRD-1P60508 538 aa12.74□□□□□ -0.37
TREX1-201ENST00000433541 MXD1Q05195 221 aa12.74□□□□□ -0.37
TREX1-201ENST00000433541 RBM39Q14498 530 aaKnown RBP12.74□□□□□ -0.37
TREX1-201ENST00000433541 RAB12Q6IQ22 244 aa12.74□□□□□ -0.37
TREX1-201ENST00000433541 C1orf122Q6ZSJ8 110 aa12.74□□□□□ -0.37
TREX1-201ENST00000433541 PRIMA1Q86XR5 153 aa12.74□□□□□ -0.37
TREX1-201ENST00000433541 LYPD6Q86Y78 171 aa12.74□□□□□ -0.37
TREX1-201ENST00000433541 Q8N7P7 452 aa12.74□□□□□ -0.37
TREX1-201ENST00000433541 OR51D1Q8NGF3 324 aa12.74□□□□□ -0.37
TREX1-201ENST00000433541 ZDHHC16Q969W1 377 aa12.74□□□□□ -0.37
TREX1-201ENST00000433541 Q96M66 194 aa12.74□□□□□ -0.37
TREX1-201ENST00000433541 C1orf147Q96MC9 270 aaPredicted RBP12.74□□□□□ -0.37
TREX1-201ENST00000433541 NEDD4LQ96PU5 975 aa12.74□□□□□ -0.37
TREX1-201ENST00000433541 GFI1Q99684 422 aa12.74□□□□□ -0.37
TREX1-201ENST00000433541 URM1Q9BTM9 101 aaKnown RBP12.74□□□□□ -0.37
TREX1-201ENST00000433541 HEXA-AS1Q9H8Q6 139 aa12.74□□□□□ -0.37
TREX1-201ENST00000433541 OR6C3Q9NZP0 311 aa12.74□□□□□ -0.37
TREX1-201ENST00000433541 ZNF581Q9P0T4 197 aa12.74□□□□□ -0.37
TREX1-201ENST00000433541 STEAP1Q9UHE8 339 aa12.74□□□□□ -0.37
TREX1-201ENST00000433541 KIF25Q9UIL4 384 aa12.74□□□□□ -0.37
TREX1-201ENST00000433541 UBE2J1Q9Y385 318 aaPredicted RBP12.74□□□□□ -0.37
TREX1-201ENST00000433541 FAM96BQ9Y3D0 163 aa12.74□□□□□ -0.37
TREX1-201ENST00000433541 PEX16Q9Y5Y5 336 aa12.74□□□□□ -0.37
TREX1-201ENST00000433541 H3BUI4 141 aa12.73□□□□□ -0.37
TREX1-201ENST00000433541 AIREO43918 545 aa12.73□□□□□ -0.37
TREX1-201ENST00000433541 PRTN3P24158 256 aa12.73□□□□□ -0.37
TREX1-201ENST00000433541 KCNJ3P48549 501 aa12.73□□□□□ -0.37
TREX1-201ENST00000433541 BCL6BQ8N143 479 aaPredicted RBP12.73□□□□□ -0.37
TREX1-201ENST00000433541 FAM3DQ96BQ1 224 aa12.73□□□□□ -0.37
TREX1-201ENST00000433541 COQ2Q96H96 371 aa12.73□□□□□ -0.37
TREX1-201ENST00000433541 MRPS26Q9BYN8 205 aaKnown RBP12.73□□□□□ -0.37
TREX1-201ENST00000433541 IFT22Q9H7X7 185 aa12.73□□□□□ -0.37
TREX1-201ENST00000433541 ANK3Q12955 4377 aaKnown RBP12.73□□□□□ -0.37
TREX1-201ENST00000433541 SHISA3A0PJX4 238 aa12.72□□□□□ -0.37
TREX1-201ENST00000433541 TMEM30CPA0ZSE6 113 aa12.72□□□□□ -0.37
TREX1-201ENST00000433541 UBE2QL1A1L167 161 aa12.72□□□□□ -0.37
TREX1-201ENST00000433541 FAM90A10PA6NDY2 464 aa12.72□□□□□ -0.37
TREX1-201ENST00000433541 FAM90A18PA6NE21 464 aa12.72□□□□□ -0.37
TREX1-201ENST00000433541 FAM90A16PA6NEW6 464 aa12.72□□□□□ -0.37
TREX1-201ENST00000433541 FAM90A20PA6NIJ5 464 aa12.72□□□□□ -0.37
TREX1-201ENST00000433541 FAM90A8PA6NJQ4 464 aa12.72□□□□□ -0.37
TREX1-201ENST00000433541 FAM90A7PA6NKC0 464 aa12.72□□□□□ -0.37
TREX1-201ENST00000433541 IFITM5A6NNB3 132 aa12.72□□□□□ -0.37
TREX1-201ENST00000433541 FAM90A22PA8MWA6 464 aa12.72□□□□□ -0.37
TREX1-201ENST00000433541 FAM90A12PA8MX19 464 aa12.72□□□□□ -0.37
TREX1-201ENST00000433541 FAM90A5PA8MXJ8 464 aa12.72□□□□□ -0.37
TREX1-201ENST00000433541 FAM90A23PA8MXZ1 464 aa12.72□□□□□ -0.37
TREX1-201ENST00000433541 RNASEK-C17orf49H0YIS7 233 aa12.72□□□□□ -0.37
TREX1-201ENST00000433541 AIPO00170 330 aa12.72□□□□□ -0.37
TREX1-201ENST00000433541 CLPXO76031 633 aa12.72□□□□□ -0.37
TREX1-201ENST00000433541 PAHP00439 452 aa12.72□□□□□ -0.37
TREX1-201ENST00000433541 FAM90A15PP0C7V4 464 aa12.72□□□□□ -0.37
TREX1-201ENST00000433541 FAM90A13PP0C7W8 464 aa12.72□□□□□ -0.37
TREX1-201ENST00000433541 FAM90A14PP0C7W9 464 aa12.72□□□□□ -0.37
TREX1-201ENST00000433541 FAM90A24PP0C7X0 464 aa12.72□□□□□ -0.37
TREX1-201ENST00000433541 FUT3P21217 361 aa12.72□□□□□ -0.37
TREX1-201ENST00000433541 SDC2P34741 201 aa12.72□□□□□ -0.37
TREX1-201ENST00000433541 LGALS4P56470 323 aa12.72□□□□□ -0.37
TREX1-201ENST00000433541 BPIFB3P59826 476 aa12.72□□□□□ -0.37
TREX1-201ENST00000433541 LSM3P62310 102 aaKnown RBP12.72□□□□□ -0.37
TREX1-201ENST00000433541 RPS27AP62979 156 aaKnown RBP12.72□□□□□ -0.37
TREX1-201ENST00000433541 DYNC1I2Q13409 638 aaKnown RBP12.72□□□□□ -0.37
TREX1-201ENST00000433541 OR2W3Q7Z3T1 314 aa12.72□□□□□ -0.37
TREX1-201ENST00000433541 TPRA1Q86W33 373 aa12.72□□□□□ -0.37
TREX1-201ENST00000433541 SIGLECL1Q8N7X8 197 aa12.72□□□□□ -0.37
TREX1-201ENST00000433541 ZNF565Q8N9K5 539 aa12.72□□□□□ -0.37
TREX1-201ENST00000433541 PLPPR1Q8TBJ4 325 aa12.72□□□□□ -0.37
TREX1-201ENST00000433541 JMJD8Q96S16 334 aa12.72□□□□□ -0.37
TREX1-201ENST00000433541 CENPOQ9BU64 300 aa12.72□□□□□ -0.37
TREX1-201ENST00000433541 RNF167Q9H6Y7 350 aa12.72□□□□□ -0.37
TREX1-201ENST00000433541 ETAA1Q9NY74 926 aa12.72□□□□□ -0.37
TREX1-201ENST00000433541 SVEP1Q4LDE5 3571 aa12.72□□□□□ -0.37
TREX1-201ENST00000433541 MEIOCA2RUB1 952 aa12.71□□□□□ -0.37
TREX1-201ENST00000433541 NPFFO15130 113 aa12.71□□□□□ -0.37
TREX1-201ENST00000433541 PDCD6O75340 191 aa12.71□□□□□ -0.37
TREX1-201ENST00000433541 IGHV1-8P0DP01 117 aa12.71□□□□□ -0.37
TREX1-201ENST00000433541 JUNBP17275 347 aaPredicted RBP12.71□□□□□ -0.37
TREX1-201ENST00000433541 NFYBP25208 207 aa12.71□□□□□ -0.37
TREX1-201ENST00000433541 BLVRBP30043 206 aaPredicted RBP12.71□□□□□ -0.37
TREX1-201ENST00000433541 SRSF2Q01130 221 aaKnown RBP12.71□□□□□ -0.37
TREX1-201ENST00000433541 UNC119Q13432 240 aa12.71□□□□□ -0.37
TREX1-201ENST00000433541 C2orf76Q3KRA6 126 aa12.71□□□□□ -0.37
TREX1-201ENST00000433541 PRAMEF5Q5TYX0 476 aa12.71□□□□□ -0.37
TREX1-201ENST00000433541 PNKDQ8N490 385 aa12.71□□□□□ -0.37
TREX1-201ENST00000433541 OR13D1Q8NGV5 346 aa12.71□□□□□ -0.37
TREX1-201ENST00000433541 MRGPRDQ8TDS7 321 aa12.71□□□□□ -0.37
TREX1-201ENST00000433541 CCDC107Q8WV48 283 aa12.71□□□□□ -0.37
TREX1-201ENST00000433541 SLC25A28Q96A46 364 aa12.71□□□□□ -0.37
TREX1-201ENST00000433541 NICN1Q9BSH3 213 aa12.71□□□□□ -0.37
TREX1-201ENST00000433541 LIN7BQ9HAP6 207 aa12.71□□□□□ -0.37
TREX1-201ENST00000433541 CHMP1AQ9HD42 196 aaPredicted RBP12.71□□□□□ -0.37
TREX1-201ENST00000433541 PLEKHJ1Q9NW61 149 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms