RNA–Protein interactions for RNA: ENST00000428494.6

GHDC-203, Transcript of GH3 domain containing, humanhuman

TSL 5 BASIC

Gene GHDC, Length 2,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-203ENST00000428494 OR6C6A6NF89 314 aa13.55□□□□□ -0.24
GHDC-203ENST00000428494 IFITM10A6NMD0 228 aa13.55□□□□□ -0.24
GHDC-203ENST00000428494 IFNA17P01571 189 aa13.55□□□□□ -0.24
GHDC-203ENST00000428494 CXCL1P09341 107 aa13.55□□□□□ -0.24
GHDC-203ENST00000428494 TAGLN2P37802 199 aaKnown RBP13.55□□□□□ -0.24
GHDC-203ENST00000428494 FUT6P51993 359 aa13.55□□□□□ -0.24
GHDC-203ENST00000428494 RAC1P63000 192 aa13.55□□□□□ -0.24
GHDC-203ENST00000428494 CDPF1Q6NVV7 123 aa13.55□□□□□ -0.24
GHDC-203ENST00000428494 SLC23A3Q6PIS1 610 aa13.55□□□□□ -0.24
GHDC-203ENST00000428494 P4HA3Q7Z4N8 544 aa13.55□□□□□ -0.24
GHDC-203ENST00000428494 SELENOHQ8IZQ5 122 aaKnown RBP13.55□□□□□ -0.24
GHDC-203ENST00000428494 GAPTQ8N292 157 aa13.55□□□□□ -0.24
GHDC-203ENST00000428494 TCEAL7Q9BRU2 100 aa13.55□□□□□ -0.24
GHDC-203ENST00000428494 WNT5BQ9H1J7 359 aa13.55□□□□□ -0.24
GHDC-203ENST00000428494 IL36RNQ9UBH0 155 aa13.55□□□□□ -0.24
GHDC-203ENST00000428494 IGKV1D-13A0A0B4J2D9 117 aa13.54□□□□□ -0.24
GHDC-203ENST00000428494 hCG_38984A0A1B0GV85 526 aa13.54□□□□□ -0.24
GHDC-203ENST00000428494 C3orf80F5H4A9 247 aa13.54□□□□□ -0.24
GHDC-203ENST00000428494 HSD17B6O14756 317 aa13.54□□□□□ -0.24
GHDC-203ENST00000428494 TNFSF12O43508 249 aa13.54□□□□□ -0.24
GHDC-203ENST00000428494 CST2P09228 141 aa13.54□□□□□ -0.24
GHDC-203ENST00000428494 IGKV1-13P0DP09 117 aa13.54□□□□□ -0.24
GHDC-203ENST00000428494 STARD6P59095 220 aa13.54□□□□□ -0.24
GHDC-203ENST00000428494 HIKESHIQ53FT3 197 aa13.54□□□□□ -0.24
GHDC-203ENST00000428494 CYB561D1Q8N8Q1 229 aa13.54□□□□□ -0.24
GHDC-203ENST00000428494 CCDC54Q8NEL0 328 aa13.54□□□□□ -0.24
GHDC-203ENST00000428494 LFNGQ8NES3 379 aa13.54□□□□□ -0.24
GHDC-203ENST00000428494 GGACTQ9BVM4 153 aa13.54□□□□□ -0.24
GHDC-203ENST00000428494 KLK3P07288 261 aaPredicted RBP13.54□□□□□ -0.24
GHDC-203ENST00000428494 EDN3P14138 238 aa13.54□□□□□ -0.24
GHDC-203ENST00000428494 RAB1AP62820 205 aa13.54□□□□□ -0.24
GHDC-203ENST00000428494 ZNF266Q14584 549 aa13.54□□□□□ -0.24
GHDC-203ENST00000428494 CEACAM16Q2WEN9 425 aa13.54□□□□□ -0.24
GHDC-203ENST00000428494 TMEM211Q6ICI0 200 aa13.54□□□□□ -0.24
GHDC-203ENST00000428494 DPPA2Q7Z7J5 298 aa13.54□□□□□ -0.24
GHDC-203ENST00000428494 ZNF100Q8IYN0 542 aa13.54□□□□□ -0.24
GHDC-203ENST00000428494 Q8WTZ3 238 aa13.54□□□□□ -0.24
GHDC-203ENST00000428494 IMMP1LQ96LU5 166 aa13.54□□□□□ -0.24
GHDC-203ENST00000428494 TMEM68Q96MH6 324 aa13.54□□□□□ -0.24
GHDC-203ENST00000428494 CRIM1Q9NZV1 1036 aa13.54□□□□□ -0.24
GHDC-203ENST00000428494 CXCL13O43927 109 aa13.53□□□□□ -0.24
GHDC-203ENST00000428494 CDS2O95674 445 aa13.53□□□□□ -0.24
GHDC-203ENST00000428494 SRP19P09132 144 aaKnown RBP13.53□□□□□ -0.24
GHDC-203ENST00000428494 COX6A1P12074 109 aa13.53□□□□□ -0.24
GHDC-203ENST00000428494 SSR4P51571 173 aa13.53□□□□□ -0.24
GHDC-203ENST00000428494 NDUFA6P56556 154 aa13.53□□□□□ -0.24
GHDC-203ENST00000428494 CARD18P57730 90 aa13.53□□□□□ -0.24
GHDC-203ENST00000428494 DLK1P80370 383 aa13.53□□□□□ -0.24
GHDC-203ENST00000428494 ZNF154Q13106 437 aa13.53□□□□□ -0.24
GHDC-203ENST00000428494 EXTL1Q92935 676 aa13.53□□□□□ -0.24
GHDC-203ENST00000428494 OR2H1Q9GZK4 316 aa13.53□□□□□ -0.24
GHDC-203ENST00000428494 TMPRSS5Q9H3S3 457 aa13.53□□□□□ -0.24
GHDC-203ENST00000428494 PLEKHF2Q9H8W4 249 aa13.53□□□□□ -0.24
GHDC-203ENST00000428494 LYRM2Q9NU23 88 aaPredicted RBP13.53□□□□□ -0.24
GHDC-203ENST00000428494 DIDO1Q9BTC0 2240 aaKnown RBP13.53□□□□□ -0.24
GHDC-203ENST00000428494 A0A1B0GW64 132 aa13.53□□□□□ -0.24
GHDC-203ENST00000428494 PITX3O75364 302 aa13.53□□□□□ -0.24
GHDC-203ENST00000428494 JMJD7P0C870 316 aa13.53□□□□□ -0.24
GHDC-203ENST00000428494 ERVFRD-1P60508 538 aa13.53□□□□□ -0.24
GHDC-203ENST00000428494 UBE2KP61086 200 aa13.53□□□□□ -0.24
GHDC-203ENST00000428494 AAED1Q7RTV5 226 aa13.53□□□□□ -0.24
GHDC-203ENST00000428494 ZNF429Q86V71 674 aa13.53□□□□□ -0.24
GHDC-203ENST00000428494 FOXB1Q99853 325 aa13.53□□□□□ -0.24
GHDC-203ENST00000428494 NBEAQ8NFP9 2946 aa13.52□□□□□ -0.24
GHDC-203ENST00000428494 COL6A3P12111 3177 aa13.52□□□□□ -0.24
GHDC-203ENST00000428494 TGIF2-C20orf24A0A0A6YYL0 155 aa13.52□□□□□ -0.24
GHDC-203ENST00000428494 H3BP45 60 aa13.52□□□□□ -0.24
GHDC-203ENST00000428494 CHST1O43916 411 aa13.52□□□□□ -0.24
GHDC-203ENST00000428494 RFPL3SP0C7P2 107 aa13.52□□□□□ -0.24
GHDC-203ENST00000428494 CCL2P13500 99 aa13.52□□□□□ -0.24
GHDC-203ENST00000428494 BCL3P20749 454 aa13.52□□□□□ -0.24
GHDC-203ENST00000428494 CCNOP22674 350 aa13.52□□□□□ -0.24
GHDC-203ENST00000428494 MAS1LP35410 378 aa13.52□□□□□ -0.24
GHDC-203ENST00000428494 VAMP2P63027 116 aa13.52□□□□□ -0.24
GHDC-203ENST00000428494 ICAM4Q14773 271 aa13.52□□□□□ -0.24
GHDC-203ENST00000428494 ELOBQ15370 118 aa13.52□□□□□ -0.24
GHDC-203ENST00000428494 ANKRD39Q53RE8 183 aa13.52□□□□□ -0.24
GHDC-203ENST00000428494 SIGLEC12Q96PQ1 595 aa13.52□□□□□ -0.24
GHDC-203ENST00000428494 TOLLIPQ9H0E2 274 aa13.52□□□□□ -0.24
GHDC-203ENST00000428494 CCL28Q9NRJ3 127 aa13.52□□□□□ -0.24
GHDC-203ENST00000428494 PARPBPQ9NWS1 579 aa13.52□□□□□ -0.24
GHDC-203ENST00000428494 HS3ST3B1Q9Y662 390 aa13.52□□□□□ -0.24
GHDC-203ENST00000428494 URB1O60287 2271 aaKnown RBP13.52□□□□□ -0.24
GHDC-203ENST00000428494 ZNF716A6NP11 495 aa13.52□□□□□ -0.25
GHDC-203ENST00000428494 KLF7O75840 302 aaPredicted RBP13.52□□□□□ -0.25
GHDC-203ENST00000428494 B3GALT5-AS1P59052 145 aa13.52□□□□□ -0.25
GHDC-203ENST00000428494 RAC3P60763 192 aa13.52□□□□□ -0.25
GHDC-203ENST00000428494 HERPUD1Q15011 391 aa13.52□□□□□ -0.25
GHDC-203ENST00000428494 EXT1Q16394 746 aa13.52□□□□□ -0.25
GHDC-203ENST00000428494 IZUMO4Q1ZYL8 232 aa13.52□□□□□ -0.25
GHDC-203ENST00000428494 ZNF674Q2M3X9 581 aa13.52□□□□□ -0.25
GHDC-203ENST00000428494 RPS19BP1Q86WX3 136 aaKnown RBP13.52□□□□□ -0.25
GHDC-203ENST00000428494 C1QL4Q86Z23 238 aa13.52□□□□□ -0.25
GHDC-203ENST00000428494 CPEB3Q8NE35 698 aaKnown RBP13.52□□□□□ -0.25
GHDC-203ENST00000428494 TMEM56Q96MV1 263 aa13.52□□□□□ -0.25
GHDC-203ENST00000428494 PHF7Q9BWX1 381 aaPredicted RBP13.52□□□□□ -0.25
GHDC-203ENST00000428494 TMEM56-RWDD3S4R434 201 aa13.52□□□□□ -0.25
GHDC-203ENST00000428494 CBR3O75828 277 aa13.51□□□□□ -0.25
GHDC-203ENST00000428494 HOXA5P20719 270 aa13.51□□□□□ -0.25
GHDC-203ENST00000428494 HOXA6P31267 233 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms