RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 FAM27D1Q5T7N8 215 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 TMEM215Q68D42 235 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 UNQ5815/PRO19632Q6UWF5 114 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 STXBP6Q8NFX7 210 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 OR4C16Q8NGL9 310 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 OR4Q3Q8NH05 313 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 PRR14Q9BWN1 585 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 SPNS1Q9H2V7 528 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 CMC2Q9NRP2 79 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 CXorf51AA0A1B0GTR3 108 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 A0A1W2PRX2 142 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 IGSF23A1L1A6 192 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 LIPT2A6NK58 231 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 TRIM77I1YAP6 450 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 CYB5R3P00387 301 aaPredicted RBP5.06□□□□□ -1.6
HERC4-206ENST00000427635 CLDN18P56856 261 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 STARD6P59095 220 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 LSAMPQ13449 338 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 C5orf47Q569G3 176 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 C1QL3Q5VWW1 255 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 SCGB1D4Q6XE38 83 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 PAQR9Q6ZVX9 377 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 ZNF683Q8IZ20 524 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 ST6GALNAC6Q969X2 333 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 FAM210BQ96KR6 192 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 SIGLEC11Q96RL6 698 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 WDR54Q9H977 334 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 RANGRFQ9HD47 186 aaPredicted RBP5.06□□□□□ -1.6
HERC4-206ENST00000427635 ZBTB42B2RXF5 422 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 PRKNO60260 465 aaPredicted RBP5.06□□□□□ -1.6
HERC4-206ENST00000427635 PPP1R17O96001 155 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 CACNG7P62955 275 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 AESQ08117 197 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 SIAH3Q8IW03 269 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 KLHDC1Q8N7A1 406 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 EEF1AKMT3Q96AZ1 226 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 HARBI1Q96MB7 349 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 SMIM7Q9BQ49 75 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 TMEM167BQ9NRX6 74 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 HIGD1AQ9Y241 93 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 IGKV3D-11A0A0A0MRZ8 115 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 TMEM235A6NFC5 223 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 PRR33A8MZF0 331 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 BMPR1BO00238 502 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 CHST1O43916 411 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 ZNF324O75467 553 aaPredicted RBP5.06□□□□□ -1.6
HERC4-206ENST00000427635 CDK2AP2O75956 126 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 IGKV3-11P04433 115 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 PRSS1P07477 247 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 SCGB1A1P11684 91 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 GZMHP20718 246 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 GAB4Q2WGN9 574 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 TMEM78Q5T7P6 136 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 SLC26A10Q8NG04 563 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 ZNF707Q96C28 371 aaPredicted RBP5.06□□□□□ -1.6
HERC4-206ENST00000427635 R3HDM4Q96D70 268 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 ADGRL4Q9HBW9 690 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 BOLA1Q9Y3E2 137 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 CEP290O15078 2479 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 TRDV1A0A1B0GX56 115 aa5.05□□□□□ -1.6
HERC4-206ENST00000427635 S1PR2O95136 353 aa5.05□□□□□ -1.6
HERC4-206ENST00000427635 ZNF688P0C7X2 276 aa5.05□□□□□ -1.6
HERC4-206ENST00000427635 DAPP51397 102 aa5.05□□□□□ -1.6
HERC4-206ENST00000427635 ZNF137PP52743 207 aa5.05□□□□□ -1.6
HERC4-206ENST00000427635 PCOLCEQ15113 449 aa5.05□□□□□ -1.6
HERC4-206ENST00000427635 C3orf36Q3SXR2 165 aa5.05□□□□□ -1.6
HERC4-206ENST00000427635 C10orf113Q5VZT2 155 aa5.05□□□□□ -1.6
HERC4-206ENST00000427635 DTX2Q86UW9 622 aa5.05□□□□□ -1.6
HERC4-206ENST00000427635 OR4B1Q8NGF8 309 aa5.05□□□□□ -1.6
HERC4-206ENST00000427635 NUBPLQ8TB37 319 aa5.05□□□□□ -1.6
HERC4-206ENST00000427635 C2orf50Q96LR7 162 aa5.05□□□□□ -1.6
HERC4-206ENST00000427635 KCNK15Q9H427 330 aa5.05□□□□□ -1.6
HERC4-206ENST00000427635 NAA60Q9H7X0 242 aa5.05□□□□□ -1.6
HERC4-206ENST00000427635 DDX60Q8IY21 1712 aaKnown RBP5.05□□□□□ -1.6
HERC4-206ENST00000427635 RFPL4AA6NLU0 287 aa5.05□□□□□ -1.6
HERC4-206ENST00000427635 RFPL4AL1F8VTS6 287 aa5.05□□□□□ -1.6
HERC4-206ENST00000427635 HRH1P35367 487 aa5.05□□□□□ -1.6
HERC4-206ENST00000427635 G6PCP35575 357 aa5.05□□□□□ -1.6
HERC4-206ENST00000427635 TGFBR1P36897 503 aa5.05□□□□□ -1.6
HERC4-206ENST00000427635 ZNF117Q03924 483 aa5.05□□□□□ -1.6
HERC4-206ENST00000427635 ATP6V1FQ16864 119 aa5.05□□□□□ -1.6
HERC4-206ENST00000427635 KHDC3LQ587J8 217 aa5.05□□□□□ -1.6
HERC4-206ENST00000427635 TECRQ9NZ01 308 aaKnown RBP5.05□□□□□ -1.6
HERC4-206ENST00000427635 CLEC2DQ9UHP7 191 aa5.05□□□□□ -1.6
HERC4-206ENST00000427635 MYH9P35579 1960 aaKnown RBP5.05□□□□□ -1.6
HERC4-206ENST00000427635 C7orf72A4D263 438 aa5.05□□□□□ -1.6
HERC4-206ENST00000427635 IGHV3-13P01766 116 aa5.05□□□□□ -1.6
HERC4-206ENST00000427635 IGHV3-7P01780 117 aa5.05□□□□□ -1.6
HERC4-206ENST00000427635 CST2P09228 141 aa5.05□□□□□ -1.6
HERC4-206ENST00000427635 CEACAM1P13688 526 aa5.05□□□□□ -1.6
HERC4-206ENST00000427635 RPL12P30050 165 aaKnown RBP5.05□□□□□ -1.6
HERC4-206ENST00000427635 S100A11P31949 105 aa5.05□□□□□ -1.6
HERC4-206ENST00000427635 CDX1P47902 265 aaPredicted RBP5.05□□□□□ -1.6
HERC4-206ENST00000427635 SLC38A11Q08AI6 406 aa5.05□□□□□ -1.6
HERC4-206ENST00000427635 GABRA6Q16445 453 aa5.05□□□□□ -1.6
HERC4-206ENST00000427635 NSUN5P1Q3KNT7 163 aa5.05□□□□□ -1.6
HERC4-206ENST00000427635 SPINK9Q5DT21 86 aa5.05□□□□□ -1.6
HERC4-206ENST00000427635 LINC00596Q86U02 117 aa5.05□□□□□ -1.6
HERC4-206ENST00000427635 C3orf56Q8N813 242 aa5.05□□□□□ -1.6
HERC4-206ENST00000427635 OR4A5Q8NH83 315 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms