RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 hADV38S2A0JD32 116 aa12.27□□□□□ -0.45
USB1-202ENST00000423271 MAGEA13PA6NCF6 341 aa12.27□□□□□ -0.45
USB1-202ENST00000423271 GPX5O75715 221 aa12.27□□□□□ -0.45
USB1-202ENST00000423271 JUNBP17275 347 aaPredicted RBP12.27□□□□□ -0.45
USB1-202ENST00000423271 FSTP19883 344 aa12.27□□□□□ -0.45
USB1-202ENST00000423271 MAPK3P27361 379 aaPredicted RBP12.27□□□□□ -0.45
USB1-202ENST00000423271 BDKRB2P30411 391 aa12.27□□□□□ -0.45
USB1-202ENST00000423271 EFNB2P52799 333 aa12.27□□□□□ -0.45
USB1-202ENST00000423271 ZP1P60852 638 aa12.27□□□□□ -0.45
USB1-202ENST00000423271 SSX1Q16384 188 aa12.27□□□□□ -0.45
USB1-202ENST00000423271 SPIN3Q5JUX0 258 aa12.27□□□□□ -0.45
USB1-202ENST00000423271 FAM27D1Q5T7N8 215 aa12.27□□□□□ -0.45
USB1-202ENST00000423271 UBE2UQ5VVX9 321 aa12.27□□□□□ -0.45
USB1-202ENST00000423271 UNQ9370/PRO34162Q6UXP9 181 aa12.27□□□□□ -0.45
USB1-202ENST00000423271 SATL1Q86VE3 508 aa12.27□□□□□ -0.45
USB1-202ENST00000423271 OR11H6Q8NGC7 330 aa12.27□□□□□ -0.45
USB1-202ENST00000423271 OR4C13Q8NGP0 309 aa12.27□□□□□ -0.45
USB1-202ENST00000423271 GSTK1Q9Y2Q3 226 aa12.27□□□□□ -0.45
USB1-202ENST00000423271 TBL2Q9Y4P3 447 aaKnown RBP12.27□□□□□ -0.45
USB1-202ENST00000423271 LINC00312Q9Y6C7 94 aa12.27□□□□□ -0.45
USB1-202ENST00000423271 VGLL3A8MV65 326 aa12.26□□□□□ -0.45
USB1-202ENST00000423271 GABRPO00591 440 aa12.26□□□□□ -0.45
USB1-202ENST00000423271 MGST3O14880 152 aa12.26□□□□□ -0.45
USB1-202ENST00000423271 MAGEB3O15480 346 aa12.26□□□□□ -0.45
USB1-202ENST00000423271 SC5DO75845 299 aa12.26□□□□□ -0.45
USB1-202ENST00000423271 MMP23AO75900 390 aa12.26□□□□□ -0.45
USB1-202ENST00000423271 KDM4BO94953 1096 aa12.26□□□□□ -0.45
USB1-202ENST00000423271 OR2H2O95918 312 aa12.26□□□□□ -0.45
USB1-202ENST00000423271 ALDOBP05062 364 aa12.26□□□□□ -0.45
USB1-202ENST00000423271 TMEM225BP0DP42 221 aa12.26□□□□□ -0.45
USB1-202ENST00000423271 KIR2DS4P43632 304 aa12.26□□□□□ -0.45
USB1-202ENST00000423271 P2RX3P56373 397 aa12.26□□□□□ -0.45
USB1-202ENST00000423271 DYNC1I2Q13409 638 aaKnown RBP12.26□□□□□ -0.45
USB1-202ENST00000423271 FAM189A2Q15884 450 aa12.26□□□□□ -0.45
USB1-202ENST00000423271 SSX2Q16385 188 aa12.26□□□□□ -0.45
USB1-202ENST00000423271 DDI2Q5TDH0 399 aa12.26□□□□□ -0.45
USB1-202ENST00000423271 CCBE1Q6UXH8 406 aaPredicted RBP12.26□□□□□ -0.45
USB1-202ENST00000423271 TMEM91Q6ZNR0 172 aa12.26□□□□□ -0.45
USB1-202ENST00000423271 THRSPQ92748 146 aa12.26□□□□□ -0.45
USB1-202ENST00000423271 FOXRED1Q96CU9 486 aaPredicted RBP12.26□□□□□ -0.45
USB1-202ENST00000423271 GPER1Q99527 375 aa12.26□□□□□ -0.45
USB1-202ENST00000423271 RANBP3Q9H6Z4 567 aaPredicted RBP12.26□□□□□ -0.45
USB1-202ENST00000423271 RAB18Q9NP72 206 aa12.26□□□□□ -0.45
USB1-202ENST00000423271 EXOSC4Q9NPD3 245 aaKnown RBP12.26□□□□□ -0.45
USB1-202ENST00000423271 TMEM138Q9NPI0 162 aa12.26□□□□□ -0.45
USB1-202ENST00000423271 CKLFQ9UBR5 152 aa12.26□□□□□ -0.45
USB1-202ENST00000423271 FOXJ3Q9UPW0 622 aa12.26□□□□□ -0.45
USB1-202ENST00000423271 TCF19Q9Y242 345 aa12.26□□□□□ -0.45
USB1-202ENST00000423271 SESN1Q9Y6P5 492 aa12.26□□□□□ -0.45
USB1-202ENST00000423271 IGHV2-26A0A0B4J1V2 119 aa12.25□□□□□ -0.45
USB1-202ENST00000423271 MAS1P04201 325 aa12.25□□□□□ -0.45
USB1-202ENST00000423271 PSMB9P28065 219 aa12.25□□□□□ -0.45
USB1-202ENST00000423271 GP2P55259 537 aaKnown RBP12.25□□□□□ -0.45
USB1-202ENST00000423271 BAIAP2L2Q6UXY1 529 aa12.25□□□□□ -0.45
USB1-202ENST00000423271 LIAT1Q6ZQX7 453 aa12.25□□□□□ -0.45
USB1-202ENST00000423271 CEACAM19Q7Z692 300 aa12.25□□□□□ -0.45
USB1-202ENST00000423271 TMEM219Q86XT9 240 aa12.25□□□□□ -0.45
USB1-202ENST00000423271 KLHDC1Q8N7A1 406 aa12.25□□□□□ -0.45
USB1-202ENST00000423271 C11orf44Q8N8P7 122 aa12.25□□□□□ -0.45
USB1-202ENST00000423271 FAM110DQ8TAY7 271 aaPredicted RBP12.25□□□□□ -0.45
USB1-202ENST00000423271 TNFAIP8L1Q8WVP5 186 aa12.25□□□□□ -0.45
USB1-202ENST00000423271 MALSU1Q96EH3 234 aa12.25□□□□□ -0.45
USB1-202ENST00000423271 NPFFR1Q9GZQ6 430 aa12.25□□□□□ -0.45
USB1-202ENST00000423271 PPIL3Q9H2H8 161 aaKnown RBP12.25□□□□□ -0.45
USB1-202ENST00000423271 GLS2Q9UI32 602 aa12.25□□□□□ -0.45
USB1-202ENST00000423271 A6NDX4 124 aa12.24□□□□□ -0.45
USB1-202ENST00000423271 SH2D1BO14796 132 aa12.24□□□□□ -0.45
USB1-202ENST00000423271 TNFAIP8O95379 198 aa12.24□□□□□ -0.45
USB1-202ENST00000423271 ERP29P30040 261 aaKnown RBP12.24□□□□□ -0.45
USB1-202ENST00000423271 ZNF93P35789 620 aaPredicted RBP12.24□□□□□ -0.45
USB1-202ENST00000423271 OR3A4PP47883 348 aa12.24□□□□□ -0.45
USB1-202ENST00000423271 HABP2Q14520 560 aaPredicted RBP12.24□□□□□ -0.45
USB1-202ENST00000423271 HERPUD1Q15011 391 aa12.24□□□□□ -0.45
USB1-202ENST00000423271 TRAM1Q15629 374 aa12.24□□□□□ -0.45
USB1-202ENST00000423271 PRAMEF5Q5TYX0 476 aa12.24□□□□□ -0.45
USB1-202ENST00000423271 Q6P435 159 aa12.24□□□□□ -0.45
USB1-202ENST00000423271 TRAPPC6BQ86SZ2 158 aa12.24□□□□□ -0.45
USB1-202ENST00000423271 SAXO1Q8IYX7 474 aa12.24□□□□□ -0.45
USB1-202ENST00000423271 OR2T6Q8NHC8 308 aa12.24□□□□□ -0.45
USB1-202ENST00000423271 FCGR1BQ92637 280 aa12.24□□□□□ -0.45
USB1-202ENST00000423271 CPNE2Q96FN4 548 aaPredicted RBP12.24□□□□□ -0.45
USB1-202ENST00000423271 FAM192AQ9GZU8 254 aa12.24□□□□□ -0.45
USB1-202ENST00000423271 TMEM133Q9H2Q1 129 aa12.24□□□□□ -0.45
USB1-202ENST00000423271 ZNF702PQ9H963 129 aa12.24□□□□□ -0.45
USB1-202ENST00000423271 ABCB10Q9NRK6 738 aa12.24□□□□□ -0.45
USB1-202ENST00000423271 HILPDAQ9Y5L2 63 aa12.24□□□□□ -0.45
USB1-202ENST00000423271 TGP01266 2768 aa12.23□□□□□ -0.45
USB1-202ENST00000423271 FAM172BPA6NC97 362 aa12.23□□□□□ -0.45
USB1-202ENST00000423271 UCHL1P09936 223 aa12.23□□□□□ -0.45
USB1-202ENST00000423271 ZNF44P15621 663 aa12.23□□□□□ -0.45
USB1-202ENST00000423271 PSMA1P25786 263 aaKnown RBP12.23□□□□□ -0.45
USB1-202ENST00000423271 LMO1P25800 156 aa12.23□□□□□ -0.45
USB1-202ENST00000423271 GDNFP39905 211 aa12.23□□□□□ -0.45
USB1-202ENST00000423271 GLIPR1P48060 266 aa12.23□□□□□ -0.45
USB1-202ENST00000423271 FABP5Q01469 135 aa12.23□□□□□ -0.45
USB1-202ENST00000423271 SCN1BQ07699 218 aa12.23□□□□□ -0.45
USB1-202ENST00000423271 AESQ08117 197 aa12.23□□□□□ -0.45
USB1-202ENST00000423271 C2orf68Q2NKX9 166 aa12.23□□□□□ -0.45
USB1-202ENST00000423271 PDLIM3Q53GG5 364 aaPredicted RBP12.23□□□□□ -0.45
USB1-202ENST00000423271 HSD17B12Q53GQ0 312 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms