RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 FAM189A2Q15884 450 aa14.04□□□□□ -0.16
COL7A1-202ENST00000422991 BPIFB2Q8N4F0 458 aa14.04□□□□□ -0.16
COL7A1-202ENST00000422991 LY6G5BQ8NDX9 201 aa14.04□□□□□ -0.16
COL7A1-202ENST00000422991 OR56B1Q8NGI3 324 aa14.04□□□□□ -0.16
COL7A1-202ENST00000422991 RAB40AQ8WXH6 277 aa14.04□□□□□ -0.16
COL7A1-202ENST00000422991 CYYR1Q96J86 154 aa14.04□□□□□ -0.16
COL7A1-202ENST00000422991 NUDT16L1Q9BRJ7 211 aaKnown RBP14.04□□□□□ -0.16
COL7A1-202ENST00000422991 MMP26Q9NRE1 261 aa14.04□□□□□ -0.16
COL7A1-202ENST00000422991 C19orf12Q9NSK7 152 aa14.04□□□□□ -0.16
COL7A1-202ENST00000422991 HIF1ANQ9NWT6 349 aa14.04□□□□□ -0.16
COL7A1-202ENST00000422991 RHBDL2Q9NX52 303 aa14.04□□□□□ -0.16
COL7A1-202ENST00000422991 PEX16Q9Y5Y5 336 aa14.04□□□□□ -0.16
COL7A1-202ENST00000422991 SOCS1O15524 211 aa14.03□□□□□ -0.16
COL7A1-202ENST00000422991 GLAP06280 429 aa14.03□□□□□ -0.16
COL7A1-202ENST00000422991 ZNF182P17025 639 aaPredicted RBP14.03□□□□□ -0.16
COL7A1-202ENST00000422991 ERP29P30040 261 aaKnown RBP14.03□□□□□ -0.16
COL7A1-202ENST00000422991 BLVRBP30043 206 aaPredicted RBP14.03□□□□□ -0.16
COL7A1-202ENST00000422991 EDDM3BP56851 147 aa14.03□□□□□ -0.16
COL7A1-202ENST00000422991 RPL31P62899 125 aaKnown RBP14.03□□□□□ -0.16
COL7A1-202ENST00000422991 NKAPLQ5M9Q1 402 aa14.03□□□□□ -0.16
COL7A1-202ENST00000422991 FOXB2Q5VYV0 432 aa14.03□□□□□ -0.16
COL7A1-202ENST00000422991 BRICD5Q6PL45 260 aa14.03□□□□□ -0.16
COL7A1-202ENST00000422991 RTN4RL2Q86UN3 420 aa14.03□□□□□ -0.16
COL7A1-202ENST00000422991 OR4M1Q8NGD0 313 aa14.03□□□□□ -0.16
COL7A1-202ENST00000422991 PLPPR1Q8TBJ4 325 aa14.03□□□□□ -0.16
COL7A1-202ENST00000422991 ACOT12Q8WYK0 555 aa14.03□□□□□ -0.16
COL7A1-202ENST00000422991 NEDD4LQ96PU5 975 aa14.03□□□□□ -0.16
COL7A1-202ENST00000422991 INSIG2Q9Y5U4 225 aa14.03□□□□□ -0.16
COL7A1-202ENST00000422991 KIR2DS1A0A191URI9 304 aa14.02□□□□□ -0.17
COL7A1-202ENST00000422991 METTL21EPA6NDL7 271 aa14.02□□□□□ -0.17
COL7A1-202ENST00000422991 MCRIP1C9JLW8 97 aa14.02□□□□□ -0.17
COL7A1-202ENST00000422991 RAB27BO00194 218 aa14.02□□□□□ -0.17
COL7A1-202ENST00000422991 LY6G6DO95868 133 aa14.02□□□□□ -0.17
COL7A1-202ENST00000422991 SOX6P35712 828 aa14.02□□□□□ -0.17
COL7A1-202ENST00000422991 AESQ08117 197 aa14.02□□□□□ -0.17
COL7A1-202ENST00000422991 RBM39Q14498 530 aaKnown RBP14.02□□□□□ -0.17
COL7A1-202ENST00000422991 MOGAT2Q3SYC2 334 aa14.02□□□□□ -0.17
COL7A1-202ENST00000422991 KRBOX4Q5JUW0 171 aa14.02□□□□□ -0.17
COL7A1-202ENST00000422991 DCAF12L2Q5VW00 463 aa14.02□□□□□ -0.17
COL7A1-202ENST00000422991 RSBN1Q5VWQ0 802 aaPredicted RBP14.02□□□□□ -0.17
COL7A1-202ENST00000422991 TCF23Q7RTU1 214 aa14.02□□□□□ -0.17
COL7A1-202ENST00000422991 C6orf201Q7Z4U5 140 aa14.02□□□□□ -0.17
COL7A1-202ENST00000422991 FAM185AQ8N0U4 392 aa14.02□□□□□ -0.17
COL7A1-202ENST00000422991 TPRX1Q8N7U7 411 aa14.02□□□□□ -0.17
COL7A1-202ENST00000422991 OR10R2Q8NGX6 335 aa14.02□□□□□ -0.17
COL7A1-202ENST00000422991 NEK7Q8TDX7 302 aa14.02□□□□□ -0.17
COL7A1-202ENST00000422991 AP3S1Q92572 193 aa14.02□□□□□ -0.17
COL7A1-202ENST00000422991 DMRTB1Q96MA1 342 aa14.02□□□□□ -0.17
COL7A1-202ENST00000422991 SULT4A1Q9BR01 284 aa14.02□□□□□ -0.17
COL7A1-202ENST00000422991 ATG5Q9H1Y0 275 aa14.02□□□□□ -0.17
COL7A1-202ENST00000422991 LPAR3Q9UBY5 353 aa14.02□□□□□ -0.17
COL7A1-202ENST00000422991 A0A0G2JMP0 313 aa14.01□□□□□ -0.17
COL7A1-202ENST00000422991 A0A0X1KG70 313 aa14.01□□□□□ -0.17
COL7A1-202ENST00000422991 A0A1W2PQ09 198 aa14.01□□□□□ -0.17
COL7A1-202ENST00000422991 ODAMA1E959 279 aa14.01□□□□□ -0.17
COL7A1-202ENST00000422991 FUOMA2VDF0 154 aa14.01□□□□□ -0.17
COL7A1-202ENST00000422991 PPIAL4GP0DN37 164 aa14.01□□□□□ -0.17
COL7A1-202ENST00000422991 GATA3P23771 443 aa14.01□□□□□ -0.17
COL7A1-202ENST00000422991 GLIPR1P48060 266 aa14.01□□□□□ -0.17
COL7A1-202ENST00000422991 TMEM50BP56557 158 aa14.01□□□□□ -0.17
COL7A1-202ENST00000422991 MEF2CQ06413 473 aaPredicted RBP14.01□□□□□ -0.17
COL7A1-202ENST00000422991 UBE2NLQ5JXB2 153 aa14.01□□□□□ -0.17
COL7A1-202ENST00000422991 BTNL3Q6UXE8 466 aa14.01□□□□□ -0.17
COL7A1-202ENST00000422991 ZNF497Q6ZNH5 498 aa14.01□□□□□ -0.17
COL7A1-202ENST00000422991 SAMD12Q8N8I0 201 aa14.01□□□□□ -0.17
COL7A1-202ENST00000422991 OR4M2Q8NGB6 313 aa14.01□□□□□ -0.17
COL7A1-202ENST00000422991 DGCR14Q96DF8 476 aaKnown RBP14.01□□□□□ -0.17
COL7A1-202ENST00000422991 ARHGAP5-AS1Q96IT6 56 aa14.01□□□□□ -0.17
COL7A1-202ENST00000422991 KIF25Q9UIL4 384 aa14.01□□□□□ -0.17
COL7A1-202ENST00000422991 HSF4Q9ULV5 492 aa14.01□□□□□ -0.17
COL7A1-202ENST00000422991 SONP18583 2426 aaKnown RBP14□□□□□ -0.17
COL7A1-202ENST00000422991 UBE2QL1A1L167 161 aa14□□□□□ -0.17
COL7A1-202ENST00000422991 SCGNO76038 276 aa14□□□□□ -0.17
COL7A1-202ENST00000422991 LIPFP07098 398 aa14□□□□□ -0.17
COL7A1-202ENST00000422991 ZNF273Q14593 569 aa14□□□□□ -0.17
COL7A1-202ENST00000422991 PLAC9Q5JTB6 97 aa14□□□□□ -0.17
COL7A1-202ENST00000422991 TMEM200BQ69YZ2 307 aa14□□□□□ -0.17
COL7A1-202ENST00000422991 SLC35E4Q6ICL7 350 aa14□□□□□ -0.17
COL7A1-202ENST00000422991 MZT2AQ6P582 158 aa14□□□□□ -0.17
COL7A1-202ENST00000422991 Q71RC1 249 aaPredicted RBP14□□□□□ -0.17
COL7A1-202ENST00000422991 CMTM4Q8IZR5 234 aa14□□□□□ -0.17
COL7A1-202ENST00000422991 KIR3DL3Q8N743 410 aa14□□□□□ -0.17
COL7A1-202ENST00000422991 DYRK2Q92630 601 aa14□□□□□ -0.17
COL7A1-202ENST00000422991 RAB3CQ96E17 227 aa14□□□□□ -0.17
COL7A1-202ENST00000422991 FAAP24Q9BTP7 215 aa14□□□□□ -0.17
COL7A1-202ENST00000422991 PECRQ9BY49 303 aa14□□□□□ -0.17
COL7A1-202ENST00000422991 SLIRPQ9GZT3 109 aaKnown RBP14□□□□□ -0.17
COL7A1-202ENST00000422991 ABCG5Q9H222 651 aa14□□□□□ -0.17
COL7A1-202ENST00000422991 NCOR1P1Q9H4R4 102 aa14□□□□□ -0.17
COL7A1-202ENST00000422991 PLEKHJ1Q9NW61 149 aa14□□□□□ -0.17
COL7A1-202ENST00000422991 ING3Q9NXR8 418 aa14□□□□□ -0.17
COL7A1-202ENST00000422991 ETAA1Q9NY74 926 aa14□□□□□ -0.17
COL7A1-202ENST00000422991 COMMD3Q9UBI1 195 aa14□□□□□ -0.17
COL7A1-202ENST00000422991 KCNS2Q9ULS6 477 aa14□□□□□ -0.17
COL7A1-202ENST00000422991 LINC00312Q9Y6C7 94 aa14□□□□□ -0.17
COL7A1-202ENST00000422991 hADV38S2A0JD32 116 aa13.99□□□□□ -0.17
COL7A1-202ENST00000422991 TMEM30CPA0ZSE6 113 aa13.99□□□□□ -0.17
COL7A1-202ENST00000422991 A6NHS1 94 aa13.99□□□□□ -0.17
COL7A1-202ENST00000422991 J3QLI3 93 aa13.99□□□□□ -0.17
COL7A1-202ENST00000422991 MFNGO00587 321 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms