RNA–Protein interactions for RNA: ENST00000420166.5

HMGXB4-203, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 1,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-203ENST00000420166 TPRA1Q86W33 373 aa16.93■□□□□ 0.3
HMGXB4-203ENST00000420166 BPIFB2Q8N4F0 458 aa16.93■□□□□ 0.3
HMGXB4-203ENST00000420166 LHX4Q969G2 390 aa16.93■□□□□ 0.3
HMGXB4-203ENST00000420166 CENPOQ9BU64 300 aa16.93■□□□□ 0.3
HMGXB4-203ENST00000420166 MRPS26Q9BYN8 205 aaKnown RBP16.93■□□□□ 0.3
HMGXB4-203ENST00000420166 RNF167Q9H6Y7 350 aa16.93■□□□□ 0.3
HMGXB4-203ENST00000420166 SPACA1Q9HBV2 294 aa16.93■□□□□ 0.3
HMGXB4-203ENST00000420166 ING3Q9NXR8 418 aa16.93■□□□□ 0.3
HMGXB4-203ENST00000420166 RCC2Q9P258 522 aaKnown RBP16.93■□□□□ 0.3
HMGXB4-203ENST00000420166 ZNF69Q9UC07 566 aa16.93■□□□□ 0.3
HMGXB4-203ENST00000420166 STEAP1Q9UHE8 339 aa16.93■□□□□ 0.3
HMGXB4-203ENST00000420166 CENPVL3A0A0U1RRI6 287 aa16.92■□□□□ 0.3
HMGXB4-203ENST00000420166 ODAMA1E959 279 aa16.92■□□□□ 0.3
HMGXB4-203ENST00000420166 IFITM5A6NNB3 132 aa16.92■□□□□ 0.3
HMGXB4-203ENST00000420166 IFNA2P01563 188 aa16.92■□□□□ 0.3
HMGXB4-203ENST00000420166 ZNF728P0DKX0 622 aa16.92■□□□□ 0.3
HMGXB4-203ENST00000420166 ARSBP15848 533 aa16.92■□□□□ 0.3
HMGXB4-203ENST00000420166 PRTN3P24158 256 aa16.92■□□□□ 0.3
HMGXB4-203ENST00000420166 DLX1P56177 255 aa16.92■□□□□ 0.3
HMGXB4-203ENST00000420166 RPS27AP62979 156 aaKnown RBP16.92■□□□□ 0.3
HMGXB4-203ENST00000420166 PAX5Q02548 391 aa16.92■□□□□ 0.3
HMGXB4-203ENST00000420166 METAP1DQ6UB28 335 aaPredicted RBP16.92■□□□□ 0.3
HMGXB4-203ENST00000420166 PRIMA1Q86XR5 153 aa16.92■□□□□ 0.3
HMGXB4-203ENST00000420166 C11orf42Q8N5U0 333 aa16.92■□□□□ 0.3
HMGXB4-203ENST00000420166 OR51D1Q8NGF3 324 aa16.92■□□□□ 0.3
HMGXB4-203ENST00000420166 PLPPR1Q8TBJ4 325 aa16.92■□□□□ 0.3
HMGXB4-203ENST00000420166 TNFRSF14Q92956 283 aa16.92■□□□□ 0.3
HMGXB4-203ENST00000420166 FAM3DQ96BQ1 224 aa16.92■□□□□ 0.3
HMGXB4-203ENST00000420166 ZNF714Q96N38 554 aa16.92■□□□□ 0.3
HMGXB4-203ENST00000420166 IGHV1-69DA0A0B4J2H0 117 aa16.91■□□□□ 0.3
HMGXB4-203ENST00000420166 hCG_1809904A0A1W2PP81 198 aa16.91■□□□□ 0.3
HMGXB4-203ENST00000420166 A0A1W2PPE2 198 aa16.91■□□□□ 0.3
HMGXB4-203ENST00000420166 A0A1W2PR64 198 aa16.91■□□□□ 0.3
HMGXB4-203ENST00000420166 A0A1W2PRV1 198 aa16.91■□□□□ 0.3
HMGXB4-203ENST00000420166 SMIM30A4D0T7 59 aa16.91■□□□□ 0.3
HMGXB4-203ENST00000420166 C17orf98A8MV24 154 aa16.91■□□□□ 0.3
HMGXB4-203ENST00000420166 AIPO00170 330 aa16.91■□□□□ 0.3
HMGXB4-203ENST00000420166 AIREO43918 545 aa16.91■□□□□ 0.3
HMGXB4-203ENST00000420166 IGHV1-69P01742 117 aa16.91■□□□□ 0.3
HMGXB4-203ENST00000420166 RBP4P02753 201 aa16.91■□□□□ 0.3
HMGXB4-203ENST00000420166 SDC2P34741 201 aa16.91■□□□□ 0.3
HMGXB4-203ENST00000420166 RSBN1Q5VWQ0 802 aaPredicted RBP16.91■□□□□ 0.3
HMGXB4-203ENST00000420166 SIGIRRQ6IA17 410 aa16.91■□□□□ 0.3
HMGXB4-203ENST00000420166 C9orf139Q6ZV77 190 aa16.91■□□□□ 0.3
HMGXB4-203ENST00000420166 OR13F1Q8NGS4 319 aa16.91■□□□□ 0.3
HMGXB4-203ENST00000420166 TM2D1Q9BX74 207 aa16.91■□□□□ 0.3
HMGXB4-203ENST00000420166 BARHL1Q9BZE3 327 aa16.91■□□□□ 0.3
HMGXB4-203ENST00000420166 MS4A7Q9GZW8 240 aaPredicted RBP16.91■□□□□ 0.3
HMGXB4-203ENST00000420166 NCOR1P1Q9H4R4 102 aa16.91■□□□□ 0.3
HMGXB4-203ENST00000420166 FBLN5Q9UBX5 448 aa16.91■□□□□ 0.3
HMGXB4-203ENST00000420166 UBE2J1Q9Y385 318 aaPredicted RBP16.91■□□□□ 0.3
HMGXB4-203ENST00000420166 TRGV10A0A0A0MS01 117 aa16.9■□□□□ 0.3
HMGXB4-203ENST00000420166 NOTOA8MTQ0 251 aa16.9■□□□□ 0.3
HMGXB4-203ENST00000420166 RNASEK-C17orf49H0YIS7 233 aa16.9■□□□□ 0.3
HMGXB4-203ENST00000420166 FUT3P21217 361 aa16.9■□□□□ 0.3
HMGXB4-203ENST00000420166 FPR2P25090 351 aa16.9■□□□□ 0.3
HMGXB4-203ENST00000420166 BPIFB3P59826 476 aa16.9■□□□□ 0.3
HMGXB4-203ENST00000420166 PRB3Q04118 309 aaPredicted RBP16.9■□□□□ 0.3
HMGXB4-203ENST00000420166 KLRD1Q13241 179 aa16.9■□□□□ 0.3
HMGXB4-203ENST00000420166 NCR3LG1Q68D85 454 aa16.9■□□□□ 0.3
HMGXB4-203ENST00000420166 RAB12Q6IQ22 244 aa16.9■□□□□ 0.3
HMGXB4-203ENST00000420166 BRICD5Q6PL45 260 aa16.9■□□□□ 0.3
HMGXB4-203ENST00000420166 BRD3OSQ6XYD6 125 aa16.9■□□□□ 0.3
HMGXB4-203ENST00000420166 TRAPPC6BQ86SZ2 158 aa16.9■□□□□ 0.3
HMGXB4-203ENST00000420166 NEK7Q8TDX7 302 aa16.9■□□□□ 0.3
HMGXB4-203ENST00000420166 C22orf15Q8WYQ4 148 aa16.9■□□□□ 0.3
HMGXB4-203ENST00000420166 CORO2AQ92828 525 aa16.9■□□□□ 0.3
HMGXB4-203ENST00000420166 KIF25Q9UIL4 384 aa16.9■□□□□ 0.3
HMGXB4-203ENST00000420166 SVEP1Q4LDE5 3571 aa16.89■□□□□ 0.29
HMGXB4-203ENST00000420166 MCRIP1C9JLW8 97 aa16.89■□□□□ 0.29
HMGXB4-203ENST00000420166 H3BUI4 141 aa16.89■□□□□ 0.29
HMGXB4-203ENST00000420166 LDLRAD4O15165 306 aa16.89■□□□□ 0.29
HMGXB4-203ENST00000420166 PDCD6O75340 191 aa16.89■□□□□ 0.29
HMGXB4-203ENST00000420166 ERVFRD-1P60508 538 aa16.89■□□□□ 0.29
HMGXB4-203ENST00000420166 GUCA2AQ02747 115 aa16.89■□□□□ 0.29
HMGXB4-203ENST00000420166 TUSC1Q2TAM9 212 aa16.89■□□□□ 0.29
HMGXB4-203ENST00000420166 C2orf76Q3KRA6 126 aa16.89■□□□□ 0.29
HMGXB4-203ENST00000420166 RUSC1-AS1Q66K80 236 aa16.89■□□□□ 0.29
HMGXB4-203ENST00000420166 PDZD9Q8IXQ8 264 aa16.89■□□□□ 0.29
HMGXB4-203ENST00000420166 BCL6BQ8N143 479 aaPredicted RBP16.89■□□□□ 0.29
HMGXB4-203ENST00000420166 SLC6A7Q99884 636 aa16.89■□□□□ 0.29
HMGXB4-203ENST00000420166 NICN1Q9BSH3 213 aa16.89■□□□□ 0.29
HMGXB4-203ENST00000420166 FUNDC2Q9BWH2 189 aa16.89■□□□□ 0.29
HMGXB4-203ENST00000420166 LPAR5Q9H1C0 372 aa16.89■□□□□ 0.29
HMGXB4-203ENST00000420166 OCEL1Q9H607 264 aa16.89■□□□□ 0.29
HMGXB4-203ENST00000420166 TAS2R3Q9NYW6 316 aa16.89■□□□□ 0.29
HMGXB4-203ENST00000420166 OR6C3Q9NZP0 311 aa16.89■□□□□ 0.29
HMGXB4-203ENST00000420166 PEX16Q9Y5Y5 336 aa16.89■□□□□ 0.29
HMGXB4-203ENST00000420166 MEIKINA0A087WXM9 373 aa16.88■□□□□ 0.29
HMGXB4-203ENST00000420166 A0A0B4J203 849 aa16.88■□□□□ 0.29
HMGXB4-203ENST00000420166 TMEM272A0A1B0GTI8 110 aa16.88■□□□□ 0.29
HMGXB4-203ENST00000420166 GLAP06280 429 aa16.88■□□□□ 0.29
HMGXB4-203ENST00000420166 CLEC2LP0C7M8 214 aa16.88■□□□□ 0.29
HMGXB4-203ENST00000420166 SLC2A2P11168 524 aaPredicted RBP16.88■□□□□ 0.29
HMGXB4-203ENST00000420166 RBM39Q14498 530 aaKnown RBP16.88■□□□□ 0.29
HMGXB4-203ENST00000420166 SLC35E4Q6ICL7 350 aa16.88■□□□□ 0.29
HMGXB4-203ENST00000420166 HCP5Q6MZN7 132 aa16.88■□□□□ 0.29
HMGXB4-203ENST00000420166 ZNF782Q6ZMW2 699 aaPredicted RBP16.88■□□□□ 0.29
HMGXB4-203ENST00000420166 URM1Q9BTM9 101 aaKnown RBP16.88■□□□□ 0.29
HMGXB4-203ENST00000420166 GAL3ST2Q9H3Q3 398 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms