RNA–Protein interactions for RNA: ENST00000417521.5

DDR1-231, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5

Gene DDR1, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-231	ENST00000417521	PNKD	Q8N490	385 aa		13.36	□□□□□ -0.27
DDR1-231	ENST00000417521	PXT1	Q8NFP0	134 aa		13.36	□□□□□ -0.27
DDR1-231	ENST00000417521	SGMS2	Q8NHU3	365 aa		13.36	□□□□□ -0.27
DDR1-231	ENST00000417521	KCTD7	Q96MP8	289 aa		13.36	□□□□□ -0.27
DDR1-231	ENST00000417521	UQCC2	Q9BRT2	126 aa		13.36	□□□□□ -0.27
DDR1-231	ENST00000417521	HMG20A	Q9NP66	347 aa		13.36	□□□□□ -0.27
DDR1-231	ENST00000417521	GLS2	Q9UI32	602 aa		13.36	□□□□□ -0.27
DDR1-231	ENST00000417521	TMEM82	A0PJX8	343 aa		13.36	□□□□□ -0.27
DDR1-231	ENST00000417521	NDUFA7	O95182	113 aa		13.36	□□□□□ -0.27
DDR1-231	ENST00000417521	CD37	P11049	281 aa		13.36	□□□□□ -0.27
DDR1-231	ENST00000417521	CCL3L1	P16619	93 aa		13.36	□□□□□ -0.27
DDR1-231	ENST00000417521	PRKACA	P17612	351 aa		13.36	□□□□□ -0.27
DDR1-231	ENST00000417521	SDC2	P34741	201 aa		13.36	□□□□□ -0.27
DDR1-231	ENST00000417521	RPL5	P46777	297 aa	Known RBP	13.36	□□□□□ -0.27
DDR1-231	ENST00000417521	MEF2C	Q06413	473 aa	Predicted RBP	13.36	□□□□□ -0.27
DDR1-231	ENST00000417521	ZNF273	Q14593	569 aa		13.36	□□□□□ -0.27
DDR1-231	ENST00000417521	RSU1	Q15404	277 aa		13.36	□□□□□ -0.27
DDR1-231	ENST00000417521	C1orf100	Q5SVJ3	147 aa		13.36	□□□□□ -0.27
DDR1-231	ENST00000417521	AWAT2	Q6E213	333 aa		13.36	□□□□□ -0.27
DDR1-231	ENST00000417521	GLIPR1L1	Q6UWM5	242 aa		13.36	□□□□□ -0.27
DDR1-231	ENST00000417521	C17orf107	Q6ZR85	190 aa		13.36	□□□□□ -0.27
DDR1-231	ENST00000417521	SLC16A12	Q6ZSM3	486 aa		13.36	□□□□□ -0.27
DDR1-231	ENST00000417521	NR2C2AP	Q86WQ0	139 aa		13.36	□□□□□ -0.27
DDR1-231	ENST00000417521	TAF15	Q92804	592 aa	Known RBP eCLIP	13.36	□□□□□ -0.27
DDR1-231	ENST00000417521	C1RL	Q9NZP8	487 aa		13.36	□□□□□ -0.27
DDR1-231	ENST00000417521		A0A1W2PP11	408 aa		13.35	□□□□□ -0.27
DDR1-231	ENST00000417521	BTBD17	A6NE02	478 aa		13.35	□□□□□ -0.27
DDR1-231	ENST00000417521	C17orf98	A8MV24	154 aa		13.35	□□□□□ -0.27
DDR1-231	ENST00000417521	GPR137B	O60478	399 aa		13.35	□□□□□ -0.27
DDR1-231	ENST00000417521	HTR3B	O95264	441 aa		13.35	□□□□□ -0.27
DDR1-231	ENST00000417521	RBP4	P02753	201 aa		13.35	□□□□□ -0.27
DDR1-231	ENST00000417521	CLEC2L	P0C7M8	214 aa		13.35	□□□□□ -0.27
DDR1-231	ENST00000417521	RAB3B	P20337	219 aa		13.35	□□□□□ -0.27
DDR1-231	ENST00000417521	MDK	P21741	143 aa	Predicted RBP	13.35	□□□□□ -0.27
DDR1-231	ENST00000417521	DUSP1	P28562	367 aa		13.35	□□□□□ -0.27
DDR1-231	ENST00000417521	MTNR1B	P49286	362 aa		13.35	□□□□□ -0.27
DDR1-231	ENST00000417521	DLX6	P56179	175 aa		13.35	□□□□□ -0.27
DDR1-231	ENST00000417521	EDDM3B	P56851	147 aa		13.35	□□□□□ -0.27
DDR1-231	ENST00000417521	ERVFRD-1	P60508	538 aa		13.35	□□□□□ -0.27
DDR1-231	ENST00000417521	MXD1	Q05195	221 aa		13.35	□□□□□ -0.27
DDR1-231	ENST00000417521	SLC22A6	Q4U2R8	563 aa		13.35	□□□□□ -0.27
DDR1-231	ENST00000417521	GDPGP1	Q6ZNW5	385 aa		13.35	□□□□□ -0.27
DDR1-231	ENST00000417521	BEND2	Q8NDZ0	799 aa		13.35	□□□□□ -0.27
DDR1-231	ENST00000417521	OR4F5	Q8NH21	305 aa		13.35	□□□□□ -0.27
DDR1-231	ENST00000417521	PPP1R35	Q8TAP8	253 aa		13.35	□□□□□ -0.27
DDR1-231	ENST00000417521	FOXRED1	Q96CU9	486 aa	Predicted RBP	13.35	□□□□□ -0.27
DDR1-231	ENST00000417521	S100A13	Q99584	98 aa		13.35	□□□□□ -0.27
DDR1-231	ENST00000417521	METTL9	Q9H1A3	318 aa		13.35	□□□□□ -0.27
DDR1-231	ENST00000417521	BEX1	Q9HBH7	125 aa		13.35	□□□□□ -0.27
DDR1-231	ENST00000417521		V9GY05	133 aa		13.35	□□□□□ -0.27
DDR1-231	ENST00000417521	PDCD5	O14737	125 aa		13.34	□□□□□ -0.27
DDR1-231	ENST00000417521	SH2D1B	O14796	132 aa		13.34	□□□□□ -0.27
DDR1-231	ENST00000417521	SLC22A1	O15245	554 aa		13.34	□□□□□ -0.27
DDR1-231	ENST00000417521	WIPF1	O43516	503 aa		13.34	□□□□□ -0.27
DDR1-231	ENST00000417521	ZNF728	P0DKX0	622 aa		13.34	□□□□□ -0.27
DDR1-231	ENST00000417521	SERPINA2	P20848	420 aa		13.34	□□□□□ -0.27
DDR1-231	ENST00000417521	OMG	P23515	440 aa		13.34	□□□□□ -0.27
DDR1-231	ENST00000417521	GABRR1	P24046	479 aa		13.34	□□□□□ -0.27
DDR1-231	ENST00000417521	RAG2	P55895	527 aa		13.34	□□□□□ -0.27
DDR1-231	ENST00000417521	RELB	Q01201	579 aa		13.34	□□□□□ -0.27
DDR1-231	ENST00000417521	GRK1	Q15835	563 aa		13.34	□□□□□ -0.27
DDR1-231	ENST00000417521	TAF9	Q16594	264 aa		13.34	□□□□□ -0.27
DDR1-231	ENST00000417521	ANKRD13B	Q86YJ7	626 aa		13.34	□□□□□ -0.27
DDR1-231	ENST00000417521	OR5R1	Q8NH85	324 aa		13.34	□□□□□ -0.27
DDR1-231	ENST00000417521	MEGF9	Q9H1U4	602 aa		13.34	□□□□□ -0.27
DDR1-231	ENST00000417521	PLGRKT	Q9HBL7	147 aa		13.34	□□□□□ -0.27
DDR1-231	ENST00000417521		A0A0G2JK05	382 aa		13.33	□□□□□ -0.28
DDR1-231	ENST00000417521	hADV38S2	A0JD32	116 aa		13.33	□□□□□ -0.28
DDR1-231	ENST00000417521	SLC17A2	O00624	439 aa		13.33	□□□□□ -0.28
DDR1-231	ENST00000417521	MGST3	O14880	152 aa		13.33	□□□□□ -0.28
DDR1-231	ENST00000417521	PSPN	O60542	156 aa		13.33	□□□□□ -0.28
DDR1-231	ENST00000417521	LMO1	P25800	156 aa		13.33	□□□□□ -0.28
DDR1-231	ENST00000417521	HTR2C	P28335	458 aa		13.33	□□□□□ -0.28
DDR1-231	ENST00000417521	ERP29	P30040	261 aa	Known RBP	13.33	□□□□□ -0.28
DDR1-231	ENST00000417521	CLDN12	P56749	244 aa		13.33	□□□□□ -0.28
DDR1-231	ENST00000417521	VBP1	P61758	197 aa		13.33	□□□□□ -0.28
DDR1-231	ENST00000417521	NCS1	P62166	190 aa		13.33	□□□□□ -0.28
DDR1-231	ENST00000417521	P2RY14	Q15391	338 aa		13.33	□□□□□ -0.28
DDR1-231	ENST00000417521	HES5	Q5TA89	166 aa		13.33	□□□□□ -0.28
DDR1-231	ENST00000417521	ELP2	Q6IA86	826 aa		13.33	□□□□□ -0.28
DDR1-231	ENST00000417521	OR6M1	Q8NGM8	313 aa		13.33	□□□□□ -0.28
DDR1-231	ENST00000417521	KCNK15	Q9H427	330 aa		13.33	□□□□□ -0.28
DDR1-231	ENST00000417521	IL36G	Q9NZH8	169 aa		13.33	□□□□□ -0.28
DDR1-231	ENST00000417521	VPREB3	Q9UKI3	123 aa		13.33	□□□□□ -0.28
DDR1-231	ENST00000417521	GABARAP	O95166	117 aa		13.32	□□□□□ -0.28
DDR1-231	ENST00000417521	CSTB	P04080	98 aa	Known RBP	13.32	□□□□□ -0.28
DDR1-231	ENST00000417521	PSMD7	P51665	324 aa		13.32	□□□□□ -0.28
DDR1-231	ENST00000417521	RAB11B	Q15907	218 aa		13.32	□□□□□ -0.28
DDR1-231	ENST00000417521	AANAT	Q16613	207 aa		13.32	□□□□□ -0.28
DDR1-231	ENST00000417521	CTF1	Q16619	201 aa		13.32	□□□□□ -0.28
DDR1-231	ENST00000417521	PIGY	Q3MUY2	71 aa		13.32	□□□□□ -0.28
DDR1-231	ENST00000417521	TPRA1	Q86W33	373 aa		13.32	□□□□□ -0.28
DDR1-231	ENST00000417521	CLVS1	Q8IUQ0	354 aa	Predicted RBP	13.32	□□□□□ -0.28
DDR1-231	ENST00000417521	TMEM104	Q8NE00	496 aa		13.32	□□□□□ -0.28
DDR1-231	ENST00000417521		Q8NFD4	153 aa		13.32	□□□□□ -0.28
DDR1-231	ENST00000417521	OR4S1	Q8NGB4	309 aa		13.32	□□□□□ -0.28
DDR1-231	ENST00000417521	AJUBA	Q96IF1	538 aa		13.32	□□□□□ -0.28
DDR1-231	ENST00000417521	ZNF714	Q96N38	554 aa		13.32	□□□□□ -0.28
DDR1-231	ENST00000417521	CHST6	Q9GZX3	395 aa		13.32	□□□□□ -0.28
DDR1-231	ENST00000417521	BANF2	Q9H503	90 aa		13.32	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms