RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 KCNK15Q9H427 330 aa14.61□□□□□ -0.07
VCP-202ENST00000417448 VPREB3Q9UKI3 123 aa14.61□□□□□ -0.07
VCP-202ENST00000417448 MRPS28Q9Y2Q9 187 aaKnown RBP14.61□□□□□ -0.07
VCP-202ENST00000417448 AK6Q9Y3D8 172 aaKnown RBP14.61□□□□□ -0.07
VCP-202ENST00000417448 EPPK1P58107 5090 aaKnown RBP14.61□□□□□ -0.07
VCP-202ENST00000417448 A0A1W2PQ09 198 aa14.6□□□□□ -0.07
VCP-202ENST00000417448 K7N7A8 449 aa14.6□□□□□ -0.07
VCP-202ENST00000417448 OR2H2O95918 312 aa14.6□□□□□ -0.07
VCP-202ENST00000417448 GABRA5P31644 462 aa14.6□□□□□ -0.07
VCP-202ENST00000417448 CAV3P56539 151 aa14.6□□□□□ -0.07
VCP-202ENST00000417448 EDDM3AQ14507 147 aa14.6□□□□□ -0.07
VCP-202ENST00000417448 SLC35E4Q6ICL7 350 aa14.6□□□□□ -0.07
VCP-202ENST00000417448 GLIPR1L1Q6UWM5 242 aa14.6□□□□□ -0.07
VCP-202ENST00000417448 LYPD6Q86Y78 171 aa14.6□□□□□ -0.07
VCP-202ENST00000417448 CFHR4Q92496 578 aa14.6□□□□□ -0.07
VCP-202ENST00000417448 METTL9Q9H1A3 318 aa14.6□□□□□ -0.07
VCP-202ENST00000417448 DPAGT1Q9H3H5 408 aa14.6□□□□□ -0.07
VCP-202ENST00000417448 SIGLEC9Q9Y336 463 aa14.6□□□□□ -0.07
VCP-202ENST00000417448 HSPB6O14558 160 aa14.59□□□□□ -0.07
VCP-202ENST00000417448 SH2D1BO14796 132 aa14.59□□□□□ -0.07
VCP-202ENST00000417448 ECDO95905 644 aaPredicted RBP14.59□□□□□ -0.07
VCP-202ENST00000417448 ZNF44P15621 663 aa14.59□□□□□ -0.07
VCP-202ENST00000417448 CALRP27797 417 aaKnown RBP14.59□□□□□ -0.07
VCP-202ENST00000417448 ZNF146Q15072 292 aa14.59□□□□□ -0.07
VCP-202ENST00000417448 PNLDC1Q8NA58 520 aaKnown RBP14.59□□□□□ -0.07
VCP-202ENST00000417448 TSPAN14Q8NG11 270 aa14.59□□□□□ -0.07
VCP-202ENST00000417448 S100A13Q99584 98 aa14.59□□□□□ -0.07
VCP-202ENST00000417448 PPA2Q9H2U2 334 aa14.59□□□□□ -0.07
VCP-202ENST00000417448 BANF2Q9H503 90 aa14.59□□□□□ -0.07
VCP-202ENST00000417448 EXOSC4Q9NPD3 245 aaKnown RBP14.59□□□□□ -0.07
VCP-202ENST00000417448 NDUFB11Q9NX14 153 aa14.59□□□□□ -0.07
VCP-202ENST00000417448 ZNRD1Q9P1U0 126 aa14.59□□□□□ -0.07
VCP-202ENST00000417448 FBLN5Q9UBX5 448 aa14.59□□□□□ -0.07
VCP-202ENST00000417448 A0A1W2PRD5 423 aa14.58□□□□□ -0.08
VCP-202ENST00000417448 A0A1W2PRF3 423 aa14.58□□□□□ -0.08
VCP-202ENST00000417448 A0A1W2PRM7 423 aa14.58□□□□□ -0.08
VCP-202ENST00000417448 SHISA3A0PJX4 238 aa14.58□□□□□ -0.08
VCP-202ENST00000417448 SMIM30A4D0T7 59 aa14.58□□□□□ -0.08
VCP-202ENST00000417448 CCRL2O00421 344 aa14.58□□□□□ -0.08
VCP-202ENST00000417448 DEGS1O15121 323 aa14.58□□□□□ -0.08
VCP-202ENST00000417448 MPIG6BO95866 241 aa14.58□□□□□ -0.08
VCP-202ENST00000417448 OR3A1P47881 315 aa14.58□□□□□ -0.08
VCP-202ENST00000417448 MTNR1BP49286 362 aa14.58□□□□□ -0.08
VCP-202ENST00000417448 EDDM3BP56851 147 aa14.58□□□□□ -0.08
VCP-202ENST00000417448 ZNF273Q14593 569 aa14.58□□□□□ -0.08
VCP-202ENST00000417448 TRAM1Q15629 374 aa14.58□□□□□ -0.08
VCP-202ENST00000417448 GRK1Q15835 563 aa14.58□□□□□ -0.08
VCP-202ENST00000417448 METTL11BQ5VVY1 283 aa14.58□□□□□ -0.08
VCP-202ENST00000417448 TMEM200BQ69YZ2 307 aa14.58□□□□□ -0.08
VCP-202ENST00000417448 AWAT2Q6E213 333 aa14.58□□□□□ -0.08
VCP-202ENST00000417448 C22orf42Q6IC83 251 aa14.58□□□□□ -0.08
VCP-202ENST00000417448 OR10K2Q6IF99 312 aa14.58□□□□□ -0.08
VCP-202ENST00000417448 Q8N7P7 452 aa14.58□□□□□ -0.08
VCP-202ENST00000417448 CPNE2Q96FN4 548 aaPredicted RBP14.58□□□□□ -0.08
VCP-202ENST00000417448 SNX22Q96L94 193 aa14.58□□□□□ -0.08
VCP-202ENST00000417448 SIRT7Q9NRC8 400 aa14.58□□□□□ -0.08
VCP-202ENST00000417448 SLC33A1O00400 549 aaPredicted RBP14.57□□□□□ -0.08
VCP-202ENST00000417448 TNFAIP8O95379 198 aa14.57□□□□□ -0.08
VCP-202ENST00000417448 LIPFP07098 398 aa14.57□□□□□ -0.08
VCP-202ENST00000417448 CCL3L1P16619 93 aa14.57□□□□□ -0.08
VCP-202ENST00000417448 RPL31P62899 125 aaKnown RBP14.57□□□□□ -0.08
VCP-202ENST00000417448 KLRD1Q13241 179 aa14.57□□□□□ -0.08
VCP-202ENST00000417448 P2RY14Q15391 338 aa14.57□□□□□ -0.08
VCP-202ENST00000417448 SPIN3Q5JUX0 258 aa14.57□□□□□ -0.08
VCP-202ENST00000417448 FOXB2Q5VYV0 432 aa14.57□□□□□ -0.08
VCP-202ENST00000417448 ELP2Q6IA86 826 aa14.57□□□□□ -0.08
VCP-202ENST00000417448 VMO1Q7Z5L0 202 aa14.57□□□□□ -0.08
VCP-202ENST00000417448 LYG1Q8N1E2 194 aa14.57□□□□□ -0.08
VCP-202ENST00000417448 OSR2Q8N2R0 312 aa14.57□□□□□ -0.08
VCP-202ENST00000417448 TMEM104Q8NE00 496 aa14.57□□□□□ -0.08
VCP-202ENST00000417448 C8orf46Q8TAG6 207 aa14.57□□□□□ -0.08
VCP-202ENST00000417448 FCGR1BQ92637 280 aa14.57□□□□□ -0.08
VCP-202ENST00000417448 THRSPQ92748 146 aa14.57□□□□□ -0.08
VCP-202ENST00000417448 FAM46BQ96A09 425 aa14.57□□□□□ -0.08
VCP-202ENST00000417448 OR51E2Q9H255 320 aa14.57□□□□□ -0.08
VCP-202ENST00000417448 RNF167Q9H6Y7 350 aa14.57□□□□□ -0.08
VCP-202ENST00000417448 GLS2Q9UI32 602 aa14.57□□□□□ -0.08
VCP-202ENST00000417448 ST3GAL6Q9Y274 331 aa14.57□□□□□ -0.08
VCP-202ENST00000417448 K7EIL1 84 aa14.56□□□□□ -0.08
VCP-202ENST00000417448 GEMIN2O14893 280 aaKnown RBP14.56□□□□□ -0.08
VCP-202ENST00000417448 CSTBP04080 98 aaKnown RBP14.56□□□□□ -0.08
VCP-202ENST00000417448 PSMA1P25786 263 aaKnown RBP14.56□□□□□ -0.08
VCP-202ENST00000417448 EFNB2P52799 333 aa14.56□□□□□ -0.08
VCP-202ENST00000417448 AESQ08117 197 aa14.56□□□□□ -0.08
VCP-202ENST00000417448 ATXN7L3Q14CW9 347 aaPredicted RBP14.56□□□□□ -0.08
VCP-202ENST00000417448 GDPD3Q7L5L3 318 aa14.56□□□□□ -0.08
VCP-202ENST00000417448 OR8H2Q8N162 312 aa14.56□□□□□ -0.08
VCP-202ENST00000417448 PNKDQ8N490 385 aa14.56□□□□□ -0.08
VCP-202ENST00000417448 OR51T1Q8NGJ9 327 aa14.56□□□□□ -0.08
VCP-202ENST00000417448 PHYHIPQ92561 330 aa14.56□□□□□ -0.08
VCP-202ENST00000417448 WWC2-AS2Q96NR7 200 aa14.56□□□□□ -0.08
VCP-202ENST00000417448 DYNC2H1Q8NCM8 4307 aaKnown RBP14.55□□□□□ -0.08
VCP-202ENST00000417448 A0A087WXM4 84 aa14.55□□□□□ -0.08
VCP-202ENST00000417448 TRAV24A0A0B4J272 114 aa14.55□□□□□ -0.08
VCP-202ENST00000417448 TRDV1A0A1B0GX56 115 aa14.55□□□□□ -0.08
VCP-202ENST00000417448 MEGF11A6BM72 1044 aa14.55□□□□□ -0.08
VCP-202ENST00000417448 CRTAPO75718 401 aaPredicted RBP14.55□□□□□ -0.08
VCP-202ENST00000417448 GADD45AP24522 165 aa14.55□□□□□ -0.08
VCP-202ENST00000417448 GLIPR1P48060 266 aa14.55□□□□□ -0.08
VCP-202ENST00000417448 CLDN12P56749 244 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms