RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 UBE2J1Q9Y385 318 aaPredicted RBP18.95■□□□□ 0.62
SMARCB1-205ENST00000417137 IGHV1-69DA0A0B4J2H0 117 aa18.94■□□□□ 0.62
SMARCB1-205ENST00000417137 TCF21O43680 179 aa18.94■□□□□ 0.62
SMARCB1-205ENST00000417137 MPIG6BO95866 241 aa18.94■□□□□ 0.62
SMARCB1-205ENST00000417137 IGHV1-69P01742 117 aa18.94■□□□□ 0.62
SMARCB1-205ENST00000417137 RBP4P02753 201 aa18.94■□□□□ 0.62
SMARCB1-205ENST00000417137 VSIG8P0DPA2 414 aa18.94■□□□□ 0.62
SMARCB1-205ENST00000417137 CCL3L1P16619 93 aa18.94■□□□□ 0.62
SMARCB1-205ENST00000417137 GLIPR1P48060 266 aa18.94■□□□□ 0.62
SMARCB1-205ENST00000417137 ERVFRD-1P60508 538 aa18.94■□□□□ 0.62
SMARCB1-205ENST00000417137 RBM39Q14498 530 aaKnown RBP18.94■□□□□ 0.62
SMARCB1-205ENST00000417137 TPRA1Q86W33 373 aa18.94■□□□□ 0.62
SMARCB1-205ENST00000417137 C22orf15Q8WYQ4 148 aa18.94■□□□□ 0.62
SMARCB1-205ENST00000417137 FAM46BQ96A09 425 aa18.94■□□□□ 0.62
SMARCB1-205ENST00000417137 SLC25A28Q96A46 364 aa18.94■□□□□ 0.62
SMARCB1-205ENST00000417137 Q96M66 194 aa18.94■□□□□ 0.62
SMARCB1-205ENST00000417137 KCTD7Q96MP8 289 aa18.94■□□□□ 0.62
SMARCB1-205ENST00000417137 CHCHD6Q9BRQ6 235 aa18.94■□□□□ 0.62
SMARCB1-205ENST00000417137 TMEM59Q9BXS4 323 aa18.94■□□□□ 0.62
SMARCB1-205ENST00000417137 ING3Q9NXR8 418 aa18.94■□□□□ 0.62
SMARCB1-205ENST00000417137 OR6C3Q9NZP0 311 aa18.94■□□□□ 0.62
SMARCB1-205ENST00000417137 ODAMA1E959 279 aa18.93■□□□□ 0.62
SMARCB1-205ENST00000417137 C17orf98A8MV24 154 aa18.93■□□□□ 0.62
SMARCB1-205ENST00000417137 MCRIP1C9JLW8 97 aa18.93■□□□□ 0.62
SMARCB1-205ENST00000417137 GADD45AP24522 165 aa18.93■□□□□ 0.62
SMARCB1-205ENST00000417137 P2RY14Q15391 338 aa18.93■□□□□ 0.62
SMARCB1-205ENST00000417137 BRD3OSQ6XYD6 125 aa18.93■□□□□ 0.62
SMARCB1-205ENST00000417137 GDPGP1Q6ZNW5 385 aa18.93■□□□□ 0.62
SMARCB1-205ENST00000417137 USP43Q70EL4 1123 aa18.93■□□□□ 0.62
SMARCB1-205ENST00000417137 OR2W3Q7Z3T1 314 aa18.93■□□□□ 0.62
SMARCB1-205ENST00000417137 ZNF565Q8N9K5 539 aa18.93■□□□□ 0.62
SMARCB1-205ENST00000417137 CORO2AQ92828 525 aa18.93■□□□□ 0.62
SMARCB1-205ENST00000417137 JMJD8Q96S16 334 aa18.93■□□□□ 0.62
SMARCB1-205ENST00000417137 SLC6A7Q99884 636 aa18.93■□□□□ 0.62
SMARCB1-205ENST00000417137 GAL3ST2Q9H3Q3 398 aa18.93■□□□□ 0.62
SMARCB1-205ENST00000417137 TAS2R3Q9NYW6 316 aa18.93■□□□□ 0.62
SMARCB1-205ENST00000417137 STEAP1Q9UHE8 339 aa18.93■□□□□ 0.62
SMARCB1-205ENST00000417137 LOC100506127A0A0U1RQW1 187 aa18.92■□□□□ 0.62
SMARCB1-205ENST00000417137 GLAP06280 429 aa18.92■□□□□ 0.62
SMARCB1-205ENST00000417137 FUT3P21217 361 aa18.92■□□□□ 0.62
SMARCB1-205ENST00000417137 UBE2E1P51965 193 aa18.92■□□□□ 0.62
SMARCB1-205ENST00000417137 DLX6P56179 175 aa18.92■□□□□ 0.62
SMARCB1-205ENST00000417137 PAX5Q02548 391 aa18.92■□□□□ 0.62
SMARCB1-205ENST00000417137 C11orf42Q8N5U0 333 aa18.92■□□□□ 0.62
SMARCB1-205ENST00000417137 NEK7Q8TDX7 302 aa18.92■□□□□ 0.62
SMARCB1-205ENST00000417137 TNFRSF14Q92956 283 aa18.92■□□□□ 0.62
SMARCB1-205ENST00000417137 COQ2Q96H96 371 aa18.92■□□□□ 0.62
SMARCB1-205ENST00000417137 URM1Q9BTM9 101 aaKnown RBP18.92■□□□□ 0.62
SMARCB1-205ENST00000417137 SVEP1Q4LDE5 3571 aa18.92■□□□□ 0.62
SMARCB1-205ENST00000417137 MEIKINA0A087WXM9 373 aa18.91■□□□□ 0.62
SMARCB1-205ENST00000417137 SHISA3A0PJX4 238 aa18.91■□□□□ 0.62
SMARCB1-205ENST00000417137 IFITM5A6NNB3 132 aa18.91■□□□□ 0.62
SMARCB1-205ENST00000417137 TMEM14DPA8MWL7 114 aa18.91■□□□□ 0.62
SMARCB1-205ENST00000417137 RNASEK-C17orf49H0YIS7 233 aa18.91■□□□□ 0.62
SMARCB1-205ENST00000417137 RPS27AP62979 156 aaKnown RBP18.91■□□□□ 0.62
SMARCB1-205ENST00000417137 OR10K2Q6IF99 312 aa18.91■□□□□ 0.62
SMARCB1-205ENST00000417137 RAB12Q6IQ22 244 aa18.91■□□□□ 0.62
SMARCB1-205ENST00000417137 PDZD9Q8IXQ8 264 aa18.91■□□□□ 0.62
SMARCB1-205ENST00000417137 BCL6BQ8N143 479 aaPredicted RBP18.91■□□□□ 0.62
SMARCB1-205ENST00000417137 FAM3DQ96BQ1 224 aa18.91■□□□□ 0.62
SMARCB1-205ENST00000417137 NEDD4LQ96PU5 975 aa18.91■□□□□ 0.62
SMARCB1-205ENST00000417137 RCC2Q9P258 522 aaKnown RBP18.91■□□□□ 0.62
SMARCB1-205ENST00000417137 PEX16Q9Y5Y5 336 aa18.91■□□□□ 0.62
SMARCB1-205ENST00000417137 MEX3AA1L020 520 aaKnown RBP18.9■□□□□ 0.62
SMARCB1-205ENST00000417137 QRFPP83859 136 aa18.9■□□□□ 0.62
SMARCB1-205ENST00000417137 C2orf76Q3KRA6 126 aa18.9■□□□□ 0.62
SMARCB1-205ENST00000417137 HES5Q5TA89 166 aa18.9■□□□□ 0.62
SMARCB1-205ENST00000417137 RSBN1Q5VWQ0 802 aaPredicted RBP18.9■□□□□ 0.62
SMARCB1-205ENST00000417137 SLC35E4Q6ICL7 350 aa18.9■□□□□ 0.62
SMARCB1-205ENST00000417137 TCF23Q7RTU1 214 aa18.9■□□□□ 0.62
SMARCB1-205ENST00000417137 OR51D1Q8NGF3 324 aa18.9■□□□□ 0.62
SMARCB1-205ENST00000417137 MDFIQ99750 246 aa18.9■□□□□ 0.62
SMARCB1-205ENST00000417137 TM2D1Q9BX74 207 aa18.9■□□□□ 0.62
SMARCB1-205ENST00000417137 ZNF581Q9P0T4 197 aa18.9■□□□□ 0.62
SMARCB1-205ENST00000417137 FBLN5Q9UBX5 448 aa18.9■□□□□ 0.62
SMARCB1-205ENST00000417137 KIF25Q9UIL4 384 aa18.9■□□□□ 0.62
SMARCB1-205ENST00000417137 TMEM30CPA0ZSE6 113 aa18.89■□□□□ 0.61
SMARCB1-205ENST00000417137 NOTOA8MTQ0 251 aa18.89■□□□□ 0.61
SMARCB1-205ENST00000417137 PDCD6O75340 191 aa18.89■□□□□ 0.61
SMARCB1-205ENST00000417137 IGHV1-8P0DP01 117 aa18.89■□□□□ 0.61
SMARCB1-205ENST00000417137 CFPP27918 469 aa18.89■□□□□ 0.61
SMARCB1-205ENST00000417137 OR10A3P58181 314 aa18.89■□□□□ 0.61
SMARCB1-205ENST00000417137 UNC119Q13432 240 aa18.89■□□□□ 0.61
SMARCB1-205ENST00000417137 RUSC1-AS1Q66K80 236 aa18.89■□□□□ 0.61
SMARCB1-205ENST00000417137 BRICD5Q6PL45 260 aa18.89■□□□□ 0.61
SMARCB1-205ENST00000417137 OR13D1Q8NGV5 346 aa18.89■□□□□ 0.61
SMARCB1-205ENST00000417137 SPATA3Q8NHX4 192 aa18.89■□□□□ 0.61
SMARCB1-205ENST00000417137 PLPPR1Q8TBJ4 325 aa18.89■□□□□ 0.61
SMARCB1-205ENST00000417137 YIPF6Q96EC8 236 aa18.89■□□□□ 0.61
SMARCB1-205ENST00000417137 FAM96BQ9Y3D0 163 aa18.89■□□□□ 0.61
SMARCB1-205ENST00000417137 ZNF729A6NN14 1252 aaPredicted RBP18.88■□□□□ 0.61
SMARCB1-205ENST00000417137 AIPO00170 330 aa18.88■□□□□ 0.61
SMARCB1-205ENST00000417137 NPFFO15130 113 aa18.88■□□□□ 0.61
SMARCB1-205ENST00000417137 AIREO43918 545 aa18.88■□□□□ 0.61
SMARCB1-205ENST00000417137 CA11O75493 328 aa18.88■□□□□ 0.61
SMARCB1-205ENST00000417137 DLX1P56177 255 aa18.88■□□□□ 0.61
SMARCB1-205ENST00000417137 CLDN12P56749 244 aa18.88■□□□□ 0.61
SMARCB1-205ENST00000417137 KLRD1Q13241 179 aa18.88■□□□□ 0.61
SMARCB1-205ENST00000417137 FAM189A2Q15884 450 aa18.88■□□□□ 0.61
SMARCB1-205ENST00000417137 OR52W1Q6IF63 320 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms