RNA–Protein interactions for RNA: ENST00000415560.1

HMGA1P1-201, Transcript of high mobility group AT-hook 1 pseudogene 1, humanhuman

BASIC

Gene HMGA1P1, Length 1,062 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P1-201ENST00000415560 SCGB3A2Q96PL1 93 aa11.96□□□□□ -0.49
HMGA1P1-201ENST00000415560 TINAGL1Q9GZM7 467 aaPredicted RBP11.96□□□□□ -0.49
HMGA1P1-201ENST00000415560 MMP28Q9H239 520 aa11.96□□□□□ -0.49
HMGA1P1-201ENST00000415560 PPA2Q9H2U2 334 aa11.96□□□□□ -0.49
HMGA1P1-201ENST00000415560 Q9N2K0 584 aa11.96□□□□□ -0.49
HMGA1P1-201ENST00000415560 KCNIP1Q9NZI2 227 aa11.96□□□□□ -0.49
HMGA1P1-201ENST00000415560 TRAPPC2LQ9UL33 140 aa11.96□□□□□ -0.49
HMGA1P1-201ENST00000415560 TANC2Q9HCD6 1990 aa11.96□□□□□ -0.5
HMGA1P1-201ENST00000415560 IGKV1D-17A0A075B6S4 117 aa11.95□□□□□ -0.5
HMGA1P1-201ENST00000415560 TMEM30CPA0ZSE6 113 aa11.95□□□□□ -0.5
HMGA1P1-201ENST00000415560 TRDCB7Z8K6 153 aa11.95□□□□□ -0.5
HMGA1P1-201ENST00000415560 INMT-MINDY4F8WBC2 141 aa11.95□□□□□ -0.5
HMGA1P1-201ENST00000415560 MGST3O14880 152 aa11.95□□□□□ -0.5
HMGA1P1-201ENST00000415560 CSN2P05814 226 aa11.95□□□□□ -0.5
HMGA1P1-201ENST00000415560 SOD3P08294 240 aa11.95□□□□□ -0.5
HMGA1P1-201ENST00000415560 H2AFB2P0C5Z0 115 aa11.95□□□□□ -0.5
HMGA1P1-201ENST00000415560 BTCP35070 178 aa11.95□□□□□ -0.5
HMGA1P1-201ENST00000415560 RAG2P55895 527 aa11.95□□□□□ -0.5
HMGA1P1-201ENST00000415560 BTG1P62324 171 aa11.95□□□□□ -0.5
HMGA1P1-201ENST00000415560 SRSF1Q07955 248 aaKnown RBP eCLIP11.95□□□□□ -0.5
HMGA1P1-201ENST00000415560 SCGB2B2Q4G0G5 96 aa11.95□□□□□ -0.5
HMGA1P1-201ENST00000415560 ATPAF1Q5TC12 328 aaPredicted RBP11.95□□□□□ -0.5
HMGA1P1-201ENST00000415560 ZNF497Q6ZNH5 498 aa11.95□□□□□ -0.5
HMGA1P1-201ENST00000415560 SLC36A1Q7Z2H8 476 aa11.95□□□□□ -0.5
HMGA1P1-201ENST00000415560 DEFB108BQ8NET1 73 aa11.95□□□□□ -0.5
HMGA1P1-201ENST00000415560 OR6F1Q8NGZ6 308 aa11.95□□□□□ -0.5
HMGA1P1-201ENST00000415560 ANGPTL6Q8NI99 470 aa11.95□□□□□ -0.5
HMGA1P1-201ENST00000415560 MRPL30Q8TCC3 161 aaKnown RBP11.95□□□□□ -0.5
HMGA1P1-201ENST00000415560 MAFIPQ8WZ33 124 aa11.95□□□□□ -0.5
HMGA1P1-201ENST00000415560 SDSLQ96GA7 329 aa11.95□□□□□ -0.5
HMGA1P1-201ENST00000415560 GINS4Q9BRT9 223 aa11.95□□□□□ -0.5
HMGA1P1-201ENST00000415560 MARVELD1Q9BSK0 173 aa11.95□□□□□ -0.5
HMGA1P1-201ENST00000415560 FAM234AQ9H0X4 552 aa11.95□□□□□ -0.5
HMGA1P1-201ENST00000415560 SLC2A8Q9NY64 477 aa11.95□□□□□ -0.5
HMGA1P1-201ENST00000415560 EHFQ9NZC4 300 aa11.95□□□□□ -0.5
HMGA1P1-201ENST00000415560 PLCE1Q9P212 2302 aa11.95□□□□□ -0.5
HMGA1P1-201ENST00000415560 ARFGEF3Q5TH69 2177 aa11.94□□□□□ -0.5
HMGA1P1-201ENST00000415560 SSX4O60224 188 aa11.94□□□□□ -0.5
HMGA1P1-201ENST00000415560 PSPNO60542 156 aa11.94□□□□□ -0.5
HMGA1P1-201ENST00000415560 NDUFB6O95139 128 aa11.94□□□□□ -0.5
HMGA1P1-201ENST00000415560 FSTL3O95633 263 aa11.94□□□□□ -0.5
HMGA1P1-201ENST00000415560 RNF224P0DH78 156 aa11.94□□□□□ -0.5
HMGA1P1-201ENST00000415560 PLA2G2AP14555 144 aa11.94□□□□□ -0.5
HMGA1P1-201ENST00000415560 ECI1P42126 302 aa11.94□□□□□ -0.5
HMGA1P1-201ENST00000415560 GLP1RP43220 463 aa11.94□□□□□ -0.5
HMGA1P1-201ENST00000415560 ATXN7L3Q14CW9 347 aaPredicted RBP11.94□□□□□ -0.5
HMGA1P1-201ENST00000415560 KRBOX4Q5JUW0 171 aa11.94□□□□□ -0.5
HMGA1P1-201ENST00000415560 FAM201AQ5SY85 155 aa11.94□□□□□ -0.5
HMGA1P1-201ENST00000415560 STUMQ69YW2 141 aa11.94□□□□□ -0.5
HMGA1P1-201ENST00000415560 FAAP20Q6NZ36 180 aa11.94□□□□□ -0.5
HMGA1P1-201ENST00000415560 TRAT1Q6PIZ9 186 aa11.94□□□□□ -0.5
HMGA1P1-201ENST00000415560 IDO2Q6ZQW0 420 aa11.94□□□□□ -0.5
HMGA1P1-201ENST00000415560 OVCH2Q7RTZ1 564 aa11.94□□□□□ -0.5
HMGA1P1-201ENST00000415560 GAPTQ8N292 157 aa11.94□□□□□ -0.5
HMGA1P1-201ENST00000415560 OR4D10Q8NGI6 311 aa11.94□□□□□ -0.5
HMGA1P1-201ENST00000415560 TERB2Q8NHR7 220 aa11.94□□□□□ -0.5
HMGA1P1-201ENST00000415560 PLPPR1Q8TBJ4 325 aa11.94□□□□□ -0.5
HMGA1P1-201ENST00000415560 TIMD4Q96H15 378 aa11.94□□□□□ -0.5
HMGA1P1-201ENST00000415560 SLC6A7Q99884 636 aa11.94□□□□□ -0.5
HMGA1P1-201ENST00000415560 CLEC4MQ9H2X3 399 aaPredicted RBP11.94□□□□□ -0.5
HMGA1P1-201ENST00000415560 NCOR1P1Q9H4R4 102 aa11.94□□□□□ -0.5
HMGA1P1-201ENST00000415560 ING3Q9NXR8 418 aa11.94□□□□□ -0.5
HMGA1P1-201ENST00000415560 ZNF222Q9UK12 451 aa11.94□□□□□ -0.5
HMGA1P1-201ENST00000415560 hCG_2014768A0A024R1R8 64 aa11.93□□□□□ -0.5
HMGA1P1-201ENST00000415560 TRAV6A0A075B6T7 132 aa11.93□□□□□ -0.5
HMGA1P1-201ENST00000415560 TMEM82A0PJX8 343 aa11.93□□□□□ -0.5
HMGA1P1-201ENST00000415560 K7N7A8 449 aa11.93□□□□□ -0.5
HMGA1P1-201ENST00000415560 GYPAP02724 150 aa11.93□□□□□ -0.5
HMGA1P1-201ENST00000415560 TK1P04183 234 aa11.93□□□□□ -0.5
HMGA1P1-201ENST00000415560 ZNF735P0CB33 412 aa11.93□□□□□ -0.5
HMGA1P1-201ENST00000415560 OR5H8P0DN80 308 aa11.93□□□□□ -0.5
HMGA1P1-201ENST00000415560 COL8A2P25067 703 aa11.93□□□□□ -0.5
HMGA1P1-201ENST00000415560 OR3A1P47881 315 aa11.93□□□□□ -0.5
HMGA1P1-201ENST00000415560 IL13RA1P78552 427 aa11.93□□□□□ -0.5
HMGA1P1-201ENST00000415560 PAX5Q02548 391 aa11.93□□□□□ -0.5
HMGA1P1-201ENST00000415560 C6orf183Q5T699 404 aa11.93□□□□□ -0.5
HMGA1P1-201ENST00000415560 ZNF880Q6PDB4 577 aa11.93□□□□□ -0.5
HMGA1P1-201ENST00000415560 ZNF788Q6ZQV5 615 aa11.93□□□□□ -0.5
HMGA1P1-201ENST00000415560 C17orf107Q6ZR85 190 aa11.93□□□□□ -0.5
HMGA1P1-201ENST00000415560 MUC20Q8N307 709 aaPredicted RBP11.93□□□□□ -0.5
HMGA1P1-201ENST00000415560 OR4A4PQ8NGN8 299 aa11.93□□□□□ -0.5
HMGA1P1-201ENST00000415560 RAB1CQ92928 201 aa11.93□□□□□ -0.5
HMGA1P1-201ENST00000415560 RAB9BQ9NP90 201 aa11.93□□□□□ -0.5
HMGA1P1-201ENST00000415560 NUDT15Q9NV35 164 aa11.93□□□□□ -0.5
HMGA1P1-201ENST00000415560 MEIKINA0A087WXM9 373 aa11.92□□□□□ -0.5
HMGA1P1-201ENST00000415560 A0A1B0GVG6 124 aa11.92□□□□□ -0.5
HMGA1P1-201ENST00000415560 A0A1W2PPR1 153 aa11.92□□□□□ -0.5
HMGA1P1-201ENST00000415560 CLEC18AA5D8T8 446 aa11.92□□□□□ -0.5
HMGA1P1-201ENST00000415560 SIGLEC5O15389 551 aa11.92□□□□□ -0.5
HMGA1P1-201ENST00000415560 FABP7O15540 132 aa11.92□□□□□ -0.5
HMGA1P1-201ENST00000415560 PRAF2O60831 178 aa11.92□□□□□ -0.5
HMGA1P1-201ENST00000415560 ZNF737O75373 536 aa11.92□□□□□ -0.5
HMGA1P1-201ENST00000415560 ZNF205O95201 554 aa11.92□□□□□ -0.5
HMGA1P1-201ENST00000415560 F12P00748 615 aaPredicted RBP11.92□□□□□ -0.5
HMGA1P1-201ENST00000415560 GSTT2P0CG29 244 aa11.92□□□□□ -0.5
HMGA1P1-201ENST00000415560 DAOP14920 347 aa11.92□□□□□ -0.5
HMGA1P1-201ENST00000415560 GZMHP20718 246 aa11.92□□□□□ -0.5
HMGA1P1-201ENST00000415560 ERP29P30040 261 aaKnown RBP11.92□□□□□ -0.5
HMGA1P1-201ENST00000415560 SEC61A1P61619 476 aaKnown RBP11.92□□□□□ -0.5
HMGA1P1-201ENST00000415560 HLA-DRB3P79483 266 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms