RNA–Protein interactions for RNA: ENST00000411809.6

CLINT1-201, Transcript of clathrin interactor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLINT1, Length 3,440 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-201ENST00000411809 CYB561D1Q8N8Q1 229 aa11.25□□□□□ -0.61
CLINT1-201ENST00000411809 OR5T1Q8NG75 326 aa11.25□□□□□ -0.61
CLINT1-201ENST00000411809 AK3Q9UIJ7 227 aa11.25□□□□□ -0.61
CLINT1-201ENST00000411809 TUBD1Q9UJT1 453 aa11.25□□□□□ -0.61
CLINT1-201ENST00000411809 DMRT1Q9Y5R6 373 aa11.25□□□□□ -0.61
CLINT1-201ENST00000411809 SERPINE3A8MV23 424 aa11.24□□□□□ -0.61
CLINT1-201ENST00000411809 C9J4A7 227 aa11.24□□□□□ -0.61
CLINT1-201ENST00000411809 ST8SIA3O43173 380 aa11.24□□□□□ -0.61
CLINT1-201ENST00000411809 GPR137BO60478 399 aa11.24□□□□□ -0.61
CLINT1-201ENST00000411809 RFPL3SP0C7P2 107 aa11.24□□□□□ -0.61
CLINT1-201ENST00000411809 HOXA5P20719 270 aa11.24□□□□□ -0.61
CLINT1-201ENST00000411809 CCNOP22674 350 aa11.24□□□□□ -0.61
CLINT1-201ENST00000411809 FOLR3P41439 243 aa11.24□□□□□ -0.61
CLINT1-201ENST00000411809 DLK1P80370 383 aa11.24□□□□□ -0.61
CLINT1-201ENST00000411809 DAZAP2Q15038 168 aaPredicted RBP11.24□□□□□ -0.61
CLINT1-201ENST00000411809 SLC22A25Q6T423 547 aa11.24□□□□□ -0.61
CLINT1-201ENST00000411809 PP6455Q8WZ26 134 aa11.24□□□□□ -0.61
CLINT1-201ENST00000411809 HAS2Q92819 552 aa11.24□□□□□ -0.61
CLINT1-201ENST00000411809 DECR2Q9NUI1 292 aa11.24□□□□□ -0.61
CLINT1-201ENST00000411809 TCFL5Q9UL49 500 aa11.24□□□□□ -0.61
CLINT1-201ENST00000411809 IGHV3-64DA0A0J9YX35 117 aa11.24□□□□□ -0.61
CLINT1-201ENST00000411809 TLX3O43711 291 aaPredicted RBP11.24□□□□□ -0.61
CLINT1-201ENST00000411809 GATCO43716 136 aaKnown RBP11.24□□□□□ -0.61
CLINT1-201ENST00000411809 ATP6V0CP27449 155 aa11.24□□□□□ -0.61
CLINT1-201ENST00000411809 RND3P61587 244 aa11.24□□□□□ -0.61
CLINT1-201ENST00000411809 GAMTQ14353 236 aa11.24□□□□□ -0.61
CLINT1-201ENST00000411809 RSU1Q15404 277 aa11.24□□□□□ -0.61
CLINT1-201ENST00000411809 NEK7Q8TDX7 302 aa11.24□□□□□ -0.61
CLINT1-201ENST00000411809 KCNE4Q8WWG9 221 aa11.24□□□□□ -0.61
CLINT1-201ENST00000411809 RBM24Q9BX46 236 aaKnown RBP11.24□□□□□ -0.61
CLINT1-201ENST00000411809 SLC2A9Q9NRM0 540 aa11.24□□□□□ -0.61
CLINT1-201ENST00000411809 PINLYPA6NC86 204 aa11.23□□□□□ -0.61
CLINT1-201ENST00000411809 RBFOX3A6NFN3 312 aa11.23□□□□□ -0.61
CLINT1-201ENST00000411809 ZNF724A8MTY0 619 aa11.23□□□□□ -0.61
CLINT1-201ENST00000411809 CST2P09228 141 aa11.23□□□□□ -0.61
CLINT1-201ENST00000411809 CDX1P47902 265 aaPredicted RBP11.23□□□□□ -0.61
CLINT1-201ENST00000411809 GNMTQ14749 295 aa11.23□□□□□ -0.61
CLINT1-201ENST00000411809 SPIN3Q5JUX0 258 aa11.23□□□□□ -0.61
CLINT1-201ENST00000411809 NAA60Q9H7X0 242 aa11.23□□□□□ -0.61
CLINT1-201ENST00000411809 TREM2Q9NZC2 230 aa11.23□□□□□ -0.61
CLINT1-201ENST00000411809 SSSCA1O60232 199 aa11.23□□□□□ -0.61
CLINT1-201ENST00000411809 TMEM187Q14656 261 aa11.23□□□□□ -0.61
CLINT1-201ENST00000411809 PPA1Q15181 289 aa11.23□□□□□ -0.61
CLINT1-201ENST00000411809 SURF2Q15527 256 aaPredicted RBP11.23□□□□□ -0.61
CLINT1-201ENST00000411809 PIGYQ3MUY2 71 aa11.23□□□□□ -0.61
CLINT1-201ENST00000411809 RAET1LQ5VY80 246 aa11.23□□□□□ -0.61
CLINT1-201ENST00000411809 SSX9Q7RTT3 188 aa11.23□□□□□ -0.61
CLINT1-201ENST00000411809 ZNF429Q86V71 674 aa11.23□□□□□ -0.61
CLINT1-201ENST00000411809 ZNF610Q8N9Z0 462 aa11.23□□□□□ -0.61
CLINT1-201ENST00000411809 MUCL1Q96DR8 90 aa11.23□□□□□ -0.61
CLINT1-201ENST00000411809 SOD3P08294 240 aa11.23□□□□□ -0.61
CLINT1-201ENST00000411809 EWSR1Q01844 656 aaKnown RBP eCLIP11.23□□□□□ -0.61
CLINT1-201ENST00000411809 SLC35G3Q8N808 338 aa11.23□□□□□ -0.61
CLINT1-201ENST00000411809 SLC39A7Q92504 469 aa11.23□□□□□ -0.61
CLINT1-201ENST00000411809 GINS3Q9BRX5 216 aa11.23□□□□□ -0.61
CLINT1-201ENST00000411809 SUCNR1Q9BXA5 334 aa11.23□□□□□ -0.61
CLINT1-201ENST00000411809 TMEM38BQ9NVV0 291 aa11.23□□□□□ -0.61
CLINT1-201ENST00000411809 PLEK2Q9NYT0 353 aa11.23□□□□□ -0.61
CLINT1-201ENST00000411809 DKKL1Q9UK85 242 aa11.23□□□□□ -0.61
CLINT1-201ENST00000411809 IGKV1-27A0A075B6S5 117 aa11.22□□□□□ -0.61
CLINT1-201ENST00000411809 NKX2-6A6NCS4 301 aa11.22□□□□□ -0.61
CLINT1-201ENST00000411809 H3BP45 60 aa11.22□□□□□ -0.61
CLINT1-201ENST00000411809 LAMTOR5O43504 91 aa11.22□□□□□ -0.61
CLINT1-201ENST00000411809 HIST1H2BKO60814 126 aa11.22□□□□□ -0.61
CLINT1-201ENST00000411809 HIST1H2BJP06899 126 aa11.22□□□□□ -0.61
CLINT1-201ENST00000411809 TUBG1P23258 451 aa11.22□□□□□ -0.61
CLINT1-201ENST00000411809 HIST1H2BOP23527 126 aa11.22□□□□□ -0.61
CLINT1-201ENST00000411809 HIST1H2BBP33778 126 aa11.22□□□□□ -0.61
CLINT1-201ENST00000411809 HIST1H2BDP58876 126 aa11.22□□□□□ -0.61
CLINT1-201ENST00000411809 HIST1H2BCP62807 126 aa11.22□□□□□ -0.61
CLINT1-201ENST00000411809 HIST2H2BEQ16778 126 aa11.22□□□□□ -0.61
CLINT1-201ENST00000411809 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.22□□□□□ -0.61
CLINT1-201ENST00000411809 OR2T2Q6IF00 324 aa11.22□□□□□ -0.61
CLINT1-201ENST00000411809 RNASE11Q8TAA1 199 aaKnown RBP11.22□□□□□ -0.61
CLINT1-201ENST00000411809 HIST1H2BHQ93079 126 aa11.22□□□□□ -0.61
CLINT1-201ENST00000411809 HIST1H2BNQ99877 126 aa11.22□□□□□ -0.61
CLINT1-201ENST00000411809 HIST1H2BMQ99879 126 aa11.22□□□□□ -0.61
CLINT1-201ENST00000411809 TNRC6AQ8NDV7 1962 aaKnown RBP11.22□□□□□ -0.61
CLINT1-201ENST00000411809 DOCK10Q96BY6 2186 aa11.22□□□□□ -0.61
CLINT1-201ENST00000411809 A0A1W2PR80 420 aa11.22□□□□□ -0.61
CLINT1-201ENST00000411809 GEMIN2O14893 280 aaKnown RBP11.22□□□□□ -0.61
CLINT1-201ENST00000411809 PPP1R2P9O14990 202 aa11.22□□□□□ -0.61
CLINT1-201ENST00000411809 DUSP1P28562 367 aa11.22□□□□□ -0.61
CLINT1-201ENST00000411809 RPS18P62269 152 aaKnown RBP11.22□□□□□ -0.61
CLINT1-201ENST00000411809 NKX6-1P78426 367 aaPredicted RBP11.22□□□□□ -0.61
CLINT1-201ENST00000411809 RAB35Q15286 201 aa11.22□□□□□ -0.61
CLINT1-201ENST00000411809 ZNF100Q8IYN0 542 aa11.22□□□□□ -0.61
CLINT1-201ENST00000411809 TMEM105Q8N8V8 129 aa11.22□□□□□ -0.61
CLINT1-201ENST00000411809 CT55Q8WUE5 264 aa11.22□□□□□ -0.61
CLINT1-201ENST00000411809 HPSE2Q8WWQ2 592 aa11.22□□□□□ -0.61
CLINT1-201ENST00000411809 SMOC1Q9H4F8 434 aa11.22□□□□□ -0.61
CLINT1-201ENST00000411809 GFOD1Q9NXC2 390 aa11.22□□□□□ -0.61
CLINT1-201ENST00000411809 GJE1A6NN92 205 aa11.22□□□□□ -0.61
CLINT1-201ENST00000411809 F10P00742 488 aa11.22□□□□□ -0.61
CLINT1-201ENST00000411809 PATE4P0C8F1 98 aa11.22□□□□□ -0.61
CLINT1-201ENST00000411809 SSPNQ14714 243 aa11.22□□□□□ -0.61
CLINT1-201ENST00000411809 FAM189A2Q15884 450 aa11.22□□□□□ -0.61
CLINT1-201ENST00000411809 COMMD1Q8N668 190 aa11.22□□□□□ -0.61
CLINT1-201ENST00000411809 CPT1CQ8TCG5 803 aa11.22□□□□□ -0.61
CLINT1-201ENST00000411809 Q96M66 194 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms