RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 SLC35E3Q7Z769 313 aa13.2□□□□□ -0.3
MRPL55-220ENST00000411464 FOXRED2Q8IWF2 684 aa13.2□□□□□ -0.3
MRPL55-220ENST00000411464 OR5D18Q8NGL1 313 aa13.2□□□□□ -0.3
MRPL55-220ENST00000411464 KIRREL1Q96J84 757 aa13.2□□□□□ -0.3
MRPL55-220ENST00000411464 SPACA5Q96QH8 159 aa13.2□□□□□ -0.3
MRPL55-220ENST00000411464 ATP5HO75947 161 aa13.19□□□□□ -0.3
MRPL55-220ENST00000411464 IGHV3-7P01780 117 aa13.19□□□□□ -0.3
MRPL55-220ENST00000411464 ISG15P05161 165 aa13.19□□□□□ -0.3
MRPL55-220ENST00000411464 TMED1Q13445 227 aa13.19□□□□□ -0.3
MRPL55-220ENST00000411464 DNAL1Q4LDG9 190 aa13.19□□□□□ -0.3
MRPL55-220ENST00000411464 Q6P435 159 aa13.19□□□□□ -0.3
MRPL55-220ENST00000411464 SAXO1Q8IYX7 474 aa13.19□□□□□ -0.3
MRPL55-220ENST00000411464 OR2G2Q8NGZ5 317 aa13.19□□□□□ -0.3
MRPL55-220ENST00000411464 HAVCR2Q8TDQ0 301 aa13.19□□□□□ -0.3
MRPL55-220ENST00000411464 RFKQ969G6 155 aa13.19□□□□□ -0.3
MRPL55-220ENST00000411464 DUX3Q96PT4 197 aa13.19□□□□□ -0.3
MRPL55-220ENST00000411464 PPIL3Q9H2H8 161 aaKnown RBP13.19□□□□□ -0.3
MRPL55-220ENST00000411464 FRRS1LQ9P0K9 344 aa13.19□□□□□ -0.3
MRPL55-220ENST00000411464 POMPQ9Y244 141 aa13.19□□□□□ -0.3
MRPL55-220ENST00000411464 MEIKINA0A087WXM9 373 aa13.18□□□□□ -0.3
MRPL55-220ENST00000411464 CCL24O00175 119 aa13.18□□□□□ -0.3
MRPL55-220ENST00000411464 IGHG2P01859 326 aa13.18□□□□□ -0.3
MRPL55-220ENST00000411464 MT-ND2P03891 347 aa13.18□□□□□ -0.3
MRPL55-220ENST00000411464 TMEM225BP0DP42 221 aa13.18□□□□□ -0.3
MRPL55-220ENST00000411464 C21orf33P30042 268 aaPredicted RBP13.18□□□□□ -0.3
MRPL55-220ENST00000411464 GLP1RP43220 463 aa13.18□□□□□ -0.3
MRPL55-220ENST00000411464 RAB7AP51149 207 aa13.18□□□□□ -0.3
MRPL55-220ENST00000411464 ISL1P61371 349 aa13.18□□□□□ -0.3
MRPL55-220ENST00000411464 ZNF85Q03923 595 aa13.18□□□□□ -0.3
MRPL55-220ENST00000411464 KDM4DQ6B0I6 523 aa13.18□□□□□ -0.3
MRPL55-220ENST00000411464 TEX38Q6PEX7 206 aa13.18□□□□□ -0.3
MRPL55-220ENST00000411464 KCTD20Q7Z5Y7 419 aa13.18□□□□□ -0.3
MRPL55-220ENST00000411464 OR8H3Q8N146 312 aa13.18□□□□□ -0.3
MRPL55-220ENST00000411464 STPG2Q8N412 459 aa13.18□□□□□ -0.3
MRPL55-220ENST00000411464 OR13C3Q8NGS6 347 aa13.18□□□□□ -0.3
MRPL55-220ENST00000411464 LEAP2Q969E1 77 aa13.18□□□□□ -0.3
MRPL55-220ENST00000411464 MBOAT4Q96T53 435 aa13.18□□□□□ -0.3
MRPL55-220ENST00000411464 CALYQ9NYX4 217 aa13.18□□□□□ -0.3
MRPL55-220ENST00000411464 A0A1W2PPI3 338 aa13.17□□□□□ -0.3
MRPL55-220ENST00000411464 HSPB6O14558 160 aa13.17□□□□□ -0.3
MRPL55-220ENST00000411464 ZFPL1O95159 310 aa13.17□□□□□ -0.3
MRPL55-220ENST00000411464 IGKV1D-33P01593 117 aa13.17□□□□□ -0.3
MRPL55-220ENST00000411464 IGKV1-33P01594 117 aa13.17□□□□□ -0.3
MRPL55-220ENST00000411464 CGB3P0DN86 165 aa13.17□□□□□ -0.3
MRPL55-220ENST00000411464 CGB7P0DN87 165 aa13.17□□□□□ -0.3
MRPL55-220ENST00000411464 RASSF2P50749 326 aa13.17□□□□□ -0.3
MRPL55-220ENST00000411464 KLHL22Q53GT1 634 aa13.17□□□□□ -0.3
MRPL55-220ENST00000411464 ZDHHC13Q8IUH4 622 aa13.17□□□□□ -0.3
MRPL55-220ENST00000411464 OR51T1Q8NGJ9 327 aa13.17□□□□□ -0.3
MRPL55-220ENST00000411464 OR8J1Q8NGP2 316 aa13.17□□□□□ -0.3
MRPL55-220ENST00000411464 OR13C9Q8NGT0 318 aa13.17□□□□□ -0.3
MRPL55-220ENST00000411464 RNF166Q96A37 237 aaPredicted RBP13.17□□□□□ -0.3
MRPL55-220ENST00000411464 RAX2Q96IS3 184 aa13.17□□□□□ -0.3
MRPL55-220ENST00000411464 BARHL1Q9BZE3 327 aa13.17□□□□□ -0.3
MRPL55-220ENST00000411464 IDI2-AS1Q9NZ38 188 aa13.17□□□□□ -0.3
MRPL55-220ENST00000411464 PSG11Q9UQ72 335 aa13.17□□□□□ -0.3
MRPL55-220ENST00000411464 LSM4Q9Y4Z0 139 aaKnown RBP13.17□□□□□ -0.3
MRPL55-220ENST00000411464 DSCAML1Q8TD84 2053 aa13.17□□□□□ -0.3
MRPL55-220ENST00000411464 NCBP2LA6PVI3 153 aaKnown RBP13.16□□□□□ -0.3
MRPL55-220ENST00000411464 H0YJX3 145 aa13.16□□□□□ -0.3
MRPL55-220ENST00000411464 C3orf84H3BNL1 204 aa13.16□□□□□ -0.3
MRPL55-220ENST00000411464 DBTP11182 482 aaKnown RBP13.16□□□□□ -0.3
MRPL55-220ENST00000411464 LUMP51884 338 aaPredicted RBP13.16□□□□□ -0.3
MRPL55-220ENST00000411464 DIAPH2-AS1Q14236 149 aa13.16□□□□□ -0.3
MRPL55-220ENST00000411464 CDK5R1Q15078 307 aa13.16□□□□□ -0.3
MRPL55-220ENST00000411464 ATP6AP1Q15904 470 aa13.16□□□□□ -0.3
MRPL55-220ENST00000411464 LTC4SQ16873 150 aa13.16□□□□□ -0.3
MRPL55-220ENST00000411464 PNLIPRP3Q17RR3 467 aa13.16□□□□□ -0.3
MRPL55-220ENST00000411464 PAN3Q58A45 887 aaKnown RBP13.16□□□□□ -0.3
MRPL55-220ENST00000411464 C9orf66Q5T8R8 295 aa13.16□□□□□ -0.3
MRPL55-220ENST00000411464 FDX2Q6P4F2 183 aa13.16□□□□□ -0.3
MRPL55-220ENST00000411464 SLC16A12Q6ZSM3 486 aa13.16□□□□□ -0.3
MRPL55-220ENST00000411464 OR5M8Q8NGP6 311 aa13.16□□□□□ -0.3
MRPL55-220ENST00000411464 OR13A1Q8NGR1 328 aa13.16□□□□□ -0.3
MRPL55-220ENST00000411464 OR10X1Q8NGY0 326 aa13.16□□□□□ -0.3
MRPL55-220ENST00000411464 OR8U1Q8NH10 309 aa13.16□□□□□ -0.3
MRPL55-220ENST00000411464 EME1Q96AY2 570 aa13.16□□□□□ -0.3
MRPL55-220ENST00000411464 NR1H4Q96RI1 486 aaPredicted RBP13.16□□□□□ -0.3
MRPL55-220ENST00000411464 OSBPL10Q9BXB5 764 aa13.16□□□□□ -0.3
MRPL55-220ENST00000411464 GON7Q9BXV9 100 aa13.16□□□□□ -0.3
MRPL55-220ENST00000411464 NCOR1P1Q9H4R4 102 aa13.16□□□□□ -0.3
MRPL55-220ENST00000411464 ZCCHC4Q9H5U6 513 aa13.16□□□□□ -0.3
MRPL55-220ENST00000411464 DCLRE1BQ9H816 532 aa13.16□□□□□ -0.3
MRPL55-220ENST00000411464 KIF25Q9UIL4 384 aa13.16□□□□□ -0.3
MRPL55-220ENST00000411464 DNAH9Q9NYC9 4486 aa13.15□□□□□ -0.3
MRPL55-220ENST00000411464 DAPL1A0PJW8 107 aa13.15□□□□□ -0.3
MRPL55-220ENST00000411464 AP4M1O00189 453 aa13.15□□□□□ -0.3
MRPL55-220ENST00000411464 IL1AP01583 271 aa13.15□□□□□ -0.3
MRPL55-220ENST00000411464 HCKP08631 526 aa13.15□□□□□ -0.3
MRPL55-220ENST00000411464 HTR1AP08908 422 aa13.15□□□□□ -0.3
MRPL55-220ENST00000411464 POLR2IP36954 125 aaKnown RBP13.15□□□□□ -0.3
MRPL55-220ENST00000411464 GNG10P50151 68 aa13.15□□□□□ -0.3
MRPL55-220ENST00000411464 CCR9P51686 369 aa13.15□□□□□ -0.3
MRPL55-220ENST00000411464 NANOS3P60323 173 aaKnown RBP13.15□□□□□ -0.3
MRPL55-220ENST00000411464 ZSCAN26Q16670 478 aa13.15□□□□□ -0.3
MRPL55-220ENST00000411464 CXorf66Q5JRM2 361 aaPredicted RBP13.15□□□□□ -0.3
MRPL55-220ENST00000411464 MOB3BQ86TA1 216 aa13.15□□□□□ -0.3
MRPL55-220ENST00000411464 OR51A4Q8NGJ6 313 aa13.15□□□□□ -0.3
MRPL55-220ENST00000411464 RFESDQ8TAC1 157 aa13.15□□□□□ -0.3
MRPL55-220ENST00000411464 PRR25Q96S07 402 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms