RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 TCF23Q7RTU1 214 aa8.93□□□□□ -0.98
CHMP3-205ENST00000409810 LYPD6Q86Y78 171 aa8.93□□□□□ -0.98
CHMP3-205ENST00000409810 TPRX1Q8N7U7 411 aa8.93□□□□□ -0.98
CHMP3-205ENST00000409810 OR6M1Q8NGM8 313 aa8.93□□□□□ -0.98
CHMP3-205ENST00000409810 OR13D1Q8NGV5 346 aa8.93□□□□□ -0.98
CHMP3-205ENST00000409810 NEK7Q8TDX7 302 aa8.93□□□□□ -0.98
CHMP3-205ENST00000409810 ZNF48Q96MX3 618 aaPredicted RBP8.93□□□□□ -0.98
CHMP3-205ENST00000409810 DPCDQ9BVM2 203 aaPredicted RBP8.93□□□□□ -0.98
CHMP3-205ENST00000409810 NCOR1P1Q9H4R4 102 aa8.93□□□□□ -0.98
CHMP3-205ENST00000409810 PLGRKTQ9HBL7 147 aa8.93□□□□□ -0.98
CHMP3-205ENST00000409810 TAS2R3Q9NYW6 316 aa8.93□□□□□ -0.98
CHMP3-205ENST00000409810 A0A1W2PP11 408 aa8.92□□□□□ -0.98
CHMP3-205ENST00000409810 ODAMA1E959 279 aa8.92□□□□□ -0.98
CHMP3-205ENST00000409810 MEIOCA2RUB1 952 aa8.92□□□□□ -0.98
CHMP3-205ENST00000409810 DNAJC9-AS1A6NH13 148 aa8.92□□□□□ -0.98
CHMP3-205ENST00000409810 CLDN34H7C241 214 aa8.92□□□□□ -0.98
CHMP3-205ENST00000409810 BPNT1O95861 308 aa8.92□□□□□ -0.98
CHMP3-205ENST00000409810 IGHV1-8P0DP01 117 aa8.92□□□□□ -0.98
CHMP3-205ENST00000409810 GP2P55259 537 aaKnown RBP8.92□□□□□ -0.98
CHMP3-205ENST00000409810 DLX6P56179 175 aa8.92□□□□□ -0.98
CHMP3-205ENST00000409810 LGALS4P56470 323 aa8.92□□□□□ -0.98
CHMP3-205ENST00000409810 UBA52P62987 128 aaKnown RBP8.92□□□□□ -0.98
CHMP3-205ENST00000409810 PAX5Q02548 391 aa8.92□□□□□ -0.98
CHMP3-205ENST00000409810 RBM39Q14498 530 aaKnown RBP8.92□□□□□ -0.98
CHMP3-205ENST00000409810 KRTAP24-1Q3LI83 254 aa8.92□□□□□ -0.98
CHMP3-205ENST00000409810 MIDNQ504T8 468 aa8.92□□□□□ -0.98
CHMP3-205ENST00000409810 C1orf100Q5SVJ3 147 aa8.92□□□□□ -0.98
CHMP3-205ENST00000409810 OR52W1Q6IF63 320 aa8.92□□□□□ -0.98
CHMP3-205ENST00000409810 CD200R1LQ6Q8B3 271 aa8.92□□□□□ -0.98
CHMP3-205ENST00000409810 ZNF782Q6ZMW2 699 aaPredicted RBP8.92□□□□□ -0.98
CHMP3-205ENST00000409810 TMEM86BQ8N661 226 aa8.92□□□□□ -0.98
CHMP3-205ENST00000409810 ZDHHC22Q8N966 263 aa8.92□□□□□ -0.98
CHMP3-205ENST00000409810 ZNF565Q8N9K5 539 aa8.92□□□□□ -0.98
CHMP3-205ENST00000409810 SUMF2Q8NBJ7 301 aa8.92□□□□□ -0.98
CHMP3-205ENST00000409810 KCNG3Q8TAE7 436 aa8.92□□□□□ -0.98
CHMP3-205ENST00000409810 CORO2AQ92828 525 aa8.92□□□□□ -0.98
CHMP3-205ENST00000409810 SLC25A28Q96A46 364 aa8.92□□□□□ -0.98
CHMP3-205ENST00000409810 COQ2Q96H96 371 aa8.92□□□□□ -0.98
CHMP3-205ENST00000409810 TMEM59Q9BXS4 323 aa8.92□□□□□ -0.98
CHMP3-205ENST00000409810 SELENOIQ9C0D9 397 aa8.92□□□□□ -0.98
CHMP3-205ENST00000409810 PPIL3Q9H2H8 161 aaKnown RBP8.92□□□□□ -0.98
CHMP3-205ENST00000409810 PRDM13Q9H4Q3 707 aa8.92□□□□□ -0.98
CHMP3-205ENST00000409810 BANF2Q9H503 90 aa8.92□□□□□ -0.98
CHMP3-205ENST00000409810 ING3Q9NXR8 418 aa8.92□□□□□ -0.98
CHMP3-205ENST00000409810 STUB1Q9UNE7 303 aa8.92□□□□□ -0.98
CHMP3-205ENST00000409810 AK6Q9Y3D8 172 aaKnown RBP8.92□□□□□ -0.98
CHMP3-205ENST00000409810 SESN1Q9Y6P5 492 aa8.92□□□□□ -0.98
CHMP3-205ENST00000409810 A0A087WXM4 84 aa8.91□□□□□ -0.98
CHMP3-205ENST00000409810 MEIKINA0A087WXM9 373 aa8.91□□□□□ -0.98
CHMP3-205ENST00000409810 TRAV1-2A0A0B4J238 106 aa8.91□□□□□ -0.98
CHMP3-205ENST00000409810 MDFIC2A0A1B0GVS7 189 aa8.91□□□□□ -0.98
CHMP3-205ENST00000409810 TMEM30CPA0ZSE6 113 aa8.91□□□□□ -0.98
CHMP3-205ENST00000409810 BTBD17A6NE02 478 aa8.91□□□□□ -0.98
CHMP3-205ENST00000409810 ZNF729A6NN14 1252 aaPredicted RBP8.91□□□□□ -0.98
CHMP3-205ENST00000409810 MCRIP1C9JLW8 97 aa8.91□□□□□ -0.98
CHMP3-205ENST00000409810 SLC17A2O00624 439 aa8.91□□□□□ -0.98
CHMP3-205ENST00000409810 SLC22A1O15245 554 aa8.91□□□□□ -0.98
CHMP3-205ENST00000409810 MPIG6BO95866 241 aa8.91□□□□□ -0.98
CHMP3-205ENST00000409810 COX7A1P24310 79 aa8.91□□□□□ -0.98
CHMP3-205ENST00000409810 SAA4P35542 130 aa8.91□□□□□ -0.98
CHMP3-205ENST00000409810 GLP1RP43220 463 aa8.91□□□□□ -0.98
CHMP3-205ENST00000409810 GLIPR1P48060 266 aa8.91□□□□□ -0.98
CHMP3-205ENST00000409810 DLX1P56177 255 aa8.91□□□□□ -0.98
CHMP3-205ENST00000409810 SRSF2Q01130 221 aaKnown RBP8.91□□□□□ -0.98
CHMP3-205ENST00000409810 NEDD8Q15843 81 aa8.91□□□□□ -0.98
CHMP3-205ENST00000409810 RAB11BQ15907 218 aa8.91□□□□□ -0.98
CHMP3-205ENST00000409810 SYT6Q5T7P8 510 aaPredicted RBP8.91□□□□□ -0.98
CHMP3-205ENST00000409810 RSBN1Q5VWQ0 802 aaPredicted RBP8.91□□□□□ -0.98
CHMP3-205ENST00000409810 SLC35E4Q6ICL7 350 aa8.91□□□□□ -0.98
CHMP3-205ENST00000409810 Q6YL49 198 aa8.91□□□□□ -0.98
CHMP3-205ENST00000409810 LDLRAD3Q86YD5 345 aa8.91□□□□□ -0.98
CHMP3-205ENST00000409810 PIP4P2Q8N4L2 257 aa8.91□□□□□ -0.98
CHMP3-205ENST00000409810 C11orf42Q8N5U0 333 aa8.91□□□□□ -0.98
CHMP3-205ENST00000409810 FAM216AQ8WUB2 273 aa8.91□□□□□ -0.98
CHMP3-205ENST00000409810 SSMEM1Q8WWF3 244 aa8.91□□□□□ -0.98
CHMP3-205ENST00000409810 FAM46BQ96A09 425 aa8.91□□□□□ -0.98
CHMP3-205ENST00000409810 Q96M66 194 aa8.91□□□□□ -0.98
CHMP3-205ENST00000409810 C1orf147Q96MC9 270 aaPredicted RBP8.91□□□□□ -0.98
CHMP3-205ENST00000409810 C19orf24Q9BVV8 132 aa8.91□□□□□ -0.98
CHMP3-205ENST00000409810 DPAGT1Q9H3H5 408 aa8.91□□□□□ -0.98
CHMP3-205ENST00000409810 ESM1Q9NQ30 184 aa8.91□□□□□ -0.98
CHMP3-205ENST00000409810 RCC2Q9P258 522 aaKnown RBP8.91□□□□□ -0.98
CHMP3-205ENST00000409810 SSR3Q9UNL2 185 aa8.91□□□□□ -0.98
CHMP3-205ENST00000409810 POMT1Q9Y6A1 747 aa8.91□□□□□ -0.98
CHMP3-205ENST00000409810 V9GY05 133 aa8.91□□□□□ -0.98
CHMP3-205ENST00000409810 COL6A5A8TX70 2615 aa8.9□□□□□ -0.98
CHMP3-205ENST00000409810 A0A0U1RQK1 487 aa8.9□□□□□ -0.98
CHMP3-205ENST00000409810 A0A1W2PRD5 423 aa8.9□□□□□ -0.98
CHMP3-205ENST00000409810 A0A1W2PRF3 423 aa8.9□□□□□ -0.98
CHMP3-205ENST00000409810 A0A1W2PRM7 423 aa8.9□□□□□ -0.98
CHMP3-205ENST00000409810 MEX3AA1L020 520 aaKnown RBP8.9□□□□□ -0.98
CHMP3-205ENST00000409810 ARG1P05089 322 aa8.9□□□□□ -0.98
CHMP3-205ENST00000409810 GLAP06280 429 aa8.9□□□□□ -0.98
CHMP3-205ENST00000409810 MELTFP08582 738 aa8.9□□□□□ -0.98
CHMP3-205ENST00000409810 CD37P11049 281 aa8.9□□□□□ -0.98
CHMP3-205ENST00000409810 ARSBP15848 533 aa8.9□□□□□ -0.98
CHMP3-205ENST00000409810 ACTG1P63261 375 aa8.9□□□□□ -0.98
CHMP3-205ENST00000409810 PRB3Q04118 309 aaPredicted RBP8.9□□□□□ -0.98
CHMP3-205ENST00000409810 SLC9A3R2Q15599 337 aa8.9□□□□□ -0.98
CHMP3-205ENST00000409810 C22orf42Q6IC83 251 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms