RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 AMBNQ9NP70 447 aa11.8□□□□□ -0.52
CBX3-203ENST00000409747 ING3Q9NXR8 418 aa11.8□□□□□ -0.52
CBX3-203ENST00000409747 ADARB2-AS1A8MUL3 147 aa11.79□□□□□ -0.52
CBX3-203ENST00000409747 CD24P25063 80 aa11.79□□□□□ -0.52
CBX3-203ENST00000409747 C21orf33P30042 268 aaPredicted RBP11.79□□□□□ -0.52
CBX3-203ENST00000409747 GDNFP39905 211 aa11.79□□□□□ -0.52
CBX3-203ENST00000409747 GLP1RP43220 463 aa11.79□□□□□ -0.52
CBX3-203ENST00000409747 RBM39Q14498 530 aaKnown RBP11.79□□□□□ -0.52
CBX3-203ENST00000409747 C17orf58Q2M2W7 97 aa11.79□□□□□ -0.52
CBX3-203ENST00000409747 FBLN7Q53RD9 439 aa11.79□□□□□ -0.52
CBX3-203ENST00000409747 LPCAT4Q643R3 524 aa11.79□□□□□ -0.52
CBX3-203ENST00000409747 CENPVQ7Z7K6 275 aaPredicted RBP11.79□□□□□ -0.52
CBX3-203ENST00000409747 CNIH3Q8TBE1 160 aa11.79□□□□□ -0.52
CBX3-203ENST00000409747 GPR148Q8TDV2 347 aa11.79□□□□□ -0.52
CBX3-203ENST00000409747 TNFAIP8L1Q8WVP5 186 aa11.79□□□□□ -0.52
CBX3-203ENST00000409747 ZNF649Q9BS31 505 aa11.79□□□□□ -0.52
CBX3-203ENST00000409747 JAM3Q9BX67 310 aa11.79□□□□□ -0.52
CBX3-203ENST00000409747 FAM192AQ9GZU8 254 aa11.79□□□□□ -0.52
CBX3-203ENST00000409747 MEIKINA0A087WXM9 373 aa11.78□□□□□ -0.52
CBX3-203ENST00000409747 E9PI62 339 aa11.78□□□□□ -0.52
CBX3-203ENST00000409747 HSPB6O14558 160 aa11.78□□□□□ -0.52
CBX3-203ENST00000409747 FAM106CPP0CH98 169 aa11.78□□□□□ -0.52
CBX3-203ENST00000409747 PF4V1P10720 104 aa11.78□□□□□ -0.52
CBX3-203ENST00000409747 NFYBP25208 207 aa11.78□□□□□ -0.52
CBX3-203ENST00000409747 OR3A4PP47883 348 aa11.78□□□□□ -0.52
CBX3-203ENST00000409747 CD83Q01151 205 aa11.78□□□□□ -0.52
CBX3-203ENST00000409747 PAX5Q02548 391 aa11.78□□□□□ -0.52
CBX3-203ENST00000409747 RSU1Q15404 277 aa11.78□□□□□ -0.52
CBX3-203ENST00000409747 CCDC58Q4VC31 144 aa11.78□□□□□ -0.52
CBX3-203ENST00000409747 ABCA11PQ4W5N1 156 aa11.78□□□□□ -0.52
CBX3-203ENST00000409747 ZNF529Q6P280 563 aa11.78□□□□□ -0.52
CBX3-203ENST00000409747 SATL1Q86VE3 508 aa11.78□□□□□ -0.52
CBX3-203ENST00000409747 PQLC1Q8N2U9 271 aa11.78□□□□□ -0.52
CBX3-203ENST00000409747 OR4X2Q8NGF9 303 aa11.78□□□□□ -0.52
CBX3-203ENST00000409747 TOMM40LQ969M1 308 aa11.78□□□□□ -0.52
CBX3-203ENST00000409747 RPEQ96AT9 228 aa11.78□□□□□ -0.52
CBX3-203ENST00000409747 KIRREL1Q96J84 757 aa11.78□□□□□ -0.52
CBX3-203ENST00000409747 RDH12Q96NR8 316 aa11.78□□□□□ -0.52
CBX3-203ENST00000409747 NR1H4Q96RI1 486 aaPredicted RBP11.78□□□□□ -0.52
CBX3-203ENST00000409747 S100A14Q9HCY8 104 aa11.78□□□□□ -0.52
CBX3-203ENST00000409747 NECAP2Q9NVZ3 263 aa11.78□□□□□ -0.52
CBX3-203ENST00000409747 FAM118AQ9NWS6 357 aa11.78□□□□□ -0.52
CBX3-203ENST00000409747 CALYQ9NYX4 217 aa11.78□□□□□ -0.52
CBX3-203ENST00000409747 KIAA2026Q5HYC2 2103 aa11.78□□□□□ -0.52
CBX3-203ENST00000409747 IRGMA1A4Y4 181 aa11.77□□□□□ -0.52
CBX3-203ENST00000409747 LY6LH3BQJ8 138 aa11.77□□□□□ -0.52
CBX3-203ENST00000409747 GABRPO00591 440 aa11.77□□□□□ -0.52
CBX3-203ENST00000409747 PIN1P1O15428 100 aa11.77□□□□□ -0.52
CBX3-203ENST00000409747 IL1AP01583 271 aa11.77□□□□□ -0.52
CBX3-203ENST00000409747 CD33P20138 364 aa11.77□□□□□ -0.52
CBX3-203ENST00000409747 PPP3R1P63098 170 aa11.77□□□□□ -0.52
CBX3-203ENST00000409747 ZSCAN26Q16670 478 aa11.77□□□□□ -0.52
CBX3-203ENST00000409747 OXLD1Q5BKU9 147 aa11.77□□□□□ -0.52
CBX3-203ENST00000409747 RPL22L1Q6P5R6 122 aaKnown RBP11.77□□□□□ -0.52
CBX3-203ENST00000409747 ZNF555Q8NEP9 628 aa11.77□□□□□ -0.52
CBX3-203ENST00000409747 SGCDQ92629 289 aa11.77□□□□□ -0.52
CBX3-203ENST00000409747 FGF20Q9NP95 211 aaPredicted RBP11.77□□□□□ -0.52
CBX3-203ENST00000409747 KIF25Q9UIL4 384 aa11.77□□□□□ -0.52
CBX3-203ENST00000409747 TSSC4Q9Y5U2 329 aaPredicted RBP11.77□□□□□ -0.52
CBX3-203ENST00000409747 TRAV24A0A0B4J272 114 aa11.77□□□□□ -0.53
CBX3-203ENST00000409747 A0A1W2PRX2 142 aa11.77□□□□□ -0.53
CBX3-203ENST00000409747 LPLP06858 475 aa11.77□□□□□ -0.53
CBX3-203ENST00000409747 LIMS3P0CW19 117 aa11.77□□□□□ -0.53
CBX3-203ENST00000409747 LIMS4P0CW20 117 aa11.77□□□□□ -0.53
CBX3-203ENST00000409747 SOX2P48431 317 aa11.77□□□□□ -0.53
CBX3-203ENST00000409747 TMPRSS11AQ6ZMR5 421 aa11.77□□□□□ -0.53
CBX3-203ENST00000409747 SLC16A12Q6ZSM3 486 aa11.77□□□□□ -0.53
CBX3-203ENST00000409747 Q8NFD4 153 aa11.77□□□□□ -0.53
CBX3-203ENST00000409747 OR10A7Q8NGE5 316 aa11.77□□□□□ -0.53
CBX3-203ENST00000409747 APH1BQ8WW43 257 aa11.77□□□□□ -0.53
CBX3-203ENST00000409747 SLC29A1Q99808 456 aa11.77□□□□□ -0.53
CBX3-203ENST00000409747 LINC00574Q9H8X3 128 aa11.77□□□□□ -0.53
CBX3-203ENST00000409747 TAS2R4Q9NYW5 299 aa11.77□□□□□ -0.53
CBX3-203ENST00000409747 IDI2-AS1Q9NZ38 188 aa11.77□□□□□ -0.53
CBX3-203ENST00000409747 MOB4Q9Y3A3 225 aa11.77□□□□□ -0.53
CBX3-203ENST00000409747 HSPE1-MOB4S4R3N1 261 aa11.77□□□□□ -0.53
CBX3-203ENST00000409747 TCRBV4S1A1TA0A5B7 111 aa11.76□□□□□ -0.53
CBX3-203ENST00000409747 J3QR06 171 aa11.76□□□□□ -0.53
CBX3-203ENST00000409747 CGB3P0DN86 165 aa11.76□□□□□ -0.53
CBX3-203ENST00000409747 CGB7P0DN87 165 aa11.76□□□□□ -0.53
CBX3-203ENST00000409747 DCKP27707 260 aa11.76□□□□□ -0.53
CBX3-203ENST00000409747 MADCAM1Q13477 382 aa11.76□□□□□ -0.53
CBX3-203ENST00000409747 LINC00596Q86U02 117 aa11.76□□□□□ -0.53
CBX3-203ENST00000409747 THNSL2Q86YJ6 484 aa11.76□□□□□ -0.53
CBX3-203ENST00000409747 OR51A2Q8NGJ7 313 aa11.76□□□□□ -0.53
CBX3-203ENST00000409747 OR13A1Q8NGR1 328 aa11.76□□□□□ -0.53
CBX3-203ENST00000409747 TMEM106AQ96A25 262 aa11.76□□□□□ -0.53
CBX3-203ENST00000409747 PHF21AQ96BD5 680 aa11.76□□□□□ -0.53
CBX3-203ENST00000409747 S100A13Q99584 98 aa11.76□□□□□ -0.53
CBX3-203ENST00000409747 TMEM138Q9NPI0 162 aa11.76□□□□□ -0.53
CBX3-203ENST00000409747 PAK1IP1Q9NWT1 392 aaPredicted RBP11.76□□□□□ -0.53
CBX3-203ENST00000409747 SMPD3Q9NY59 655 aaPredicted RBP11.76□□□□□ -0.53
CBX3-203ENST00000409747 CLIC3O95833 236 aa11.75□□□□□ -0.53
CBX3-203ENST00000409747 PF4P02776 101 aa11.75□□□□□ -0.53
CBX3-203ENST00000409747 CSTBP04080 98 aaKnown RBP11.75□□□□□ -0.53
CBX3-203ENST00000409747 MYL12AP19105 171 aa11.75□□□□□ -0.53
CBX3-203ENST00000409747 RAB7AP51149 207 aa11.75□□□□□ -0.53
CBX3-203ENST00000409747 GTF2A1P52655 376 aaPredicted RBP11.75□□□□□ -0.53
CBX3-203ENST00000409747 PIGYQ3MUY2 71 aa11.75□□□□□ -0.53
CBX3-203ENST00000409747 NHLRC3Q5JS37 347 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms