RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 IDI2-AS1Q9NZ38 188 aa12.97□□□□□ -0.33
CHMP3-203ENST00000409225 OR6C3Q9NZP0 311 aa12.97□□□□□ -0.33
CHMP3-203ENST00000409225 A0A1W2PPE3 182 aa12.96□□□□□ -0.33
CHMP3-203ENST00000409225 ZNF670-ZNF695F2Z2N8 137 aa12.96□□□□□ -0.33
CHMP3-203ENST00000409225 HSD17B6O14756 317 aa12.96□□□□□ -0.33
CHMP3-203ENST00000409225 CSN2P05814 226 aa12.96□□□□□ -0.33
CHMP3-203ENST00000409225 PSMB8P28062 276 aa12.96□□□□□ -0.33
CHMP3-203ENST00000409225 PDZK1IP1Q13113 114 aa12.96□□□□□ -0.33
CHMP3-203ENST00000409225 EBI3Q14213 229 aa12.96□□□□□ -0.33
CHMP3-203ENST00000409225 FAM98BQ52LJ0 330 aaKnown RBP12.96□□□□□ -0.33
CHMP3-203ENST00000409225 FAM53AQ6NSI3 398 aaPredicted RBP12.96□□□□□ -0.33
CHMP3-203ENST00000409225 BCDIN3DQ7Z5W3 292 aaKnown RBP12.96□□□□□ -0.33
CHMP3-203ENST00000409225 CATSPERDQ86XM0 798 aa12.96□□□□□ -0.33
CHMP3-203ENST00000409225 Q8N6K4 173 aa12.96□□□□□ -0.33
CHMP3-203ENST00000409225 YIPF7Q8N8F6 280 aa12.96□□□□□ -0.33
CHMP3-203ENST00000409225 DCUN1D4Q92564 292 aa12.96□□□□□ -0.33
CHMP3-203ENST00000409225 HSPB9Q9BQS6 159 aa12.96□□□□□ -0.33
CHMP3-203ENST00000409225 COMMD4Q9H0A8 199 aa12.96□□□□□ -0.33
CHMP3-203ENST00000409225 ZNF556Q9HAH1 456 aa12.96□□□□□ -0.33
CHMP3-203ENST00000409225 SLC25A19Q9HC21 320 aa12.96□□□□□ -0.33
CHMP3-203ENST00000409225 IGHV1-3A0A0C4DH29 117 aa12.95□□□□□ -0.34
CHMP3-203ENST00000409225 IGKV1-9A0A0C4DH69 117 aa12.95□□□□□ -0.34
CHMP3-203ENST00000409225 IGKV1-12A0A0C4DH73 117 aa12.95□□□□□ -0.34
CHMP3-203ENST00000409225 SLC33A1O00400 549 aaPredicted RBP12.95□□□□□ -0.34
CHMP3-203ENST00000409225 OVOL1O14753 267 aa12.95□□□□□ -0.34
CHMP3-203ENST00000409225 MPZL2O60487 215 aa12.95□□□□□ -0.34
CHMP3-203ENST00000409225 CST1P01037 141 aa12.95□□□□□ -0.34
CHMP3-203ENST00000409225 IGKV1D-12P01611 117 aa12.95□□□□□ -0.34
CHMP3-203ENST00000409225 CGB3P0DN86 165 aa12.95□□□□□ -0.34
CHMP3-203ENST00000409225 CGB7P0DN87 165 aa12.95□□□□□ -0.34
CHMP3-203ENST00000409225 VEGFCP49767 419 aa12.95□□□□□ -0.34
CHMP3-203ENST00000409225 GNB1P62873 340 aa12.95□□□□□ -0.34
CHMP3-203ENST00000409225 GABPB1Q06547 395 aaPredicted RBP12.95□□□□□ -0.34
CHMP3-203ENST00000409225 GK3PQ14409 553 aa12.95□□□□□ -0.34
CHMP3-203ENST00000409225 SPATS1Q496A3 300 aa12.95□□□□□ -0.34
CHMP3-203ENST00000409225 Q6P435 159 aa12.95□□□□□ -0.34
CHMP3-203ENST00000409225 DNAAF1Q8NEP3 725 aa12.95□□□□□ -0.34
CHMP3-203ENST00000409225 OR13A1Q8NGR1 328 aa12.95□□□□□ -0.34
CHMP3-203ENST00000409225 RFESDQ8TAC1 157 aa12.95□□□□□ -0.34
CHMP3-203ENST00000409225 KCTD7Q96MP8 289 aa12.95□□□□□ -0.34
CHMP3-203ENST00000409225 RASL11BQ9BPW5 248 aa12.95□□□□□ -0.34
CHMP3-203ENST00000409225 ELAC2Q9BQ52 826 aaKnown RBP12.95□□□□□ -0.34
CHMP3-203ENST00000409225 KRT84Q9NSB2 600 aa12.95□□□□□ -0.34
CHMP3-203ENST00000409225 I3L521 148 aa12.94□□□□□ -0.34
CHMP3-203ENST00000409225 HSPB6O14558 160 aa12.94□□□□□ -0.34
CHMP3-203ENST00000409225 DEGS1O15121 323 aa12.94□□□□□ -0.34
CHMP3-203ENST00000409225 IL1AP01583 271 aa12.94□□□□□ -0.34
CHMP3-203ENST00000409225 ZNF816Q0VGE8 651 aaPredicted RBP12.94□□□□□ -0.34
CHMP3-203ENST00000409225 LHFPL2Q6ZUX7 228 aa12.94□□□□□ -0.34
CHMP3-203ENST00000409225 SSX6Q7RTT6 188 aa12.94□□□□□ -0.34
CHMP3-203ENST00000409225 IZUMO1Q8IYV9 350 aa12.94□□□□□ -0.34
CHMP3-203ENST00000409225 HS3ST5Q8IZT8 346 aa12.94□□□□□ -0.34
CHMP3-203ENST00000409225 OR2T10Q8NGZ9 312 aa12.94□□□□□ -0.34
CHMP3-203ENST00000409225 PP6455Q8WZ26 134 aa12.94□□□□□ -0.34
CHMP3-203ENST00000409225 S1PR3Q99500 378 aa12.94□□□□□ -0.34
CHMP3-203ENST00000409225 MNTQ99583 582 aa12.94□□□□□ -0.34
CHMP3-203ENST00000409225 TBX5Q99593 518 aa12.94□□□□□ -0.34
CHMP3-203ENST00000409225 OSBPL10Q9BXB5 764 aa12.94□□□□□ -0.34
CHMP3-203ENST00000409225 KLK15Q9H2R5 256 aa12.94□□□□□ -0.34
CHMP3-203ENST00000409225 ADGRL4Q9HBW9 690 aa12.94□□□□□ -0.34
CHMP3-203ENST00000409225 CLN6Q9NWW5 311 aa12.94□□□□□ -0.34
CHMP3-203ENST00000409225 KIF25Q9UIL4 384 aa12.94□□□□□ -0.34
CHMP3-203ENST00000409225 MEIKINA0A087WXM9 373 aa12.93□□□□□ -0.34
CHMP3-203ENST00000409225 LOC107986453A0A1B0GWG9 222 aa12.93□□□□□ -0.34
CHMP3-203ENST00000409225 KDM4BO94953 1096 aa12.93□□□□□ -0.34
CHMP3-203ENST00000409225 GAPDHP04406 335 aaKnown RBP12.93□□□□□ -0.34
CHMP3-203ENST00000409225 KRT8P05787 483 aa12.93□□□□□ -0.34
CHMP3-203ENST00000409225 IGHV4-30-4P0DP06 118 aa12.93□□□□□ -0.34
CHMP3-203ENST00000409225 ATF1P18846 271 aa12.93□□□□□ -0.34
CHMP3-203ENST00000409225 PRKACBP22694 351 aa12.93□□□□□ -0.34
CHMP3-203ENST00000409225 TMEM65Q6PI78 240 aa12.93□□□□□ -0.34
CHMP3-203ENST00000409225 DHFR2Q86XF0 187 aa12.93□□□□□ -0.34
CHMP3-203ENST00000409225 ZNF491Q8N8L2 437 aa12.93□□□□□ -0.34
CHMP3-203ENST00000409225 ZNF565Q8N9K5 539 aa12.93□□□□□ -0.34
CHMP3-203ENST00000409225 CHST4Q8NCG5 386 aa12.93□□□□□ -0.34
CHMP3-203ENST00000409225 CCDC54Q8NEL0 328 aa12.93□□□□□ -0.34
CHMP3-203ENST00000409225 OR5D18Q8NGL1 313 aa12.93□□□□□ -0.34
CHMP3-203ENST00000409225 OR6Q1Q8NGQ2 317 aa12.93□□□□□ -0.34
CHMP3-203ENST00000409225 MYOZ3Q8TDC0 251 aa12.93□□□□□ -0.34
CHMP3-203ENST00000409225 ADAT3Q96EY9 351 aaPredicted RBP12.93□□□□□ -0.34
CHMP3-203ENST00000409225 UBE2E2Q96LR5 201 aa12.93□□□□□ -0.34
CHMP3-203ENST00000409225 NEK6Q9HC98 313 aa12.93□□□□□ -0.34
CHMP3-203ENST00000409225 PLSCR3Q9NRY6 295 aa12.93□□□□□ -0.34
CHMP3-203ENST00000409225 VSIG4Q9Y279 399 aa12.93□□□□□ -0.34
CHMP3-203ENST00000409225 HERC2O95714 4834 aa12.93□□□□□ -0.34
CHMP3-203ENST00000409225 M0R129 80 aa12.92□□□□□ -0.34
CHMP3-203ENST00000409225 GNGT2O14610 69 aa12.92□□□□□ -0.34
CHMP3-203ENST00000409225 PRKYO43930 277 aa12.92□□□□□ -0.34
CHMP3-203ENST00000409225 RAP2AP10114 183 aa12.92□□□□□ -0.34
CHMP3-203ENST00000409225 PRKACGP22612 351 aa12.92□□□□□ -0.34
CHMP3-203ENST00000409225 C21orf33P30042 268 aaPredicted RBP12.92□□□□□ -0.34
CHMP3-203ENST00000409225 SOX6P35712 828 aa12.92□□□□□ -0.34
CHMP3-203ENST00000409225 RUNX1Q01196 453 aa12.92□□□□□ -0.34
CHMP3-203ENST00000409225 KIAA0141Q14154 515 aaPredicted RBP12.92□□□□□ -0.34
CHMP3-203ENST00000409225 RDH10Q8IZV5 341 aa12.92□□□□□ -0.34
CHMP3-203ENST00000409225 MRGPRDQ8TDS7 321 aa12.92□□□□□ -0.34
CHMP3-203ENST00000409225 DLX4Q92988 240 aaPredicted RBP12.92□□□□□ -0.34
CHMP3-203ENST00000409225 C10orf35Q96D05 121 aa12.92□□□□□ -0.34
CHMP3-203ENST00000409225 RBMXL1Q96E39 390 aaKnown RBP12.92□□□□□ -0.34
CHMP3-203ENST00000409225 OPALINQ96PE5 141 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms