RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 INO80EQ8NBZ0 244 aaPredicted RBP20.94■□□□□ 0.94
DNMT3A-206ENST00000406659 MUCL1Q96DR8 90 aa20.94■□□□□ 0.94
DNMT3A-206ENST00000406659 OR10C1Q96KK4 312 aa20.94■□□□□ 0.94
DNMT3A-206ENST00000406659 RSRP1Q9BUV0 290 aa20.94■□□□□ 0.94
DNMT3A-206ENST00000406659 RASL12Q9NYN1 266 aa20.94■□□□□ 0.94
DNMT3A-206ENST00000406659 ANKRD34BA5PLL1 514 aa20.93■□□□□ 0.94
DNMT3A-206ENST00000406659 MPTX1A8MV57 137 aa20.93■□□□□ 0.94
DNMT3A-206ENST00000406659 PAN3Q58A45 887 aaKnown RBP20.93■□□□□ 0.94
DNMT3A-206ENST00000406659 SLX1AQ9BQ83 275 aa20.93■□□□□ 0.94
DNMT3A-206ENST00000406659 SLC2A9Q9NRM0 540 aa20.93■□□□□ 0.94
DNMT3A-206ENST00000406659 MEMO1Q9Y316 297 aa20.93■□□□□ 0.94
DNMT3A-206ENST00000406659 MSRB2Q9Y3D2 182 aa20.93■□□□□ 0.94
DNMT3A-206ENST00000406659 LINC00862A6NCI5 91 aa20.92■□□□□ 0.94
DNMT3A-206ENST00000406659 M0R1B8 84 aa20.92■□□□□ 0.94
DNMT3A-206ENST00000406659 PRRG2O14669 202 aa20.92■□□□□ 0.94
DNMT3A-206ENST00000406659 SH2D1BO14796 132 aa20.92■□□□□ 0.94
DNMT3A-206ENST00000406659 IFNA21P01568 189 aa20.92■□□□□ 0.94
DNMT3A-206ENST00000406659 ACAA1P09110 424 aaPredicted RBP20.92■□□□□ 0.94
DNMT3A-206ENST00000406659 C6orf183Q5T699 404 aa20.92■□□□□ 0.94
DNMT3A-206ENST00000406659 FIP1L1Q6UN15 594 aaKnown RBP20.92■□□□□ 0.94
DNMT3A-206ENST00000406659 C5orf24Q7Z6I8 188 aa20.92■□□□□ 0.94
DNMT3A-206ENST00000406659 SPERTQ8NA61 448 aa20.92■□□□□ 0.94
DNMT3A-206ENST00000406659 KANTRA0A1W2PQU2 76 aa20.92■□□□□ 0.94
DNMT3A-206ENST00000406659 SIRPB1O00241 398 aa20.92■□□□□ 0.94
DNMT3A-206ENST00000406659 B3GALNT1O75752 331 aa20.92■□□□□ 0.94
DNMT3A-206ENST00000406659 OR2H2O95918 312 aa20.92■□□□□ 0.94
DNMT3A-206ENST00000406659 MDH2P40926 338 aaKnown RBP20.92■□□□□ 0.94
DNMT3A-206ENST00000406659 POC1AQ8NBT0 407 aa20.92■□□□□ 0.94
DNMT3A-206ENST00000406659 GALNT14Q96FL9 552 aa20.92■□□□□ 0.94
DNMT3A-206ENST00000406659 SUCNR1Q9BXA5 334 aa20.92■□□□□ 0.94
DNMT3A-206ENST00000406659 GSX2Q9BZM3 304 aa20.92■□□□□ 0.94
DNMT3A-206ENST00000406659 GSKIPQ9P0R6 139 aa20.92■□□□□ 0.94
DNMT3A-206ENST00000406659 APC2O95996 2303 aa20.91■□□□□ 0.94
DNMT3A-206ENST00000406659 SPTBN2O15020 2390 aa20.91■□□□□ 0.94
DNMT3A-206ENST00000406659 RNF222A6NCQ9 220 aa20.91■□□□□ 0.94
DNMT3A-206ENST00000406659 TDGF1P3P51864 188 aa20.91■□□□□ 0.94
DNMT3A-206ENST00000406659 TMEM187Q14656 261 aa20.91■□□□□ 0.94
DNMT3A-206ENST00000406659 RGS7BPQ6MZT1 257 aaPredicted RBP20.91■□□□□ 0.94
DNMT3A-206ENST00000406659 C20orf204Q6ZNR8 217 aa20.91■□□□□ 0.94
DNMT3A-206ENST00000406659 DCUN1D4Q92564 292 aa20.91■□□□□ 0.94
DNMT3A-206ENST00000406659 CITED4Q96RK1 184 aa20.91■□□□□ 0.94
DNMT3A-206ENST00000406659 RNF126Q9BV68 326 aa20.91■□□□□ 0.94
DNMT3A-206ENST00000406659 SPEF1Q9Y4P9 236 aa20.91■□□□□ 0.94
DNMT3A-206ENST00000406659 RPS10-NUDT3A0A1W2PQS6 291 aa20.9■□□□□ 0.94
DNMT3A-206ENST00000406659 H7C1Q1 480 aa20.9■□□□□ 0.94
DNMT3A-206ENST00000406659 OR5AC1P0C628 307 aa20.9■□□□□ 0.94
DNMT3A-206ENST00000406659 ZNF146Q15072 292 aa20.9■□□□□ 0.94
DNMT3A-206ENST00000406659 C3orf36Q3SXR2 165 aa20.9■□□□□ 0.94
DNMT3A-206ENST00000406659 SP6Q3SY56 376 aa20.9■□□□□ 0.94
DNMT3A-206ENST00000406659 SPIN3Q5JUX0 258 aa20.9■□□□□ 0.94
DNMT3A-206ENST00000406659 ZNF880Q6PDB4 577 aa20.9■□□□□ 0.94
DNMT3A-206ENST00000406659 Q6ZR03 302 aa20.9■□□□□ 0.94
DNMT3A-206ENST00000406659 DOLPP1Q86YN1 238 aa20.9■□□□□ 0.94
DNMT3A-206ENST00000406659 ZNF565Q8N9K5 539 aa20.9■□□□□ 0.94
DNMT3A-206ENST00000406659 Q8NA96 180 aa20.9■□□□□ 0.94
DNMT3A-206ENST00000406659 MSL2Q9HCI7 577 aa20.9■□□□□ 0.94
DNMT3A-206ENST00000406659 PRR14LQ5THK1 2151 aa20.9■□□□□ 0.94
DNMT3A-206ENST00000406659 TUBAL3A6NHL2 446 aa20.9■□□□□ 0.94
DNMT3A-206ENST00000406659 A6NLC8 198 aa20.9■□□□□ 0.94
DNMT3A-206ENST00000406659 SLC33A1O00400 549 aaPredicted RBP20.9■□□□□ 0.94
DNMT3A-206ENST00000406659 BCL2L11O43521 198 aa20.9■□□□□ 0.94
DNMT3A-206ENST00000406659 HERPUD1Q15011 391 aa20.9■□□□□ 0.94
DNMT3A-206ENST00000406659 OR4A4PQ8NGN8 299 aa20.9■□□□□ 0.94
DNMT3A-206ENST00000406659 OR11L1Q8NGX0 322 aa20.9■□□□□ 0.94
DNMT3A-206ENST00000406659 SCARB1Q8WTV0 552 aa20.9■□□□□ 0.94
DNMT3A-206ENST00000406659 PCNPQ8WW12 178 aaKnown RBP20.9■□□□□ 0.94
DNMT3A-206ENST00000406659 TREM2Q9NZC2 230 aa20.9■□□□□ 0.94
DNMT3A-206ENST00000406659 TRBV6-7A0A0A0MS04 114 aa20.89■□□□□ 0.93
DNMT3A-206ENST00000406659 POM121CA8CG34 1229 aa20.89■□□□□ 0.93
DNMT3A-206ENST00000406659 UBA52P62987 128 aaKnown RBP20.89■□□□□ 0.93
DNMT3A-206ENST00000406659 HLA-DRB3P79483 266 aa20.89■□□□□ 0.93
DNMT3A-206ENST00000406659 MZT1Q08AG7 82 aa20.89■□□□□ 0.93
DNMT3A-206ENST00000406659 BEX5Q5H9J7 111 aa20.89■□□□□ 0.93
DNMT3A-206ENST00000406659 ALKAL2Q6UX46 152 aa20.89■□□□□ 0.93
DNMT3A-206ENST00000406659 GFRALQ6UXV0 394 aa20.89■□□□□ 0.93
DNMT3A-206ENST00000406659 C11orf53Q8IXP5 236 aa20.89■□□□□ 0.93
DNMT3A-206ENST00000406659 FAM185AQ8N0U4 392 aa20.89■□□□□ 0.93
DNMT3A-206ENST00000406659 SECTM1Q8WVN6 248 aa20.89■□□□□ 0.93
DNMT3A-206ENST00000406659 GLS2Q9UI32 602 aa20.89■□□□□ 0.93
DNMT3A-206ENST00000406659 MGAQ8IWI9 3026 aa20.89■□□□□ 0.93
DNMT3A-206ENST00000406659 SHANK1Q9Y566 2161 aa20.89■□□□□ 0.93
DNMT3A-206ENST00000406659 IGKV1-6A0A0C4DH72 117 aa20.88■□□□□ 0.93
DNMT3A-206ENST00000406659 SPDEFO95238 335 aa20.88■□□□□ 0.93
DNMT3A-206ENST00000406659 CRYAAP02489 173 aa20.88■□□□□ 0.93
DNMT3A-206ENST00000406659 PET100P0DJ07 73 aa20.88■□□□□ 0.93
DNMT3A-206ENST00000406659 RCC1P18754 421 aaPredicted RBP20.88■□□□□ 0.93
DNMT3A-206ENST00000406659 BMP5P22003 454 aa20.88■□□□□ 0.93
DNMT3A-206ENST00000406659 NUP62P37198 522 aaPredicted RBP20.88■□□□□ 0.93
DNMT3A-206ENST00000406659 IAH1Q2TAA2 248 aaPredicted RBP20.88■□□□□ 0.93
DNMT3A-206ENST00000406659 GGNBP1Q5YKI7 109 aa20.88■□□□□ 0.93
DNMT3A-206ENST00000406659 PRSS54Q6PEW0 395 aa20.88■□□□□ 0.93
DNMT3A-206ENST00000406659 ZNF826PQ6ZT77 177 aa20.88■□□□□ 0.93
DNMT3A-206ENST00000406659 MRPL24Q96A35 216 aaKnown RBP20.88■□□□□ 0.93
DNMT3A-206ENST00000406659 HES4Q9HCC6 221 aa20.88■□□□□ 0.93
DNMT3A-206ENST00000406659 PCDHB10Q9UN67 800 aa20.88■□□□□ 0.93
DNMT3A-206ENST00000406659 ANKRD11Q6UB99 2663 aaPredicted RBP20.87■□□□□ 0.93
DNMT3A-206ENST00000406659 A8MXE2 369 aa20.87■□□□□ 0.93
DNMT3A-206ENST00000406659 H0YIZ8 118 aa20.87■□□□□ 0.93
DNMT3A-206ENST00000406659 TUSC2O75896 110 aa20.87■□□□□ 0.93
DNMT3A-206ENST00000406659 PRAMEF6Q5VXH4 476 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms