RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 OR6C3Q9NZP0 311 aa12.32□□□□□ -0.44
TPM1-207ENST00000403994 DPM3Q9P2X0 92 aa12.32□□□□□ -0.44
TPM1-207ENST00000403994 A0A087X0M5 115 aa12.31□□□□□ -0.44
TPM1-207ENST00000403994 A0A1B0GX30 115 aa12.31□□□□□ -0.44
TPM1-207ENST00000403994 MAGEB3O15480 346 aa12.31□□□□□ -0.44
TPM1-207ENST00000403994 CD24P25063 80 aa12.31□□□□□ -0.44
TPM1-207ENST00000403994 OR3A4PP47883 348 aa12.31□□□□□ -0.44
TPM1-207ENST00000403994 RSU1Q15404 277 aa12.31□□□□□ -0.44
TPM1-207ENST00000403994 TMPRSS11AQ6ZMR5 421 aa12.31□□□□□ -0.44
TPM1-207ENST00000403994 SATL1Q86VE3 508 aa12.31□□□□□ -0.44
TPM1-207ENST00000403994 OR13A1Q8NGR1 328 aa12.31□□□□□ -0.44
TPM1-207ENST00000403994 CYGBQ8WWM9 190 aa12.31□□□□□ -0.44
TPM1-207ENST00000403994 SMIM19Q96E16 107 aa12.31□□□□□ -0.44
TPM1-207ENST00000403994 KIRREL1Q96J84 757 aa12.31□□□□□ -0.44
TPM1-207ENST00000403994 OR5M11Q96RB7 305 aa12.31□□□□□ -0.44
TPM1-207ENST00000403994 KIF25Q9UIL4 384 aa12.31□□□□□ -0.44
TPM1-207ENST00000403994 DIMT1Q9UNQ2 313 aaKnown RBP12.31□□□□□ -0.44
TPM1-207ENST00000403994 SIRT4Q9Y6E7 314 aaPredicted RBP12.31□□□□□ -0.44
TPM1-207ENST00000403994 KBTBD11-OT1A0A1B0GTJ5 212 aa12.3□□□□□ -0.44
TPM1-207ENST00000403994 IRGMA1A4Y4 181 aa12.3□□□□□ -0.44
TPM1-207ENST00000403994 ADARB2-AS1A8MUL3 147 aa12.3□□□□□ -0.44
TPM1-207ENST00000403994 LEUTXA8MZ59 168 aa12.3□□□□□ -0.44
TPM1-207ENST00000403994 PEX14O75381 377 aa12.3□□□□□ -0.44
TPM1-207ENST00000403994 LALBAP00709 142 aa12.3□□□□□ -0.44
TPM1-207ENST00000403994 ALDOBP05062 364 aa12.3□□□□□ -0.44
TPM1-207ENST00000403994 MYL12AP19105 171 aa12.3□□□□□ -0.44
TPM1-207ENST00000403994 ARHGDIBP52566 201 aa12.3□□□□□ -0.44
TPM1-207ENST00000403994 PAX5Q02548 391 aa12.3□□□□□ -0.44
TPM1-207ENST00000403994 RBM39Q14498 530 aaKnown RBP12.3□□□□□ -0.44
TPM1-207ENST00000403994 LRRC36Q1X8D7 754 aa12.3□□□□□ -0.44
TPM1-207ENST00000403994 NSUN5P1Q3KNT7 163 aa12.3□□□□□ -0.44
TPM1-207ENST00000403994 TPTE2P1Q5T6R2 138 aa12.3□□□□□ -0.44
TPM1-207ENST00000403994 RSBN1Q5VWQ0 802 aaPredicted RBP12.3□□□□□ -0.44
TPM1-207ENST00000403994 C16orf82Q7Z2V1 217 aa12.3□□□□□ -0.44
TPM1-207ENST00000403994 Q8NFD4 153 aa12.3□□□□□ -0.44
TPM1-207ENST00000403994 OR13C5Q8NGS8 318 aa12.3□□□□□ -0.44
TPM1-207ENST00000403994 PLPPR1Q8TBJ4 325 aa12.3□□□□□ -0.44
TPM1-207ENST00000403994 LIN7BQ9HAP6 207 aa12.3□□□□□ -0.44
TPM1-207ENST00000403994 CALYQ9NYX4 217 aa12.3□□□□□ -0.44
TPM1-207ENST00000403994 ZNF581Q9P0T4 197 aa12.3□□□□□ -0.44
TPM1-207ENST00000403994 EXOSC1Q9Y3B2 195 aaKnown RBP12.3□□□□□ -0.44
TPM1-207ENST00000403994 MEIKINA0A087WXM9 373 aa12.29□□□□□ -0.44
TPM1-207ENST00000403994 G3V4G9 280 aa12.29□□□□□ -0.44
TPM1-207ENST00000403994 LY6LH3BQJ8 138 aa12.29□□□□□ -0.44
TPM1-207ENST00000403994 BUB1B-PAK6H3BSN5 160 aa12.29□□□□□ -0.44
TPM1-207ENST00000403994 TOR1AO14656 332 aa12.29□□□□□ -0.44
TPM1-207ENST00000403994 IL1AP01583 271 aa12.29□□□□□ -0.44
TPM1-207ENST00000403994 CGB3P0DN86 165 aa12.29□□□□□ -0.44
TPM1-207ENST00000403994 CGB7P0DN87 165 aa12.29□□□□□ -0.44
TPM1-207ENST00000403994 NFYBP25208 207 aa12.29□□□□□ -0.44
TPM1-207ENST00000403994 BRS3P32247 399 aa12.29□□□□□ -0.44
TPM1-207ENST00000403994 CEACAM3P40198 252 aa12.29□□□□□ -0.44
TPM1-207ENST00000403994 RBM11P57052 281 aaKnown RBP12.29□□□□□ -0.44
TPM1-207ENST00000403994 PPP3R1P63098 170 aa12.29□□□□□ -0.44
TPM1-207ENST00000403994 DDI2Q5TDH0 399 aa12.29□□□□□ -0.44
TPM1-207ENST00000403994 ASCL4Q6XD76 172 aa12.29□□□□□ -0.44
TPM1-207ENST00000403994 NDUFA11Q86Y39 141 aa12.29□□□□□ -0.44
TPM1-207ENST00000403994 CREB3L1Q96BA8 519 aa12.29□□□□□ -0.44
TPM1-207ENST00000403994 ORAI1Q96D31 301 aa12.29□□□□□ -0.44
TPM1-207ENST00000403994 CITED2Q99967 270 aaPredicted RBP12.29□□□□□ -0.44
TPM1-207ENST00000403994 OCSTAMPQ9BR26 566 aa12.29□□□□□ -0.44
TPM1-207ENST00000403994 SLC25A33Q9BSK2 321 aa12.29□□□□□ -0.44
TPM1-207ENST00000403994 MMP28Q9H239 520 aa12.29□□□□□ -0.44
TPM1-207ENST00000403994 NCOR1P1Q9H4R4 102 aa12.29□□□□□ -0.44
TPM1-207ENST00000403994 TMEM138Q9NPI0 162 aa12.29□□□□□ -0.44
TPM1-207ENST00000403994 IL36GQ9NZH8 169 aa12.29□□□□□ -0.44
TPM1-207ENST00000403994 CLEC2DQ9UHP7 191 aa12.29□□□□□ -0.44
TPM1-207ENST00000403994 MAGEA13PA6NCF6 341 aa12.28□□□□□ -0.44
TPM1-207ENST00000403994 OGG1O15527 345 aa12.28□□□□□ -0.44
TPM1-207ENST00000403994 OR2F2O95006 317 aa12.28□□□□□ -0.44
TPM1-207ENST00000403994 CDRT1O95170 752 aa12.28□□□□□ -0.44
TPM1-207ENST00000403994 HTR3BO95264 441 aa12.28□□□□□ -0.44
TPM1-207ENST00000403994 SSTR5P35346 364 aa12.28□□□□□ -0.44
TPM1-207ENST00000403994 KCNJ3P48549 501 aa12.28□□□□□ -0.44
TPM1-207ENST00000403994 BEAN1Q3B7T3 259 aa12.28□□□□□ -0.44
TPM1-207ENST00000403994 NHLRC3Q5JS37 347 aa12.28□□□□□ -0.44
TPM1-207ENST00000403994 SAMD5Q5TGI4 173 aa12.28□□□□□ -0.44
TPM1-207ENST00000403994 DMKNQ6E0U4 476 aaPredicted RBP12.28□□□□□ -0.44
TPM1-207ENST00000403994 PACRGLQ8N7B6 248 aa12.28□□□□□ -0.44
TPM1-207ENST00000403994 SETD9Q8NE22 299 aa12.28□□□□□ -0.44
TPM1-207ENST00000403994 OR52N1Q8NH53 320 aa12.28□□□□□ -0.44
TPM1-207ENST00000403994 OR9G1Q8NH87 305 aa12.28□□□□□ -0.44
TPM1-207ENST00000403994 AKR1E2Q96JD6 320 aa12.28□□□□□ -0.44
TPM1-207ENST00000403994 IFT22Q9H7X7 185 aa12.28□□□□□ -0.44
TPM1-207ENST00000403994 LINC00574Q9H8X3 128 aa12.28□□□□□ -0.44
TPM1-207ENST00000403994 BABAM2Q9NXR7 383 aa12.28□□□□□ -0.44
TPM1-207ENST00000403994 ZNF281Q9Y2X9 895 aa12.28□□□□□ -0.44
TPM1-207ENST00000403994 TRBV5-5A0A0J9YX44 114 aa12.27□□□□□ -0.45
TPM1-207ENST00000403994 OOSP1A8MZH6 123 aa12.27□□□□□ -0.45
TPM1-207ENST00000403994 H3BUI4 141 aa12.27□□□□□ -0.45
TPM1-207ENST00000403994 IGFBP3P17936 291 aaPredicted RBP12.27□□□□□ -0.45
TPM1-207ENST00000403994 FSTP19883 344 aa12.27□□□□□ -0.45
TPM1-207ENST00000403994 BDKRB2P30411 391 aa12.27□□□□□ -0.45
TPM1-207ENST00000403994 ZNF93P35789 620 aaPredicted RBP12.27□□□□□ -0.45
TPM1-207ENST00000403994 PRRX1P54821 245 aa12.27□□□□□ -0.45
TPM1-207ENST00000403994 ADARB1P78563 741 aaKnown RBP12.27□□□□□ -0.45
TPM1-207ENST00000403994 RIPK1Q13546 671 aa12.27□□□□□ -0.45
TPM1-207ENST00000403994 RCN1Q15293 331 aa12.27□□□□□ -0.45
TPM1-207ENST00000403994 KPRPQ5T749 579 aaPredicted RBP12.27□□□□□ -0.45
TPM1-207ENST00000403994 TTC23Q5W5X9 447 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms