RNA–Protein interactions for RNA: ENST00000402314.6

ATG3-202, Transcript of autophagy related 3, humanhuman

TSL 1 (best) BASIC

Gene ATG3, Length 3,010 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-202ENST00000402314 REC114Q7Z4M0 266 aa12.21□□□□□ -0.46
ATG3-202ENST00000402314 ANGPTL4Q9BY76 406 aa12.21□□□□□ -0.46
ATG3-202ENST00000402314 CCDC187A0A096LP49 1063 aa12.2□□□□□ -0.46
ATG3-202ENST00000402314 C9J4A7 227 aa12.2□□□□□ -0.46
ATG3-202ENST00000402314 E5RGE8 158 aa12.2□□□□□ -0.46
ATG3-202ENST00000402314 TCAPO15273 167 aa12.2□□□□□ -0.46
ATG3-202ENST00000402314 SPINK2P20155 84 aa12.2□□□□□ -0.46
ATG3-202ENST00000402314 ATP6V0CP27449 155 aa12.2□□□□□ -0.46
ATG3-202ENST00000402314 P2RY1P47900 373 aa12.2□□□□□ -0.46
ATG3-202ENST00000402314 FGFBP3Q8TAT2 258 aa12.2□□□□□ -0.46
ATG3-202ENST00000402314 SSC4DQ8WTU2 575 aa12.2□□□□□ -0.46
ATG3-202ENST00000402314 GALNT14Q96FL9 552 aa12.2□□□□□ -0.46
ATG3-202ENST00000402314 NSG2Q9Y328 171 aa12.2□□□□□ -0.46
ATG3-202ENST00000402314 H3BP45 60 aa12.2□□□□□ -0.46
ATG3-202ENST00000402314 PHF1O43189 567 aaPredicted RBP12.2□□□□□ -0.46
ATG3-202ENST00000402314 DHRS3O75911 302 aa12.2□□□□□ -0.46
ATG3-202ENST00000402314 SEC11BP0C7V7 166 aa12.2□□□□□ -0.46
ATG3-202ENST00000402314 IL2RGP31785 369 aa12.2□□□□□ -0.46
ATG3-202ENST00000402314 Q0VFX4 171 aa12.2□□□□□ -0.46
ATG3-202ENST00000402314 OR14L1PQ8NHC6 308 aa12.2□□□□□ -0.46
ATG3-202ENST00000402314 MALSU1Q96EH3 234 aa12.2□□□□□ -0.46
ATG3-202ENST00000402314 KCNIP3Q9Y2W7 256 aa12.2□□□□□ -0.46
ATG3-202ENST00000402314 NBEAQ8NFP9 2946 aa12.2□□□□□ -0.46
ATG3-202ENST00000402314 ZFP92A6NM28 416 aa12.19□□□□□ -0.46
ATG3-202ENST00000402314 MSTNO14793 375 aa12.19□□□□□ -0.46
ATG3-202ENST00000402314 CXCL13O43927 109 aa12.19□□□□□ -0.46
ATG3-202ENST00000402314 SUCLG1P53597 346 aaKnown RBP12.19□□□□□ -0.46
ATG3-202ENST00000402314 DSCR4P56555 118 aaPredicted RBP12.19□□□□□ -0.46
ATG3-202ENST00000402314 TAS2R46P59540 309 aa12.19□□□□□ -0.46
ATG3-202ENST00000402314 RAB11AP62491 216 aa12.19□□□□□ -0.46
ATG3-202ENST00000402314 IL11RAQ14626 422 aa12.19□□□□□ -0.46
ATG3-202ENST00000402314 WIPI1Q5MNZ9 446 aaPredicted RBP12.19□□□□□ -0.46
ATG3-202ENST00000402314 DPPA2Q7Z7J5 298 aa12.19□□□□□ -0.46
ATG3-202ENST00000402314 OR2Y1Q8NGV0 311 aa12.19□□□□□ -0.46
ATG3-202ENST00000402314 HPSE2Q8WWQ2 592 aa12.19□□□□□ -0.46
ATG3-202ENST00000402314 HAS2Q92819 552 aa12.19□□□□□ -0.46
ATG3-202ENST00000402314 WDR54Q9H977 334 aa12.19□□□□□ -0.46
ATG3-202ENST00000402314 FBLN5Q9UBX5 448 aa12.19□□□□□ -0.46
ATG3-202ENST00000402314 DOCK10Q96BY6 2186 aa12.19□□□□□ -0.46
ATG3-202ENST00000402314 A0A1W2PR80 420 aa12.19□□□□□ -0.46
ATG3-202ENST00000402314 HSD17B6O14756 317 aa12.19□□□□□ -0.46
ATG3-202ENST00000402314 TAS2R60P59551 318 aa12.19□□□□□ -0.46
ATG3-202ENST00000402314 C9orf135Q5VTT2 229 aa12.19□□□□□ -0.46
ATG3-202ENST00000402314 TMEM54Q969K7 222 aa12.19□□□□□ -0.46
ATG3-202ENST00000402314 YPEL4Q96NS1 127 aa12.19□□□□□ -0.46
ATG3-202ENST00000402314 PRO3102Q9H379 93 aa12.19□□□□□ -0.46
ATG3-202ENST00000402314 WSB1Q9Y6I7 421 aa12.19□□□□□ -0.46
ATG3-202ENST00000402314 NCKAP5O14513 1909 aa12.19□□□□□ -0.46
ATG3-202ENST00000402314 SMCO3A2RU48 225 aa12.19□□□□□ -0.46
ATG3-202ENST00000402314 FUT3P21217 361 aa12.19□□□□□ -0.46
ATG3-202ENST00000402314 FGF8P55075 233 aaPredicted RBP12.19□□□□□ -0.46
ATG3-202ENST00000402314 MTCP1P56278 107 aa12.19□□□□□ -0.46
ATG3-202ENST00000402314 SLC23A3Q6PIS1 610 aa12.19□□□□□ -0.46
ATG3-202ENST00000402314 MAML2Q8IZL2 1156 aaPredicted RBP12.19□□□□□ -0.46
ATG3-202ENST00000402314 TMEM105Q8N8V8 129 aa12.19□□□□□ -0.46
ATG3-202ENST00000402314 RNASE11Q8TAA1 199 aaKnown RBP12.19□□□□□ -0.46
ATG3-202ENST00000402314 ZNF845Q96IR2 970 aaPredicted RBP12.19□□□□□ -0.46
ATG3-202ENST00000402314 GNG13Q9P2W3 67 aa12.19□□□□□ -0.46
ATG3-202ENST00000402314 DSPP15924 2871 aaKnown RBP12.18□□□□□ -0.46
ATG3-202ENST00000402314 IGKV1-27A0A075B6S5 117 aa12.18□□□□□ -0.46
ATG3-202ENST00000402314 SSSCA1O60232 199 aa12.18□□□□□ -0.46
ATG3-202ENST00000402314 LCATP04180 440 aa12.18□□□□□ -0.46
ATG3-202ENST00000402314 RPL23AP62750 156 aaKnown RBP12.18□□□□□ -0.46
ATG3-202ENST00000402314 RAB1AP62820 205 aa12.18□□□□□ -0.46
ATG3-202ENST00000402314 FAM210BQ96KR6 192 aa12.18□□□□□ -0.46
ATG3-202ENST00000402314 FOXD3Q9UJU5 478 aaPredicted RBP12.18□□□□□ -0.46
ATG3-202ENST00000402314 DOCK11Q5JSL3 2073 aa12.18□□□□□ -0.46
ATG3-202ENST00000402314 LOC102725191A0A1B0GVB3 256 aa12.18□□□□□ -0.46
ATG3-202ENST00000402314 HLA-HP01893 362 aa12.18□□□□□ -0.46
ATG3-202ENST00000402314 MLF1P58340 268 aa12.18□□□□□ -0.46
ATG3-202ENST00000402314 MPV17LQ2QL34 196 aa12.18□□□□□ -0.46
ATG3-202ENST00000402314 C10orf128Q5T292 105 aa12.18□□□□□ -0.46
ATG3-202ENST00000402314 NIPSNAP3BQ9BS92 247 aa12.18□□□□□ -0.46
ATG3-202ENST00000402314 PLEKHA2Q9HB19 425 aa12.18□□□□□ -0.46
ATG3-202ENST00000402314 DEPPQ9NTK1 212 aa12.18□□□□□ -0.46
ATG3-202ENST00000402314 PINLYPA6NC86 204 aa12.17□□□□□ -0.46
ATG3-202ENST00000402314 EREGO14944 169 aa12.17□□□□□ -0.46
ATG3-202ENST00000402314 CD55P08174 381 aa12.17□□□□□ -0.46
ATG3-202ENST00000402314 ZNF728P0DKX0 622 aa12.17□□□□□ -0.46
ATG3-202ENST00000402314 ZNF32P17041 273 aa12.17□□□□□ -0.46
ATG3-202ENST00000402314 FOLR3P41439 243 aa12.17□□□□□ -0.46
ATG3-202ENST00000402314 PKIAP61925 76 aa12.17□□□□□ -0.46
ATG3-202ENST00000402314 EWSR1Q01844 656 aaKnown RBP eCLIP12.17□□□□□ -0.46
ATG3-202ENST00000402314 EXT1Q16394 746 aa12.17□□□□□ -0.46
ATG3-202ENST00000402314 HIST2H3PS2Q5TEC6 136 aa12.17□□□□□ -0.46
ATG3-202ENST00000402314 TMEM171Q8WVE6 324 aa12.17□□□□□ -0.46
ATG3-202ENST00000402314 HIST1H2BLQ99880 126 aa12.17□□□□□ -0.46
ATG3-202ENST00000402314 GINS3Q9BRX5 216 aa12.17□□□□□ -0.46
ATG3-202ENST00000402314 COLQQ9Y215 455 aaPredicted RBP12.17□□□□□ -0.46
ATG3-202ENST00000402314 CFAP47Q6ZTR5 3102 aa12.17□□□□□ -0.46
ATG3-202ENST00000402314 CRYM-AS1A6NIL9 109 aa12.17□□□□□ -0.46
ATG3-202ENST00000402314 K7N7A8 449 aa12.17□□□□□ -0.46
ATG3-202ENST00000402314 GPR137BO60478 399 aa12.17□□□□□ -0.46
ATG3-202ENST00000402314 SCGNO76038 276 aa12.17□□□□□ -0.46
ATG3-202ENST00000402314 IGLV3-1P01715 115 aa12.17□□□□□ -0.46
ATG3-202ENST00000402314 SRP19P09132 144 aaKnown RBP12.17□□□□□ -0.46
ATG3-202ENST00000402314 EPHA1P21709 976 aa12.17□□□□□ -0.46
ATG3-202ENST00000402314 RAC1P63000 192 aa12.17□□□□□ -0.46
ATG3-202ENST00000402314 MYPOPQ86VE0 399 aaPredicted RBP12.17□□□□□ -0.46
ATG3-202ENST00000402314 C1QL4Q86Z23 238 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms