RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 GPR37O15354 613 aa13.16□□□□□ -0.3
HMGA1-204ENST00000401473 PDCD6O75340 191 aa13.16□□□□□ -0.3
HMGA1-204ENST00000401473 CSN2P05814 226 aa13.16□□□□□ -0.3
HMGA1-204ENST00000401473 GLIPR1P48060 266 aa13.16□□□□□ -0.3
HMGA1-204ENST00000401473 GZMKP49863 264 aa13.16□□□□□ -0.3
HMGA1-204ENST00000401473 EDDM3AQ14507 147 aa13.16□□□□□ -0.3
HMGA1-204ENST00000401473 CYB5R2Q6BCY4 276 aa13.16□□□□□ -0.3
HMGA1-204ENST00000401473 LY6G5BQ8NDX9 201 aa13.16□□□□□ -0.3
HMGA1-204ENST00000401473 SULT4A1Q9BR01 284 aa13.16□□□□□ -0.3
HMGA1-204ENST00000401473 DCUN1D5Q9BTE7 237 aa13.16□□□□□ -0.3
HMGA1-204ENST00000401473 ATG5Q9H1Y0 275 aa13.16□□□□□ -0.3
HMGA1-204ENST00000401473 HIF1ANQ9NWT6 349 aa13.16□□□□□ -0.3
HMGA1-204ENST00000401473 KCNK7Q9Y2U2 307 aa13.16□□□□□ -0.3
HMGA1-204ENST00000401473 ETV7Q9Y603 341 aa13.16□□□□□ -0.3
HMGA1-204ENST00000401473 EDDM3BP56851 147 aa13.16□□□□□ -0.3
HMGA1-204ENST00000401473 NKAPLQ5M9Q1 402 aa13.16□□□□□ -0.3
HMGA1-204ENST00000401473 GDPD3Q7L5L3 318 aa13.16□□□□□ -0.3
HMGA1-204ENST00000401473 CMTM4Q8IZR5 234 aa13.16□□□□□ -0.3
HMGA1-204ENST00000401473 SAMD12Q8N8I0 201 aa13.16□□□□□ -0.3
HMGA1-204ENST00000401473 RAB40AQ8WXH6 277 aa13.16□□□□□ -0.3
HMGA1-204ENST00000401473 DYRK2Q92630 601 aa13.16□□□□□ -0.3
HMGA1-204ENST00000401473 TMEM186Q96B77 213 aa13.16□□□□□ -0.3
HMGA1-204ENST00000401473 ARHGAP5-AS1Q96IT6 56 aa13.16□□□□□ -0.3
HMGA1-204ENST00000401473 ZMAT3Q9HA38 289 aaKnown RBP13.16□□□□□ -0.3
HMGA1-204ENST00000401473 SPACA1Q9HBV2 294 aa13.16□□□□□ -0.3
HMGA1-204ENST00000401473 FN1P02751 2386 aaKnown RBP13.15□□□□□ -0.3
HMGA1-204ENST00000401473 UBE2QL1A1L167 161 aa13.15□□□□□ -0.3
HMGA1-204ENST00000401473 METTL21EPA6NDL7 271 aa13.15□□□□□ -0.3
HMGA1-204ENST00000401473 MCRIP1C9JLW8 97 aa13.15□□□□□ -0.3
HMGA1-204ENST00000401473 CTDSP2O14595 271 aa13.15□□□□□ -0.3
HMGA1-204ENST00000401473 SOX6P35712 828 aa13.15□□□□□ -0.3
HMGA1-204ENST00000401473 RPL31P62899 125 aaKnown RBP13.15□□□□□ -0.3
HMGA1-204ENST00000401473 RSBN1Q5VWQ0 802 aaPredicted RBP13.15□□□□□ -0.3
HMGA1-204ENST00000401473 CD276Q5ZPR3 534 aa13.15□□□□□ -0.3
HMGA1-204ENST00000401473 OLFML2AQ68BL7 652 aa13.15□□□□□ -0.3
HMGA1-204ENST00000401473 TMEM200BQ69YZ2 307 aa13.15□□□□□ -0.3
HMGA1-204ENST00000401473 Q6ZTK2 550 aa13.15□□□□□ -0.3
HMGA1-204ENST00000401473 Q71RC1 249 aaPredicted RBP13.15□□□□□ -0.3
HMGA1-204ENST00000401473 OR56B1Q8NGI3 324 aa13.15□□□□□ -0.3
HMGA1-204ENST00000401473 OR10R2Q8NGX6 335 aa13.15□□□□□ -0.3
HMGA1-204ENST00000401473 PPP1R35Q8TAP8 253 aa13.15□□□□□ -0.3
HMGA1-204ENST00000401473 NEDD4LQ96PU5 975 aa13.15□□□□□ -0.3
HMGA1-204ENST00000401473 ABCG5Q9H222 651 aa13.15□□□□□ -0.3
HMGA1-204ENST00000401473 PLEKHJ1Q9NW61 149 aa13.15□□□□□ -0.3
HMGA1-204ENST00000401473 KIR2DS1A0A191URI9 304 aa13.14□□□□□ -0.31
HMGA1-204ENST00000401473 ECDO95905 644 aaPredicted RBP13.14□□□□□ -0.31
HMGA1-204ENST00000401473 ERP29P30040 261 aaKnown RBP13.14□□□□□ -0.31
HMGA1-204ENST00000401473 C11orf91Q3C1V1 193 aa13.14□□□□□ -0.31
HMGA1-204ENST00000401473 KRBOX4Q5JUW0 171 aa13.14□□□□□ -0.31
HMGA1-204ENST00000401473 TCF23Q7RTU1 214 aa13.14□□□□□ -0.31
HMGA1-204ENST00000401473 DTX3Q8N9I9 347 aa13.14□□□□□ -0.31
HMGA1-204ENST00000401473 C8orf46Q8TAG6 207 aa13.14□□□□□ -0.31
HMGA1-204ENST00000401473 ACOT12Q8WYK0 555 aa13.14□□□□□ -0.31
HMGA1-204ENST00000401473 CCDC59Q9P031 241 aaKnown RBP13.14□□□□□ -0.31
HMGA1-204ENST00000401473 ELF5Q9UKW6 265 aaPredicted RBP13.14□□□□□ -0.31
HMGA1-204ENST00000401473 NF1P21359 2839 aa13.14□□□□□ -0.31
HMGA1-204ENST00000401473 NAV3Q8IVL0 2385 aa13.14□□□□□ -0.31
HMGA1-204ENST00000401473 PPIAL4CA0A0B4J2A2 164 aa13.14□□□□□ -0.31
HMGA1-204ENST00000401473 IGHV2-70DA0A0C4DH43 119 aa13.14□□□□□ -0.31
HMGA1-204ENST00000401473 HPGDSO60760 199 aa13.14□□□□□ -0.31
HMGA1-204ENST00000401473 PPIAL4GP0DN37 164 aa13.14□□□□□ -0.31
HMGA1-204ENST00000401473 GNB3P16520 340 aa13.14□□□□□ -0.31
HMGA1-204ENST00000401473 ZNF16P17020 682 aaPredicted RBP13.14□□□□□ -0.31
HMGA1-204ENST00000401473 P2RX3P56373 397 aa13.14□□□□□ -0.31
HMGA1-204ENST00000401473 ERVFRD-1P60508 538 aa13.14□□□□□ -0.31
HMGA1-204ENST00000401473 PAX5Q02548 391 aa13.14□□□□□ -0.31
HMGA1-204ENST00000401473 CLEC9AQ6UXN8 241 aa13.14□□□□□ -0.31
HMGA1-204ENST00000401473 NUDT16L1Q9BRJ7 211 aaKnown RBP13.14□□□□□ -0.31
HMGA1-204ENST00000401473 PECRQ9BY49 303 aa13.14□□□□□ -0.31
HMGA1-204ENST00000401473 HSF4Q9ULV5 492 aa13.14□□□□□ -0.31
HMGA1-204ENST00000401473 INSIG2Q9Y5U4 225 aa13.14□□□□□ -0.31
HMGA1-204ENST00000401473 TRAV39A0A0B4J263 110 aa13.13□□□□□ -0.31
HMGA1-204ENST00000401473 CD5LO43866 347 aa13.13□□□□□ -0.31
HMGA1-204ENST00000401473 GLAP06280 429 aa13.13□□□□□ -0.31
HMGA1-204ENST00000401473 EIF4EP06730 217 aaKnown RBP13.13□□□□□ -0.31
HMGA1-204ENST00000401473 DYNC1I2Q13409 638 aaKnown RBP13.13□□□□□ -0.31
HMGA1-204ENST00000401473 ZNF273Q14593 569 aa13.13□□□□□ -0.31
HMGA1-204ENST00000401473 ZNF497Q6ZNH5 498 aa13.13□□□□□ -0.31
HMGA1-204ENST00000401473 C11orf42Q8N5U0 333 aa13.13□□□□□ -0.31
HMGA1-204ENST00000401473 NEK7Q8TDX7 302 aa13.13□□□□□ -0.31
HMGA1-204ENST00000401473 AP3S1Q92572 193 aa13.13□□□□□ -0.31
HMGA1-204ENST00000401473 RAB3CQ96E17 227 aa13.13□□□□□ -0.31
HMGA1-204ENST00000401473 KIF25Q9UIL4 384 aa13.13□□□□□ -0.31
HMGA1-204ENST00000401473 TRAV20A0A0B4J274 112 aa13.12□□□□□ -0.31
HMGA1-204ENST00000401473 AVPP01185 164 aa13.12□□□□□ -0.31
HMGA1-204ENST00000401473 MT-ND4P03905 459 aa13.12□□□□□ -0.31
HMGA1-204ENST00000401473 ELK1P19419 428 aa13.12□□□□□ -0.31
HMGA1-204ENST00000401473 CDK2P24941 298 aa13.12□□□□□ -0.31
HMGA1-204ENST00000401473 KCNJ3P48549 501 aa13.12□□□□□ -0.31
HMGA1-204ENST00000401473 DVL1P1P54792 670 aaPredicted RBP13.12□□□□□ -0.31
HMGA1-204ENST00000401473 ARF6P62330 175 aa13.12□□□□□ -0.31
HMGA1-204ENST00000401473 PAX8Q06710 450 aa13.12□□□□□ -0.31
HMGA1-204ENST00000401473 RBM39Q14498 530 aaKnown RBP13.12□□□□□ -0.31
HMGA1-204ENST00000401473 UBE2NLQ5JXB2 153 aa13.12□□□□□ -0.31
HMGA1-204ENST00000401473 FAHD2BQ6P2I3 314 aaPredicted RBP13.12□□□□□ -0.31
HMGA1-204ENST00000401473 Q6ZPA2 131 aa13.12□□□□□ -0.31
HMGA1-204ENST00000401473 GAPTQ8N292 157 aa13.12□□□□□ -0.31
HMGA1-204ENST00000401473 FAHD2AQ96GK7 314 aa13.12□□□□□ -0.31
HMGA1-204ENST00000401473 NXF2Q9GZY0 626 aaKnown RBP13.12□□□□□ -0.31
HMGA1-204ENST00000401473 MIXL1Q9H2W2 232 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms