RNA–Protein interactions for RNA: ENST00000401408.5

CLHC1-201, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLHC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-201ENST00000401408 NAV3Q8IVL0 2385 aa3.3□□□□□ -1.88
CLHC1-201ENST00000401408 A0A1W2PP11 408 aa3.3□□□□□ -1.88
CLHC1-201ENST00000401408 WDR27A2RRH5 827 aa3.3□□□□□ -1.88
CLHC1-201ENST00000401408 NKX2-6A6NCS4 301 aa3.3□□□□□ -1.88
CLHC1-201ENST00000401408 OR5B21A6NL26 309 aa3.3□□□□□ -1.88
CLHC1-201ENST00000401408 TMEM178BH3BS89 294 aa3.3□□□□□ -1.88
CLHC1-201ENST00000401408 CXCL13O43927 109 aa3.3□□□□□ -1.88
CLHC1-201ENST00000401408 SOX15O60248 233 aa3.3□□□□□ -1.88
CLHC1-201ENST00000401408 MPC1LP0DKB6 136 aa3.3□□□□□ -1.88
CLHC1-201ENST00000401408 GP1BBP13224 206 aa3.3□□□□□ -1.88
CLHC1-201ENST00000401408 HSD17B1P14061 328 aa3.3□□□□□ -1.88
CLHC1-201ENST00000401408 GLRXP35754 106 aa3.3□□□□□ -1.88
CLHC1-201ENST00000401408 GGT2P36268 569 aa3.3□□□□□ -1.88
CLHC1-201ENST00000401408 CCR2P41597 374 aa3.3□□□□□ -1.88
CLHC1-201ENST00000401408 REG1BP48304 166 aa3.3□□□□□ -1.88
CLHC1-201ENST00000401408 DLX1P56177 255 aa3.3□□□□□ -1.88
CLHC1-201ENST00000401408 FBXW4P57775 412 aa3.3□□□□□ -1.88
CLHC1-201ENST00000401408 PFN3P60673 137 aa3.3□□□□□ -1.88
CLHC1-201ENST00000401408 SNRPNP63162 240 aaKnown RBP3.3□□□□□ -1.88
CLHC1-201ENST00000401408 HIST1H3AP68431 136 aa3.3□□□□□ -1.88
CLHC1-201ENST00000401408 H3F3AP84243 136 aa3.3□□□□□ -1.88
CLHC1-201ENST00000401408 SP4Q02446 784 aa3.3□□□□□ -1.88
CLHC1-201ENST00000401408 TAF10Q12962 218 aa3.3□□□□□ -1.88
CLHC1-201ENST00000401408 GNMTQ14749 295 aa3.3□□□□□ -1.88
CLHC1-201ENST00000401408 TRIP6Q15654 476 aaKnown RBP3.3□□□□□ -1.88
CLHC1-201ENST00000401408 SRSF7Q16629 238 aaKnown RBP eCLIP3.3□□□□□ -1.88
CLHC1-201ENST00000401408 IZUMO4Q1ZYL8 232 aa3.3□□□□□ -1.88
CLHC1-201ENST00000401408 PARP15Q460N3 678 aa3.3□□□□□ -1.88
CLHC1-201ENST00000401408 RAB6CQ53S08 254 aa3.3□□□□□ -1.88
CLHC1-201ENST00000401408 OR10K2Q6IF99 312 aa3.3□□□□□ -1.88
CLHC1-201ENST00000401408 RWDD4Q6NW29 188 aaKnown RBP3.3□□□□□ -1.88
CLHC1-201ENST00000401408 TRMT10BQ6PF06 316 aaKnown RBP3.3□□□□□ -1.88
CLHC1-201ENST00000401408 KCTD18Q6PI47 426 aaPredicted RBP3.3□□□□□ -1.88
CLHC1-201ENST00000401408 SPSB3Q6PJ21 355 aa3.3□□□□□ -1.88
CLHC1-201ENST00000401408 Q6ZWC4 215 aa3.3□□□□□ -1.88
CLHC1-201ENST00000401408 HIST2H3AQ71DI3 136 aa3.3□□□□□ -1.88
CLHC1-201ENST00000401408 PIGZQ86VD9 579 aa3.3□□□□□ -1.88
CLHC1-201ENST00000401408 OSR2Q8N2R0 312 aa3.3□□□□□ -1.88
CLHC1-201ENST00000401408 TMEM86BQ8N661 226 aa3.3□□□□□ -1.88
CLHC1-201ENST00000401408 ZNF614Q8N883 585 aa3.3□□□□□ -1.88
CLHC1-201ENST00000401408 ZNF485Q8NCK3 441 aa3.3□□□□□ -1.88
CLHC1-201ENST00000401408 B3GALNT2Q8NCR0 500 aa3.3□□□□□ -1.88
CLHC1-201ENST00000401408 BEST4Q8NFU0 473 aa3.3□□□□□ -1.88
CLHC1-201ENST00000401408 KBTBD8Q8NFY9 601 aa3.3□□□□□ -1.88
CLHC1-201ENST00000401408 DCAKDQ8WVC6 231 aa3.3□□□□□ -1.88
CLHC1-201ENST00000401408 ASB13Q8WXK3 278 aa3.3□□□□□ -1.88
CLHC1-201ENST00000401408 DLX4Q92988 240 aaPredicted RBP3.3□□□□□ -1.88
CLHC1-201ENST00000401408 MS4A4EQ96PG1 132 aa3.3□□□□□ -1.88
CLHC1-201ENST00000401408 NEDD4LQ96PU5 975 aa3.3□□□□□ -1.88
CLHC1-201ENST00000401408 OR7D2Q96RA2 312 aa3.3□□□□□ -1.88
CLHC1-201ENST00000401408 FCRL5Q96RD9 977 aa3.3□□□□□ -1.88
CLHC1-201ENST00000401408 GPER1Q99527 375 aa3.3□□□□□ -1.88
CLHC1-201ENST00000401408 SLC25A39Q9BZJ4 359 aaPredicted RBP3.3□□□□□ -1.88
CLHC1-201ENST00000401408 RAB6CQ9H0N0 254 aa3.3□□□□□ -1.88
CLHC1-201ENST00000401408 RBKSQ9H477 322 aa3.3□□□□□ -1.88
CLHC1-201ENST00000401408 RNF167Q9H6Y7 350 aa3.3□□□□□ -1.88
CLHC1-201ENST00000401408 AURKAIP1Q9NWT8 199 aaPredicted RBP3.3□□□□□ -1.88
CLHC1-201ENST00000401408 IDI2-AS1Q9NZ38 188 aa3.3□□□□□ -1.88
CLHC1-201ENST00000401408 ZFP30Q9Y2G7 519 aa3.3□□□□□ -1.88
CLHC1-201ENST00000401408 CARHSP1Q9Y2V2 147 aaKnown RBP3.3□□□□□ -1.88
CLHC1-201ENST00000401408 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.3□□□□□ -1.88
CLHC1-201ENST00000401408 EXOSC1Q9Y3B2 195 aaKnown RBP3.3□□□□□ -1.88
CLHC1-201ENST00000401408 U3KQ87 197 aa3.3□□□□□ -1.88
CLHC1-201ENST00000401408 PTPRJQ12913 1337 aa3.3□□□□□ -1.88
CLHC1-201ENST00000401408 TRIP11Q15643 1979 aa3.3□□□□□ -1.88
CLHC1-201ENST00000401408 MYO18AQ92614 2054 aaKnown RBP3.3□□□□□ -1.88
CLHC1-201ENST00000401408 LINC00862A6NCI5 91 aa3.29□□□□□ -1.88
CLHC1-201ENST00000401408 USP27XA6NNY8 438 aa3.29□□□□□ -1.88
CLHC1-201ENST00000401408 F5H5K5 113 aa3.29□□□□□ -1.88
CLHC1-201ENST00000401408 F8W735 103 aaPredicted RBP3.29□□□□□ -1.88
CLHC1-201ENST00000401408 GFYI3L273 518 aa3.29□□□□□ -1.88
CLHC1-201ENST00000401408 ZNF593O00488 134 aaPredicted RBP3.29□□□□□ -1.88
CLHC1-201ENST00000401408 FCN1O00602 326 aa3.29□□□□□ -1.88
CLHC1-201ENST00000401408 PRRG2O14669 202 aa3.29□□□□□ -1.88
CLHC1-201ENST00000401408 CCL16O15467 120 aa3.29□□□□□ -1.88
CLHC1-201ENST00000401408 WISP2O76076 250 aa3.29□□□□□ -1.88
CLHC1-201ENST00000401408 SOX14O95416 240 aa3.29□□□□□ -1.88
CLHC1-201ENST00000401408 APOHP02749 345 aaPredicted RBP3.29□□□□□ -1.88
CLHC1-201ENST00000401408 MYOD1P15172 320 aa3.29□□□□□ -1.88
CLHC1-201ENST00000401408 GABRG2P18507 467 aa3.29□□□□□ -1.88
CLHC1-201ENST00000401408 MYL12AP19105 171 aa3.29□□□□□ -1.88
CLHC1-201ENST00000401408 PCSK6P29122 969 aa3.29□□□□□ -1.88
CLHC1-201ENST00000401408 ADMP35318 185 aa3.29□□□□□ -1.88
CLHC1-201ENST00000401408 ARL2P36404 184 aa3.29□□□□□ -1.88
CLHC1-201ENST00000401408 RPL4P36578 427 aaKnown RBP3.29□□□□□ -1.88
CLHC1-201ENST00000401408 MDH2P40926 338 aaKnown RBP3.29□□□□□ -1.88
CLHC1-201ENST00000401408 NR4A2P43354 598 aa3.29□□□□□ -1.88
CLHC1-201ENST00000401408 RORCP51449 518 aa3.29□□□□□ -1.88
CLHC1-201ENST00000401408 HGFACQ04756 655 aa3.29□□□□□ -1.88
CLHC1-201ENST00000401408 OR5I1Q13606 314 aa3.29□□□□□ -1.88
CLHC1-201ENST00000401408 EIF2B1Q14232 305 aaKnown RBP3.29□□□□□ -1.88
CLHC1-201ENST00000401408 MICAQ29983 383 aa3.29□□□□□ -1.88
CLHC1-201ENST00000401408 ATP6AP1LQ52LC2 224 aa3.29□□□□□ -1.88
CLHC1-201ENST00000401408 NCMAPQ5T1S8 102 aa3.29□□□□□ -1.88
CLHC1-201ENST00000401408 FAM162BQ5T6X4 162 aa3.29□□□□□ -1.88
CLHC1-201ENST00000401408 SFXN4Q6P4A7 337 aa3.29□□□□□ -1.88
CLHC1-201ENST00000401408 TNFAIP8L2Q6P589 184 aaPredicted RBP3.29□□□□□ -1.88
CLHC1-201ENST00000401408 PRSS41Q7RTY9 318 aa3.29□□□□□ -1.88
CLHC1-201ENST00000401408 C6orf120Q7Z4R8 191 aa3.29□□□□□ -1.88
CLHC1-201ENST00000401408 BAP18Q8IXM2 172 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms