RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 MEGF10Q96KG7 1140 aa9.85□□□□□ -0.83
SKA3-203ENST00000400018 PECRQ9BY49 303 aa9.85□□□□□ -0.83
SKA3-203ENST00000400018 REG4Q9BYZ8 158 aa9.85□□□□□ -0.83
SKA3-203ENST00000400018 DYNLRB1Q9NP97 96 aa9.85□□□□□ -0.83
SKA3-203ENST00000400018 AK3Q9UIJ7 227 aa9.85□□□□□ -0.83
SKA3-203ENST00000400018 FAM240BA0A1B0GVZ2 78 aa9.84□□□□□ -0.83
SKA3-203ENST00000400018 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.84□□□□□ -0.83
SKA3-203ENST00000400018 SIGLEC5O15389 551 aa9.84□□□□□ -0.83
SKA3-203ENST00000400018 PSPNO60542 156 aa9.84□□□□□ -0.83
SKA3-203ENST00000400018 PMP2P02689 132 aa9.84□□□□□ -0.83
SKA3-203ENST00000400018 FABP1P07148 127 aa9.84□□□□□ -0.83
SKA3-203ENST00000400018 GABRA2P47869 451 aa9.84□□□□□ -0.83
SKA3-203ENST00000400018 INPP1P49441 399 aa9.84□□□□□ -0.83
SKA3-203ENST00000400018 DLX1P56177 255 aa9.84□□□□□ -0.83
SKA3-203ENST00000400018 FCN2Q15485 313 aa9.84□□□□□ -0.83
SKA3-203ENST00000400018 ZNF808Q8N4W9 903 aaPredicted RBP9.84□□□□□ -0.83
SKA3-203ENST00000400018 GCSAMQ8N6F7 178 aa9.84□□□□□ -0.83
SKA3-203ENST00000400018 THRSPQ92748 146 aa9.84□□□□□ -0.83
SKA3-203ENST00000400018 GSX2Q9BZM3 304 aa9.84□□□□□ -0.83
SKA3-203ENST00000400018 GCM1Q9NP62 436 aa9.84□□□□□ -0.83
SKA3-203ENST00000400018 ZNF222Q9UK12 451 aa9.84□□□□□ -0.83
SKA3-203ENST00000400018 ADAM30Q9UKF2 790 aa9.84□□□□□ -0.83
SKA3-203ENST00000400018 ETV7Q9Y603 341 aa9.84□□□□□ -0.83
SKA3-203ENST00000400018 RAI1Q7Z5J4 1906 aaPredicted RBP9.84□□□□□ -0.83
SKA3-203ENST00000400018 TRBV23-1A0A0A0MS06 115 aa9.84□□□□□ -0.83
SKA3-203ENST00000400018 GLRA1P23415 457 aa9.84□□□□□ -0.83
SKA3-203ENST00000400018 COL8A2P25067 703 aa9.84□□□□□ -0.83
SKA3-203ENST00000400018 RBM11P57052 281 aaKnown RBP9.84□□□□□ -0.83
SKA3-203ENST00000400018 GPR176Q14439 515 aa9.84□□□□□ -0.83
SKA3-203ENST00000400018 RAB12Q6IQ22 244 aa9.84□□□□□ -0.83
SKA3-203ENST00000400018 PYHIN1Q6K0P9 492 aa9.84□□□□□ -0.83
SKA3-203ENST00000400018 FAM169BQ8N8A8 192 aa9.84□□□□□ -0.83
SKA3-203ENST00000400018 NANPQ8TBE9 248 aa9.84□□□□□ -0.83
SKA3-203ENST00000400018 C10orf35Q96D05 121 aa9.84□□□□□ -0.83
SKA3-203ENST00000400018 GPHA2Q96T91 129 aa9.84□□□□□ -0.83
SKA3-203ENST00000400018 CST11Q9H112 138 aa9.84□□□□□ -0.83
SKA3-203ENST00000400018 ZNF442Q9H7R0 627 aa9.84□□□□□ -0.83
SKA3-203ENST00000400018 NAV2Q8IVL1 2488 aa9.84□□□□□ -0.83
SKA3-203ENST00000400018 ST8SIA5O15466 376 aa9.84□□□□□ -0.84
SKA3-203ENST00000400018 CD8AP01732 235 aa9.84□□□□□ -0.84
SKA3-203ENST00000400018 Q3ZCU0 254 aa9.84□□□□□ -0.84
SKA3-203ENST00000400018 MKXQ8IYA7 352 aa9.84□□□□□ -0.84
SKA3-203ENST00000400018 FAM58AQ8N1B3 248 aa9.84□□□□□ -0.84
SKA3-203ENST00000400018 RBM14Q96PK6 669 aaKnown RBP9.84□□□□□ -0.84
SKA3-203ENST00000400018 TRAV24A0A0B4J272 114 aa9.83□□□□□ -0.84
SKA3-203ENST00000400018 METTL21EPA6NDL7 271 aa9.83□□□□□ -0.84
SKA3-203ENST00000400018 FAM74A7A6NL05 159 aa9.83□□□□□ -0.84
SKA3-203ENST00000400018 M0R233 179 aa9.83□□□□□ -0.84
SKA3-203ENST00000400018 HIST1H1DP16402 221 aaKnown RBP9.83□□□□□ -0.84
SKA3-203ENST00000400018 RCC1P18754 421 aaPredicted RBP9.83□□□□□ -0.84
SKA3-203ENST00000400018 GIFP27352 417 aa9.83□□□□□ -0.84
SKA3-203ENST00000400018 PRSS3P35030 304 aa9.83□□□□□ -0.84
SKA3-203ENST00000400018 EDDM3AQ14507 147 aa9.83□□□□□ -0.84
SKA3-203ENST00000400018 LGALSLQ3ZCW2 172 aaPredicted RBP9.83□□□□□ -0.84
SKA3-203ENST00000400018 ZNF672Q499Z4 452 aaPredicted RBP9.83□□□□□ -0.84
SKA3-203ENST00000400018 FAM74A3Q4VXF1 159 aa9.83□□□□□ -0.84
SKA3-203ENST00000400018 BEX5Q5H9J7 111 aa9.83□□□□□ -0.84
SKA3-203ENST00000400018 UTF1Q5T230 341 aa9.83□□□□□ -0.84
SKA3-203ENST00000400018 AVPI1Q5T686 147 aa9.83□□□□□ -0.84
SKA3-203ENST00000400018 ZNF573Q86YE8 665 aa9.83□□□□□ -0.84
SKA3-203ENST00000400018 TOMM5Q8N4H5 51 aa9.83□□□□□ -0.84
SKA3-203ENST00000400018 BEST4Q8NFU0 473 aa9.83□□□□□ -0.84
SKA3-203ENST00000400018 FCAMRQ8WWV6 532 aa9.83□□□□□ -0.84
SKA3-203ENST00000400018 RAB40AQ8WXH6 277 aa9.83□□□□□ -0.84
SKA3-203ENST00000400018 CXXC4Q9H2H0 198 aa9.83□□□□□ -0.84
SKA3-203ENST00000400018 MALRD1Q5VYJ5 2156 aa9.83□□□□□ -0.84
SKA3-203ENST00000400018 FLNBO75369 2602 aaKnown RBP9.83□□□□□ -0.84
SKA3-203ENST00000400018 J3QT63 122 aa9.83□□□□□ -0.84
SKA3-203ENST00000400018 DNASE2O00115 360 aaPredicted RBP9.83□□□□□ -0.84
SKA3-203ENST00000400018 GYPAP02724 150 aa9.83□□□□□ -0.84
SKA3-203ENST00000400018 PI3P19957 117 aa9.83□□□□□ -0.84
SKA3-203ENST00000400018 AMY2BP19961 511 aa9.83□□□□□ -0.84
SKA3-203ENST00000400018 BTCP35070 178 aa9.83□□□□□ -0.84
SKA3-203ENST00000400018 KRTAP10-9P60411 292 aa9.83□□□□□ -0.84
SKA3-203ENST00000400018 ZNF124Q15973 351 aa9.83□□□□□ -0.84
SKA3-203ENST00000400018 LTC4SQ16873 150 aa9.83□□□□□ -0.84
SKA3-203ENST00000400018 FAM76BQ5HYJ3 339 aa9.83□□□□□ -0.84
SKA3-203ENST00000400018 SMIM4Q8WVI0 70 aa9.83□□□□□ -0.84
SKA3-203ENST00000400018 PPP1R3CQ9UQK1 317 aa9.83□□□□□ -0.84
SKA3-203ENST00000400018 TLN2Q9Y4G6 2542 aa9.82□□□□□ -0.84
SKA3-203ENST00000400018 LRP5LA4QPB2 252 aa9.82□□□□□ -0.84
SKA3-203ENST00000400018 MFSD2BA6NFX1 497 aa9.82□□□□□ -0.84
SKA3-203ENST00000400018 C17orf100A8MU93 164 aa9.82□□□□□ -0.84
SKA3-203ENST00000400018 OR2H2O95918 312 aa9.82□□□□□ -0.84
SKA3-203ENST00000400018 CD177Q8N6Q3 437 aa9.82□□□□□ -0.84
SKA3-203ENST00000400018 NUP37Q8NFH4 326 aa9.82□□□□□ -0.84
SKA3-203ENST00000400018 PLPPR1Q8TBJ4 325 aa9.82□□□□□ -0.84
SKA3-203ENST00000400018 CXorf58Q96LI9 332 aa9.82□□□□□ -0.84
SKA3-203ENST00000400018 NGBQ9NPG2 151 aa9.82□□□□□ -0.84
SKA3-203ENST00000400018 GLS2Q9UI32 602 aa9.82□□□□□ -0.84
SKA3-203ENST00000400018 OR5B21A6NL26 309 aa9.82□□□□□ -0.84
SKA3-203ENST00000400018 INMT-MINDY4F8WBC2 141 aa9.82□□□□□ -0.84
SKA3-203ENST00000400018 MFNGO00587 321 aa9.82□□□□□ -0.84
SKA3-203ENST00000400018 APOC3P02656 99 aa9.82□□□□□ -0.84
SKA3-203ENST00000400018 SELENOVP59797 346 aa9.82□□□□□ -0.84
SKA3-203ENST00000400018 AESQ08117 197 aa9.82□□□□□ -0.84
SKA3-203ENST00000400018 SCGB2B2Q4G0G5 96 aa9.82□□□□□ -0.84
SKA3-203ENST00000400018 SUMF2Q8NBJ7 301 aa9.82□□□□□ -0.84
SKA3-203ENST00000400018 URM1Q9BTM9 101 aaKnown RBP9.82□□□□□ -0.84
SKA3-203ENST00000400018 CACNG6Q9BXT2 260 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms