RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 ARHGDIBP52566 201 aa10.79□□□□□ -0.68
VCX3A-202ENST00000398729 BDH1Q02338 343 aa10.79□□□□□ -0.68
VCX3A-202ENST00000398729 BAIAP2L2Q6UXY1 529 aa10.79□□□□□ -0.68
VCX3A-202ENST00000398729 ZNF565Q8N9K5 539 aa10.79□□□□□ -0.68
VCX3A-202ENST00000398729 Q8NFD4 153 aa10.79□□□□□ -0.68
VCX3A-202ENST00000398729 OR51T1Q8NGJ9 327 aa10.79□□□□□ -0.68
VCX3A-202ENST00000398729 OR10K1Q8NGX5 313 aa10.79□□□□□ -0.68
VCX3A-202ENST00000398729 CREB3L1Q96BA8 519 aa10.79□□□□□ -0.68
VCX3A-202ENST00000398729 BARHL1Q9BZE3 327 aa10.79□□□□□ -0.68
VCX3A-202ENST00000398729 PRSS22Q9GZN4 317 aa10.79□□□□□ -0.68
VCX3A-202ENST00000398729 PPIL3Q9H2H8 161 aaKnown RBP10.79□□□□□ -0.68
VCX3A-202ENST00000398729 ZNF702PQ9H963 129 aa10.79□□□□□ -0.68
VCX3A-202ENST00000398729 SIRT4Q9Y6E7 314 aaPredicted RBP10.79□□□□□ -0.68
VCX3A-202ENST00000398729 MEIKINA0A087WXM9 373 aa10.78□□□□□ -0.68
VCX3A-202ENST00000398729 TRAV24A0A0B4J272 114 aa10.78□□□□□ -0.68
VCX3A-202ENST00000398729 KBTBD11-OT1A0A1B0GTJ5 212 aa10.78□□□□□ -0.68
VCX3A-202ENST00000398729 FAM172BPA6NC97 362 aa10.78□□□□□ -0.68
VCX3A-202ENST00000398729 EFCAB10A6NFE3 127 aa10.78□□□□□ -0.68
VCX3A-202ENST00000398729 LEUTXA8MZ59 168 aa10.78□□□□□ -0.68
VCX3A-202ENST00000398729 IGLV1-47P01700 117 aa10.78□□□□□ -0.68
VCX3A-202ENST00000398729 CSTBP04080 98 aaKnown RBP10.78□□□□□ -0.68
VCX3A-202ENST00000398729 JUNBP17275 347 aaPredicted RBP10.78□□□□□ -0.68
VCX3A-202ENST00000398729 BDKRB2P30411 391 aa10.78□□□□□ -0.68
VCX3A-202ENST00000398729 BRS3P32247 399 aa10.78□□□□□ -0.68
VCX3A-202ENST00000398729 ZNF93P35789 620 aaPredicted RBP10.78□□□□□ -0.68
VCX3A-202ENST00000398729 GDNFP39905 211 aa10.78□□□□□ -0.68
VCX3A-202ENST00000398729 CAPGP40121 348 aa10.78□□□□□ -0.68
VCX3A-202ENST00000398729 CEACAM3P40198 252 aa10.78□□□□□ -0.68
VCX3A-202ENST00000398729 GLP1RP43220 463 aa10.78□□□□□ -0.68
VCX3A-202ENST00000398729 OR3A4PP47883 348 aa10.78□□□□□ -0.68
VCX3A-202ENST00000398729 KCNJ3P48549 501 aa10.78□□□□□ -0.68
VCX3A-202ENST00000398729 PRRX1P54821 245 aa10.78□□□□□ -0.68
VCX3A-202ENST00000398729 ST3GAL4Q11206 333 aa10.78□□□□□ -0.68
VCX3A-202ENST00000398729 C17orf58Q2M2W7 97 aa10.78□□□□□ -0.68
VCX3A-202ENST00000398729 PIGYQ3MUY2 71 aa10.78□□□□□ -0.68
VCX3A-202ENST00000398729 YIF1BQ5BJH7 314 aa10.78□□□□□ -0.68
VCX3A-202ENST00000398729 ARSJQ5FYB0 599 aaPredicted RBP10.78□□□□□ -0.68
VCX3A-202ENST00000398729 DDI2Q5TDH0 399 aa10.78□□□□□ -0.68
VCX3A-202ENST00000398729 DMKNQ6E0U4 476 aaPredicted RBP10.78□□□□□ -0.68
VCX3A-202ENST00000398729 ASCL4Q6XD76 172 aa10.78□□□□□ -0.68
VCX3A-202ENST00000398729 C8orf59Q8N0T1 100 aaPredicted RBP10.78□□□□□ -0.68
VCX3A-202ENST00000398729 Q8N2B8 174 aa10.78□□□□□ -0.68
VCX3A-202ENST00000398729 FAM110DQ8TAY7 271 aaPredicted RBP10.78□□□□□ -0.68
VCX3A-202ENST00000398729 CFHR4Q92496 578 aa10.78□□□□□ -0.68
VCX3A-202ENST00000398729 GGHQ92820 318 aa10.78□□□□□ -0.68
VCX3A-202ENST00000398729 GHSRQ92847 366 aa10.78□□□□□ -0.68
VCX3A-202ENST00000398729 S100A13Q99584 98 aa10.78□□□□□ -0.68
VCX3A-202ENST00000398729 METTL9Q9H1A3 318 aa10.78□□□□□ -0.68
VCX3A-202ENST00000398729 NCOR1P1Q9H4R4 102 aa10.78□□□□□ -0.68
VCX3A-202ENST00000398729 ZNF286AQ9HBT8 521 aa10.78□□□□□ -0.68
VCX3A-202ENST00000398729 PAK1IP1Q9NWT1 392 aaPredicted RBP10.78□□□□□ -0.68
VCX3A-202ENST00000398729 CKLFQ9UBR5 152 aa10.78□□□□□ -0.68
VCX3A-202ENST00000398729 ING4Q9UNL4 249 aa10.78□□□□□ -0.68
VCX3A-202ENST00000398729 A0A087X0M5 115 aa10.77□□□□□ -0.69
VCX3A-202ENST00000398729 TRBV5-5A0A0J9YX44 114 aa10.77□□□□□ -0.69
VCX3A-202ENST00000398729 A0A1B0GX30 115 aa10.77□□□□□ -0.69
VCX3A-202ENST00000398729 FAM90A22PA8MWA6 464 aa10.77□□□□□ -0.69
VCX3A-202ENST00000398729 PEX14O75381 377 aa10.77□□□□□ -0.69
VCX3A-202ENST00000398729 CDRT1O95170 752 aa10.77□□□□□ -0.69
VCX3A-202ENST00000398729 LALBAP00709 142 aa10.77□□□□□ -0.69
VCX3A-202ENST00000398729 C21orf33P30042 268 aaPredicted RBP10.77□□□□□ -0.69
VCX3A-202ENST00000398729 TAS2R43P59537 309 aa10.77□□□□□ -0.69
VCX3A-202ENST00000398729 RIPK1Q13546 671 aa10.77□□□□□ -0.69
VCX3A-202ENST00000398729 HABP2Q14520 560 aaPredicted RBP10.77□□□□□ -0.69
VCX3A-202ENST00000398729 HLA-DRB5Q30154 266 aa10.77□□□□□ -0.69
VCX3A-202ENST00000398729 Q499Y3 187 aa10.77□□□□□ -0.69
VCX3A-202ENST00000398729 OSR2Q8N2R0 312 aa10.77□□□□□ -0.69
VCX3A-202ENST00000398729 C11orf44Q8N8P7 122 aa10.77□□□□□ -0.69
VCX3A-202ENST00000398729 OR13C5Q8NGS8 318 aa10.77□□□□□ -0.69
VCX3A-202ENST00000398729 AKR1E2Q96JD6 320 aa10.77□□□□□ -0.69
VCX3A-202ENST00000398729 PCDHB16Q9NRJ7 776 aa10.77□□□□□ -0.69
VCX3A-202ENST00000398729 SERTAD4Q9NUC0 356 aa10.77□□□□□ -0.69
VCX3A-202ENST00000398729 IL36GQ9NZH8 169 aa10.77□□□□□ -0.69
VCX3A-202ENST00000398729 CNOT2Q9NZN8 540 aaKnown RBP10.77□□□□□ -0.69
VCX3A-202ENST00000398729 KIF25Q9UIL4 384 aa10.77□□□□□ -0.69
VCX3A-202ENST00000398729 ST3GAL6Q9Y274 331 aa10.77□□□□□ -0.69
VCX3A-202ENST00000398729 TENM3Q9P273 2699 aa10.76□□□□□ -0.69
VCX3A-202ENST00000398729 BUB1B-PAK6H3BSN5 160 aa10.76□□□□□ -0.69
VCX3A-202ENST00000398729 GNAO1P09471 354 aa10.76□□□□□ -0.69
VCX3A-202ENST00000398729 CGB3P0DN86 165 aa10.76□□□□□ -0.69
VCX3A-202ENST00000398729 CGB7P0DN87 165 aa10.76□□□□□ -0.69
VCX3A-202ENST00000398729 NFYBP25208 207 aa10.76□□□□□ -0.69
VCX3A-202ENST00000398729 PAX5Q02548 391 aa10.76□□□□□ -0.69
VCX3A-202ENST00000398729 RBM39Q14498 530 aaKnown RBP10.76□□□□□ -0.69
VCX3A-202ENST00000398729 NHLRC3Q5JS37 347 aa10.76□□□□□ -0.69
VCX3A-202ENST00000398729 OGFRL1Q5TC84 451 aaPredicted RBP10.76□□□□□ -0.69
VCX3A-202ENST00000398729 C16orf82Q7Z2V1 217 aa10.76□□□□□ -0.69
VCX3A-202ENST00000398729 LINC00596Q86U02 117 aa10.76□□□□□ -0.69
VCX3A-202ENST00000398729 ZFP41Q8N8Y5 198 aa10.76□□□□□ -0.69
VCX3A-202ENST00000398729 ZNF485Q8NCK3 441 aa10.76□□□□□ -0.69
VCX3A-202ENST00000398729 OR13A1Q8NGR1 328 aa10.76□□□□□ -0.69
VCX3A-202ENST00000398729 OR9G1Q8NH87 305 aa10.76□□□□□ -0.69
VCX3A-202ENST00000398729 CAPSLQ8WWF8 208 aa10.76□□□□□ -0.69
VCX3A-202ENST00000398729 ORAI1Q96D31 301 aa10.76□□□□□ -0.69
VCX3A-202ENST00000398729 KIRREL1Q96J84 757 aa10.76□□□□□ -0.69
VCX3A-202ENST00000398729 PGLYRP3Q96LB9 341 aa10.76□□□□□ -0.69
VCX3A-202ENST00000398729 ZNF184Q99676 751 aaPredicted RBP10.76□□□□□ -0.69
VCX3A-202ENST00000398729 VCXQ9H320 206 aa10.76□□□□□ -0.69
VCX3A-202ENST00000398729 IFT22Q9H7X7 185 aa10.76□□□□□ -0.69
VCX3A-202ENST00000398729 CALYQ9NYX4 217 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms