RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 UTF1Q5T230 341 aa12.9□□□□□ -0.34
MBD1-207ENST00000398488 ATAD3CQ5T2N8 411 aa12.9□□□□□ -0.34
MBD1-207ENST00000398488 RSBN1Q5VWQ0 802 aaPredicted RBP12.9□□□□□ -0.34
MBD1-207ENST00000398488 ZNF782Q6ZMW2 699 aaPredicted RBP12.9□□□□□ -0.34
MBD1-207ENST00000398488 C1orf122Q6ZSJ8 110 aa12.9□□□□□ -0.34
MBD1-207ENST00000398488 PIP4P2Q8N4L2 257 aa12.9□□□□□ -0.34
MBD1-207ENST00000398488 DYRK2Q92630 601 aa12.9□□□□□ -0.34
MBD1-207ENST00000398488 RCC2Q9P258 522 aaKnown RBP12.9□□□□□ -0.34
MBD1-207ENST00000398488 GHRLQ9UBU3 117 aa12.9□□□□□ -0.34
MBD1-207ENST00000398488 KIF25Q9UIL4 384 aa12.9□□□□□ -0.34
MBD1-207ENST00000398488 IGHV1-69DA0A0B4J2H0 117 aa12.89□□□□□ -0.35
MBD1-207ENST00000398488 ODAMA1E959 279 aa12.89□□□□□ -0.35
MBD1-207ENST00000398488 LDLRAD4O15165 306 aa12.89□□□□□ -0.35
MBD1-207ENST00000398488 BPNT1O95861 308 aa12.89□□□□□ -0.35
MBD1-207ENST00000398488 IGHV1-69P01742 117 aa12.89□□□□□ -0.35
MBD1-207ENST00000398488 ZNF728P0DKX0 622 aa12.89□□□□□ -0.35
MBD1-207ENST00000398488 RAB3BP20337 219 aa12.89□□□□□ -0.35
MBD1-207ENST00000398488 PRTN3P24158 256 aa12.89□□□□□ -0.35
MBD1-207ENST00000398488 MYL9P24844 172 aa12.89□□□□□ -0.35
MBD1-207ENST00000398488 SDC2P34741 201 aa12.89□□□□□ -0.35
MBD1-207ENST00000398488 RPS27AP62979 156 aaKnown RBP12.89□□□□□ -0.35
MBD1-207ENST00000398488 MEF2CQ06413 473 aaPredicted RBP12.89□□□□□ -0.35
MBD1-207ENST00000398488 MPV17LQ2QL34 196 aa12.89□□□□□ -0.35
MBD1-207ENST00000398488 C2orf76Q3KRA6 126 aa12.89□□□□□ -0.35
MBD1-207ENST00000398488 KIAA2026Q5HYC2 2103 aa12.89□□□□□ -0.35
MBD1-207ENST00000398488 PPP1R35Q8TAP8 253 aa12.89□□□□□ -0.35
MBD1-207ENST00000398488 FAM3DQ96BQ1 224 aa12.89□□□□□ -0.35
MBD1-207ENST00000398488 MRPS24Q96EL2 167 aaKnown RBP12.89□□□□□ -0.35
MBD1-207ENST00000398488 LPAR5Q9H1C0 372 aa12.89□□□□□ -0.35
MBD1-207ENST00000398488 OCEL1Q9H607 264 aa12.89□□□□□ -0.35
MBD1-207ENST00000398488 UNKLQ9H9P5 680 aaKnown RBP12.89□□□□□ -0.35
MBD1-207ENST00000398488 PCDHB16Q9NRJ7 776 aa12.89□□□□□ -0.35
MBD1-207ENST00000398488 FBN1P35555 2871 aaKnown RBP12.89□□□□□ -0.35
MBD1-207ENST00000398488 hADV38S2A0JD32 116 aa12.88□□□□□ -0.35
MBD1-207ENST00000398488 IFITM5A6NNB3 132 aa12.88□□□□□ -0.35
MBD1-207ENST00000398488 UBBP0CG47 229 aa12.88□□□□□ -0.35
MBD1-207ENST00000398488 CGB3P0DN86 165 aa12.88□□□□□ -0.35
MBD1-207ENST00000398488 CGB7P0DN87 165 aa12.88□□□□□ -0.35
MBD1-207ENST00000398488 ARSBP15848 533 aa12.88□□□□□ -0.35
MBD1-207ENST00000398488 EFNB2P52799 333 aa12.88□□□□□ -0.35
MBD1-207ENST00000398488 LSM3P62310 102 aaKnown RBP12.88□□□□□ -0.35
MBD1-207ENST00000398488 MXD1Q05195 221 aa12.88□□□□□ -0.35
MBD1-207ENST00000398488 LINC00596Q86U02 117 aa12.88□□□□□ -0.35
MBD1-207ENST00000398488 CMTM4Q8IZR5 234 aa12.88□□□□□ -0.35
MBD1-207ENST00000398488 OR13A1Q8NGR1 328 aa12.88□□□□□ -0.35
MBD1-207ENST00000398488 OR13F1Q8NGS4 319 aa12.88□□□□□ -0.35
MBD1-207ENST00000398488 NAA50Q9GZZ1 169 aaKnown RBP12.88□□□□□ -0.35
MBD1-207ENST00000398488 METTL8Q9H825 291 aaKnown RBP12.88□□□□□ -0.35
MBD1-207ENST00000398488 ESM1Q9NQ30 184 aa12.88□□□□□ -0.35
MBD1-207ENST00000398488 STEAP1Q9UHE8 339 aa12.88□□□□□ -0.35
MBD1-207ENST00000398488 LINC00312Q9Y6C7 94 aa12.88□□□□□ -0.35
MBD1-207ENST00000398488 TMEM272A0A1B0GTI8 110 aa12.88□□□□□ -0.35
MBD1-207ENST00000398488 PDCD5O14737 125 aa12.88□□□□□ -0.35
MBD1-207ENST00000398488 VENTXO95231 258 aa12.88□□□□□ -0.35
MBD1-207ENST00000398488 TFAP2AP05549 437 aa12.88□□□□□ -0.35
MBD1-207ENST00000398488 C17orf58Q2M2W7 97 aa12.88□□□□□ -0.35
MBD1-207ENST00000398488 DEFB112Q30KQ8 113 aa12.88□□□□□ -0.35
MBD1-207ENST00000398488 GPR157Q5UAW9 335 aa12.88□□□□□ -0.35
MBD1-207ENST00000398488 RAB12Q6IQ22 244 aa12.88□□□□□ -0.35
MBD1-207ENST00000398488 C9orf139Q6ZV77 190 aa12.88□□□□□ -0.35
MBD1-207ENST00000398488 C5orf24Q7Z6I8 188 aa12.88□□□□□ -0.35
MBD1-207ENST00000398488 SIGLECL1Q8N7X8 197 aa12.88□□□□□ -0.35
MBD1-207ENST00000398488 KCNG3Q8TAE7 436 aa12.88□□□□□ -0.35
MBD1-207ENST00000398488 C17orf50Q8WW18 174 aa12.88□□□□□ -0.35
MBD1-207ENST00000398488 CORO2AQ92828 525 aa12.88□□□□□ -0.35
MBD1-207ENST00000398488 AJUBAQ96IF1 538 aa12.88□□□□□ -0.35
MBD1-207ENST00000398488 ZNF714Q96N38 554 aa12.88□□□□□ -0.35
MBD1-207ENST00000398488 FUNDC2Q9BWH2 189 aa12.88□□□□□ -0.35
MBD1-207ENST00000398488 TM2D1Q9BX74 207 aa12.88□□□□□ -0.35
MBD1-207ENST00000398488 TMEM59Q9BXS4 323 aa12.88□□□□□ -0.35
MBD1-207ENST00000398488 MS4A7Q9GZW8 240 aaPredicted RBP12.88□□□□□ -0.35
MBD1-207ENST00000398488 CST11Q9H112 138 aa12.88□□□□□ -0.35
MBD1-207ENST00000398488 VCX3AQ9NNX9 186 aa12.88□□□□□ -0.35
MBD1-207ENST00000398488 PEX16Q9Y5Y5 336 aa12.88□□□□□ -0.35
MBD1-207ENST00000398488 UBE2QL1A1L167 161 aa12.87□□□□□ -0.35
MBD1-207ENST00000398488 FOXI3A8MTJ6 420 aaPredicted RBP12.87□□□□□ -0.35
MBD1-207ENST00000398488 SOCS1O15524 211 aa12.87□□□□□ -0.35
MBD1-207ENST00000398488 OMGP23515 440 aa12.87□□□□□ -0.35
MBD1-207ENST00000398488 COX7A1P24310 79 aa12.87□□□□□ -0.35
MBD1-207ENST00000398488 PAX6P26367 422 aa12.87□□□□□ -0.35
MBD1-207ENST00000398488 CFPP27918 469 aa12.87□□□□□ -0.35
MBD1-207ENST00000398488 ALDH3B2P48448 385 aa12.87□□□□□ -0.35
MBD1-207ENST00000398488 PRAMEF5Q5TYX0 476 aa12.87□□□□□ -0.35
MBD1-207ENST00000398488 TEX29Q8N6K0 151 aa12.87□□□□□ -0.35
MBD1-207ENST00000398488 KCTD7Q96MP8 289 aa12.87□□□□□ -0.35
MBD1-207ENST00000398488 MEIKINA0A087WXM9 373 aa12.86□□□□□ -0.35
MBD1-207ENST00000398488 A0A0U1RQK1 487 aa12.86□□□□□ -0.35
MBD1-207ENST00000398488 FAM90A10PA6NDY2 464 aa12.86□□□□□ -0.35
MBD1-207ENST00000398488 FAM90A18PA6NE21 464 aa12.86□□□□□ -0.35
MBD1-207ENST00000398488 FAM90A16PA6NEW6 464 aa12.86□□□□□ -0.35
MBD1-207ENST00000398488 FAM90A20PA6NIJ5 464 aa12.86□□□□□ -0.35
MBD1-207ENST00000398488 FAM90A8PA6NJQ4 464 aa12.86□□□□□ -0.35
MBD1-207ENST00000398488 FAM90A7PA6NKC0 464 aa12.86□□□□□ -0.35
MBD1-207ENST00000398488 FAM90A22PA8MWA6 464 aa12.86□□□□□ -0.35
MBD1-207ENST00000398488 FAM90A12PA8MX19 464 aa12.86□□□□□ -0.35
MBD1-207ENST00000398488 FAM90A5PA8MXJ8 464 aa12.86□□□□□ -0.35
MBD1-207ENST00000398488 FAM90A23PA8MXZ1 464 aa12.86□□□□□ -0.35
MBD1-207ENST00000398488 AIPO00170 330 aa12.86□□□□□ -0.35
MBD1-207ENST00000398488 AIREO43918 545 aa12.86□□□□□ -0.35
MBD1-207ENST00000398488 MT-ND4P03905 459 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms