RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 HEXAP06865 529 aa5.02□□□□□ -1.61
PTPRD-206ENST00000397617 TNFSF4P23510 183 aa5.02□□□□□ -1.61
PTPRD-206ENST00000397617 COMPP49747 757 aaPredicted RBP5.02□□□□□ -1.61
PTPRD-206ENST00000397617 CCR6P51684 374 aa5.02□□□□□ -1.61
PTPRD-206ENST00000397617 IQCF2Q8IXL9 164 aa5.02□□□□□ -1.61
PTPRD-206ENST00000397617 NUP37Q8NFH4 326 aa5.02□□□□□ -1.61
PTPRD-206ENST00000397617 OR5D13Q8NGL4 314 aa5.02□□□□□ -1.61
PTPRD-206ENST00000397617 TNFRSF14Q92956 283 aa5.02□□□□□ -1.61
PTPRD-206ENST00000397617 C5orf66Q9H5L9 145 aa5.02□□□□□ -1.61
PTPRD-206ENST00000397617 OR6C3Q9NZP0 311 aa5.02□□□□□ -1.61
PTPRD-206ENST00000397617 STRAPQ9Y3F4 350 aaKnown RBP5.02□□□□□ -1.61
PTPRD-206ENST00000397617 FLNBO75369 2602 aaKnown RBP5.02□□□□□ -1.61
PTPRD-206ENST00000397617 A0A1B0GTH9 108 aa5.02□□□□□ -1.61
PTPRD-206ENST00000397617 FGF16O43320 207 aa5.02□□□□□ -1.61
PTPRD-206ENST00000397617 IFNA2P01563 188 aa5.02□□□□□ -1.61
PTPRD-206ENST00000397617 CELA2AP08217 269 aa5.02□□□□□ -1.61
PTPRD-206ENST00000397617 PAX6P26367 422 aa5.02□□□□□ -1.61
PTPRD-206ENST00000397617 NKX6-1P78426 367 aaPredicted RBP5.02□□□□□ -1.61
PTPRD-206ENST00000397617 CARTPTQ16568 116 aa5.02□□□□□ -1.61
PTPRD-206ENST00000397617 NKAPLQ5M9Q1 402 aa5.02□□□□□ -1.61
PTPRD-206ENST00000397617 NUDCD2Q8WVJ2 157 aa5.02□□□□□ -1.61
PTPRD-206ENST00000397617 HPSE2Q8WWQ2 592 aa5.02□□□□□ -1.61
PTPRD-206ENST00000397617 EXTL1Q92935 676 aa5.02□□□□□ -1.61
PTPRD-206ENST00000397617 PSMG3Q9BT73 122 aaPredicted RBP5.02□□□□□ -1.61
PTPRD-206ENST00000397617 TINAGL1Q9GZM7 467 aaPredicted RBP5.02□□□□□ -1.61
PTPRD-206ENST00000397617 ARL6Q9H0F7 186 aa5.02□□□□□ -1.61
PTPRD-206ENST00000397617 PLEKHF2Q9H8W4 249 aa5.02□□□□□ -1.61
PTPRD-206ENST00000397617 Q9N2K0 584 aa5.02□□□□□ -1.61
PTPRD-206ENST00000397617 A0A1W2PPK0 400 aa5.02□□□□□ -1.61
PTPRD-206ENST00000397617 SPEM2Q0P670 501 aa5.02□□□□□ -1.61
PTPRD-206ENST00000397617 AANATQ16613 207 aa5.02□□□□□ -1.61
PTPRD-206ENST00000397617 SPINK14Q6IE38 97 aa5.02□□□□□ -1.61
PTPRD-206ENST00000397617 HSD17B10Q99714 261 aaKnown RBP5.02□□□□□ -1.61
PTPRD-206ENST00000397617 EHFQ9NZC4 300 aa5.02□□□□□ -1.61
PTPRD-206ENST00000397617 R4GN57 208 aa5.02□□□□□ -1.61
PTPRD-206ENST00000397617 UNC79Q9P2D8 2635 aa5.02□□□□□ -1.61
PTPRD-206ENST00000397617 TMEM30CPA0ZSE6 113 aa5.02□□□□□ -1.61
PTPRD-206ENST00000397617 OR2AT4A6NND4 320 aa5.02□□□□□ -1.61
PTPRD-206ENST00000397617 INS-IGF2F8WCM5 200 aa5.02□□□□□ -1.61
PTPRD-206ENST00000397617 MPDU1O75352 247 aa5.02□□□□□ -1.61
PTPRD-206ENST00000397617 MED6O75586 246 aa5.02□□□□□ -1.61
PTPRD-206ENST00000397617 CGAP01215 116 aa5.02□□□□□ -1.61
PTPRD-206ENST00000397617 ATF4P18848 351 aaPredicted RBP5.02□□□□□ -1.61
PTPRD-206ENST00000397617 VAMP1P23763 118 aa5.02□□□□□ -1.61
PTPRD-206ENST00000397617 ID3Q02535 119 aa5.02□□□□□ -1.61
PTPRD-206ENST00000397617 MEF2CQ06413 473 aaPredicted RBP5.02□□□□□ -1.61
PTPRD-206ENST00000397617 SNTB1Q13884 538 aaKnown RBP5.02□□□□□ -1.61
PTPRD-206ENST00000397617 SFRP4Q6FHJ7 346 aaPredicted RBP5.02□□□□□ -1.61
PTPRD-206ENST00000397617 FOXRED2Q8IWF2 684 aa5.02□□□□□ -1.61
PTPRD-206ENST00000397617 BVESQ8NE79 360 aa5.02□□□□□ -1.61
PTPRD-206ENST00000397617 OR52E5Q8NH55 327 aa5.02□□□□□ -1.61
PTPRD-206ENST00000397617 ENY2Q9NPA8 101 aa5.02□□□□□ -1.61
PTPRD-206ENST00000397617 KLK13Q9UKR3 277 aa5.02□□□□□ -1.61
PTPRD-206ENST00000397617 NMBP08949 121 aa5.02□□□□□ -1.61
PTPRD-206ENST00000397617 VSIG10L2P0DP72 767 aa5.02□□□□□ -1.61
PTPRD-206ENST00000397617 MYF5P13349 255 aa5.02□□□□□ -1.61
PTPRD-206ENST00000397617 SERF2P84101 59 aa5.02□□□□□ -1.61
PTPRD-206ENST00000397617 PPP1R1AQ13522 171 aa5.02□□□□□ -1.61
PTPRD-206ENST00000397617 ATP6V1FQ16864 119 aa5.02□□□□□ -1.61
PTPRD-206ENST00000397617 DHRS7BQ6IAN0 325 aaPredicted RBP5.02□□□□□ -1.61
PTPRD-206ENST00000397617 NINJ1Q92982 152 aa5.02□□□□□ -1.61
PTPRD-206ENST00000397617 JSRP1Q96MG2 331 aaPredicted RBP5.02□□□□□ -1.61
PTPRD-206ENST00000397617 TMEM68Q96MH6 324 aa5.02□□□□□ -1.61
PTPRD-206ENST00000397617 GGACTQ9BVM4 153 aa5.02□□□□□ -1.61
PTPRD-206ENST00000397617 TAS2R3Q9NYW6 316 aa5.02□□□□□ -1.61
PTPRD-206ENST00000397617 CXCL3P19876 107 aa5.02□□□□□ -1.61
PTPRD-206ENST00000397617 P2RY1P47900 373 aa5.02□□□□□ -1.61
PTPRD-206ENST00000397617 RAB7AP51149 207 aa5.02□□□□□ -1.61
PTPRD-206ENST00000397617 PRSS12P56730 875 aa5.02□□□□□ -1.61
PTPRD-206ENST00000397617 ARSJQ5FYB0 599 aaPredicted RBP5.02□□□□□ -1.61
PTPRD-206ENST00000397617 NLRC3Q7RTR2 1065 aa5.02□□□□□ -1.61
PTPRD-206ENST00000397617 OR10AD1Q8NGE0 317 aa5.02□□□□□ -1.61
PTPRD-206ENST00000397617 LYZL4Q96KX0 146 aa5.02□□□□□ -1.61
PTPRD-206ENST00000397617 MRPL37Q9BZE1 423 aaKnown RBP5.02□□□□□ -1.61
PTPRD-206ENST00000397617 ARL2-SNX15V9GYD0 113 aa5.02□□□□□ -1.61
PTPRD-206ENST00000397617 A8MXK9 166 aa5.01□□□□□ -1.61
PTPRD-206ENST00000397617 SH2D1BO14796 132 aa5.01□□□□□ -1.61
PTPRD-206ENST00000397617 HLA-HP01893 362 aa5.01□□□□□ -1.61
PTPRD-206ENST00000397617 AGAP20933 346 aa5.01□□□□□ -1.61
PTPRD-206ENST00000397617 F2RP25116 425 aa5.01□□□□□ -1.61
PTPRD-206ENST00000397617 H2BFSP57053 126 aa5.01□□□□□ -1.61
PTPRD-206ENST00000397617 TMEM108Q6UXF1 575 aa5.01□□□□□ -1.61
PTPRD-206ENST00000397617 LILRB2Q8N423 598 aa5.01□□□□□ -1.61
PTPRD-206ENST00000397617 PPP1R1CQ8WVI7 109 aa5.01□□□□□ -1.61
PTPRD-206ENST00000397617 MLXQ9UH92 298 aa5.01□□□□□ -1.61
PTPRD-206ENST00000397617 ST8SIA5O15466 376 aa5.01□□□□□ -1.61
PTPRD-206ENST00000397617 DUSP1P28562 367 aa5.01□□□□□ -1.61
PTPRD-206ENST00000397617 GCH1P30793 250 aa5.01□□□□□ -1.61
PTPRD-206ENST00000397617 AKR1D1P51857 326 aa5.01□□□□□ -1.61
PTPRD-206ENST00000397617 HLA-DRB3P79483 266 aa5.01□□□□□ -1.61
PTPRD-206ENST00000397617 TAF9Q16594 264 aa5.01□□□□□ -1.61
PTPRD-206ENST00000397617 ABCA11PQ4W5N1 156 aa5.01□□□□□ -1.61
PTPRD-206ENST00000397617 FDCSPQ8NFU4 85 aa5.01□□□□□ -1.61
PTPRD-206ENST00000397617 RBPMSQ93062 196 aaKnown RBP5.01□□□□□ -1.61
PTPRD-206ENST00000397617 EGLN1Q9GZT9 426 aa5.01□□□□□ -1.61
PTPRD-206ENST00000397617 CXXC4Q9H2H0 198 aa5.01□□□□□ -1.61
PTPRD-206ENST00000397617 DOPEY2Q9Y3R5 2298 aa5.01□□□□□ -1.61
PTPRD-206ENST00000397617 MBPP02686 304 aaPredicted RBP5.01□□□□□ -1.61
PTPRD-206ENST00000397617 EDN3P14138 238 aa5.01□□□□□ -1.61
PTPRD-206ENST00000397617 UCP2P55851 309 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms