RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 DLK2Q6UY11 383 aa9.21□□□□□ -0.94
COL4A4-201ENST00000396625 LINC00469Q8N7U9 141 aa9.21□□□□□ -0.94
COL4A4-201ENST00000396625 FADS6Q8N9I5 356 aa9.21□□□□□ -0.94
COL4A4-201ENST00000396625 SIGLEC11Q96RL6 698 aa9.21□□□□□ -0.94
COL4A4-201ENST00000396625 MRPL16Q9NX20 251 aaKnown RBP9.21□□□□□ -0.94
COL4A4-201ENST00000396625 UQCR10Q9UDW1 63 aa9.21□□□□□ -0.94
COL4A4-201ENST00000396625 SIT1Q9Y3P8 196 aa9.21□□□□□ -0.94
COL4A4-201ENST00000396625 TRAV39A0A0B4J263 110 aa9.21□□□□□ -0.94
COL4A4-201ENST00000396625 RRN3P1Q2M238 152 aa9.21□□□□□ -0.94
COL4A4-201ENST00000396625 ORAI1Q96D31 301 aa9.21□□□□□ -0.94
COL4A4-201ENST00000396625 CITED2Q99967 270 aaPredicted RBP9.21□□□□□ -0.94
COL4A4-201ENST00000396625 RER1O15258 196 aa9.2□□□□□ -0.94
COL4A4-201ENST00000396625 HIST1H1DP16402 221 aaKnown RBP9.2□□□□□ -0.94
COL4A4-201ENST00000396625 MFRPQ9BY79 579 aa9.2□□□□□ -0.94
COL4A4-201ENST00000396625 NRAPQ86VF7 1730 aa9.2□□□□□ -0.94
COL4A4-201ENST00000396625 PSME4Q14997 1843 aa9.2□□□□□ -0.94
COL4A4-201ENST00000396625 A0A1B0GV90 55 aa9.2□□□□□ -0.94
COL4A4-201ENST00000396625 H3BQ15 152 aa9.2□□□□□ -0.94
COL4A4-201ENST00000396625 LGALS3P17931 250 aaKnown RBP9.2□□□□□ -0.94
COL4A4-201ENST00000396625 GCSAMLQ5JQS6 135 aa9.2□□□□□ -0.94
COL4A4-201ENST00000396625 C20orf196Q8IYI0 205 aa9.2□□□□□ -0.94
COL4A4-201ENST00000396625 OR4P4Q8NGL7 312 aa9.2□□□□□ -0.94
COL4A4-201ENST00000396625 C16orf52Q8NHV5 167 aa9.2□□□□□ -0.94
COL4A4-201ENST00000396625 MS4A6EQ96DS6 147 aa9.2□□□□□ -0.94
COL4A4-201ENST00000396625 VAX2Q9UIW0 290 aa9.2□□□□□ -0.94
COL4A4-201ENST00000396625 ARHGAP32A7KAX9 2087 aa9.2□□□□□ -0.94
COL4A4-201ENST00000396625 RAG2P55895 527 aa9.2□□□□□ -0.94
COL4A4-201ENST00000396625 PRNTQ86SH4 94 aa9.2□□□□□ -0.94
COL4A4-201ENST00000396625 GABRG3Q99928 467 aa9.2□□□□□ -0.94
COL4A4-201ENST00000396625 PGPEP1Q9NXJ5 209 aa9.2□□□□□ -0.94
COL4A4-201ENST00000396625 TCFL5Q9UL49 500 aa9.2□□□□□ -0.94
COL4A4-201ENST00000396625 FAM157CP0CG43 387 aa9.2□□□□□ -0.94
COL4A4-201ENST00000396625 METRNLQ641Q3 311 aa9.2□□□□□ -0.94
COL4A4-201ENST00000396625 RHBDD2Q6NTF9 364 aa9.2□□□□□ -0.94
COL4A4-201ENST00000396625 Q7L0L9 218 aa9.2□□□□□ -0.94
COL4A4-201ENST00000396625 SLC35E3Q7Z769 313 aa9.2□□□□□ -0.94
COL4A4-201ENST00000396625 NEURL2Q9BR09 285 aa9.2□□□□□ -0.94
COL4A4-201ENST00000396625 CCL26Q9Y258 94 aa9.2□□□□□ -0.94
COL4A4-201ENST00000396625 PPIL1Q9Y3C6 166 aa9.2□□□□□ -0.94
COL4A4-201ENST00000396625 ARHGAP21Q5T5U3 1957 aa9.2□□□□□ -0.94
COL4A4-201ENST00000396625 ROS1P08922 2347 aa9.2□□□□□ -0.94
COL4A4-201ENST00000396625 A0A1W2PR48 441 aa9.2□□□□□ -0.94
COL4A4-201ENST00000396625 TMEM202A6NGA9 273 aa9.2□□□□□ -0.94
COL4A4-201ENST00000396625 CTAG2O75638 210 aa9.2□□□□□ -0.94
COL4A4-201ENST00000396625 SFT2D2O95562 160 aa9.2□□□□□ -0.94
COL4A4-201ENST00000396625 CA6P23280 308 aa9.2□□□□□ -0.94
COL4A4-201ENST00000396625 KISS1Q15726 138 aa9.2□□□□□ -0.94
COL4A4-201ENST00000396625 TNXAQ16473 311 aa9.2□□□□□ -0.94
COL4A4-201ENST00000396625 MT-CO3P00414 261 aa9.2□□□□□ -0.94
COL4A4-201ENST00000396625 ARF6P62330 175 aa9.2□□□□□ -0.94
COL4A4-201ENST00000396625 CA13Q8N1Q1 262 aa9.2□□□□□ -0.94
COL4A4-201ENST00000396625 MORN4Q8NDC4 146 aa9.2□□□□□ -0.94
COL4A4-201ENST00000396625 OR13G1Q8NGZ3 307 aa9.2□□□□□ -0.94
COL4A4-201ENST00000396625 LHFPL5Q8TAF8 219 aa9.2□□□□□ -0.94
COL4A4-201ENST00000396625 PCOLCE2Q9UKZ9 415 aa9.2□□□□□ -0.94
COL4A4-201ENST00000396625 FREM1Q5H8C1 2179 aa9.2□□□□□ -0.94
COL4A4-201ENST00000396625 RBFOX2O43251 390 aaKnown RBP eCLIP9.2□□□□□ -0.94
COL4A4-201ENST00000396625 NAT2P11245 290 aa9.2□□□□□ -0.94
COL4A4-201ENST00000396625 YBX1P67809 324 aaKnown RBP9.2□□□□□ -0.94
COL4A4-201ENST00000396625 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.2□□□□□ -0.94
COL4A4-201ENST00000396625 TMEM179BQ7Z7N9 219 aa9.2□□□□□ -0.94
COL4A4-201ENST00000396625 OR4B1Q8NGF8 309 aa9.2□□□□□ -0.94
COL4A4-201ENST00000396625 CDC14BO60729 498 aa9.19□□□□□ -0.94
COL4A4-201ENST00000396625 GNG3P63215 75 aa9.19□□□□□ -0.94
COL4A4-201ENST00000396625 OTOSQ8NHW6 89 aa9.19□□□□□ -0.94
COL4A4-201ENST00000396625 FAM157AC9JC47 383 aa9.19□□□□□ -0.94
COL4A4-201ENST00000396625 DHRS3O75911 302 aa9.19□□□□□ -0.94
COL4A4-201ENST00000396625 ID1P41134 155 aa9.19□□□□□ -0.94
COL4A4-201ENST00000396625 PNLIPRP2P54317 469 aa9.19□□□□□ -0.94
COL4A4-201ENST00000396625 TMEM183AQ8IXX5 376 aa9.19□□□□□ -0.94
COL4A4-201ENST00000396625 SAP30LQ9HAJ7 183 aa9.19□□□□□ -0.94
COL4A4-201ENST00000396625 ASCL3Q9NQ33 180 aa9.19□□□□□ -0.94
COL4A4-201ENST00000396625 HDGFL3Q9Y3E1 203 aa9.19□□□□□ -0.94
COL4A4-201ENST00000396625 DLEC1Q9Y238 1755 aa9.19□□□□□ -0.94
COL4A4-201ENST00000396625 NGFP01138 241 aa9.19□□□□□ -0.94
COL4A4-201ENST00000396625 CRHP06850 196 aa9.19□□□□□ -0.94
COL4A4-201ENST00000396625 ZNF385CQ66K41 422 aaPredicted RBP9.19□□□□□ -0.94
COL4A4-201ENST00000396625 HSPB9Q9BQS6 159 aa9.19□□□□□ -0.94
COL4A4-201ENST00000396625 DAPP1Q9UN19 280 aa9.19□□□□□ -0.94
COL4A4-201ENST00000396625 TANC2Q9HCD6 1990 aa9.19□□□□□ -0.94
COL4A4-201ENST00000396625 PPP1R17O96001 155 aa9.19□□□□□ -0.94
COL4A4-201ENST00000396625 CDX1P47902 265 aaPredicted RBP9.19□□□□□ -0.94
COL4A4-201ENST00000396625 SYT11Q9BT88 431 aa9.19□□□□□ -0.94
COL4A4-201ENST00000396625 TNFRSF19Q9NS68 423 aa9.19□□□□□ -0.94
COL4A4-201ENST00000396625 CES1P1Q9UKY3 287 aa9.19□□□□□ -0.94
COL4A4-201ENST00000396625 GNG7O60262 68 aa9.19□□□□□ -0.94
COL4A4-201ENST00000396625 TMEM255AQ5JRV8 349 aa9.19□□□□□ -0.94
COL4A4-201ENST00000396625 CLEC18BQ6UXF7 455 aa9.19□□□□□ -0.94
COL4A4-201ENST00000396625 K7ESM1 405 aa9.19□□□□□ -0.94
COL4A4-201ENST00000396625 CD74P04233 296 aa9.19□□□□□ -0.94
COL4A4-201ENST00000396625 ZNF865P0CJ78 1059 aaPredicted RBP9.19□□□□□ -0.94
COL4A4-201ENST00000396625 CTF1Q16619 201 aa9.19□□□□□ -0.94
COL4A4-201ENST00000396625 PRSS54Q6PEW0 395 aa9.19□□□□□ -0.94
COL4A4-201ENST00000396625 WDFY1Q8IWB7 410 aa9.19□□□□□ -0.94
COL4A4-201ENST00000396625 SARAFQ96BY9 339 aa9.19□□□□□ -0.94
COL4A4-201ENST00000396625 FIZ1Q96SL8 496 aa9.19□□□□□ -0.94
COL4A4-201ENST00000396625 DDA1Q9BW61 102 aa9.19□□□□□ -0.94
COL4A4-201ENST00000396625 SPSB1Q96BD6 273 aa9.19□□□□□ -0.94
COL4A4-201ENST00000396625 DNAJC25-GNG10A0A024R161 153 aa9.19□□□□□ -0.94
COL4A4-201ENST00000396625 FRG2CA6NGY1 282 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms