RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 R3HDM4Q96D70 268 aa13.12□□□□□ -0.31
CLTA-203ENST00000396603 OR5M11Q96RB7 305 aa13.12□□□□□ -0.31
CLTA-203ENST00000396603 MGLLQ99685 303 aa13.12□□□□□ -0.31
CLTA-203ENST00000396603 RHOFQ9HBH0 211 aa13.12□□□□□ -0.31
CLTA-203ENST00000396603 TMEM138Q9NPI0 162 aa13.12□□□□□ -0.31
CLTA-203ENST00000396603 IGKV1-9A0A0C4DH69 117 aa13.11□□□□□ -0.31
CLTA-203ENST00000396603 ADARB2-AS1A8MUL3 147 aa13.11□□□□□ -0.31
CLTA-203ENST00000396603 FAM90A22PA8MWA6 464 aa13.11□□□□□ -0.31
CLTA-203ENST00000396603 F2RL2O00254 374 aa13.11□□□□□ -0.31
CLTA-203ENST00000396603 PAX6P26367 422 aa13.11□□□□□ -0.31
CLTA-203ENST00000396603 ERP29P30040 261 aaKnown RBP13.11□□□□□ -0.31
CLTA-203ENST00000396603 EDDM3BP56851 147 aa13.11□□□□□ -0.31
CLTA-203ENST00000396603 TPBGQ13641 420 aa13.11□□□□□ -0.31
CLTA-203ENST00000396603 NSUN5P1Q3KNT7 163 aa13.11□□□□□ -0.31
CLTA-203ENST00000396603 ZNF773Q6PK81 442 aa13.11□□□□□ -0.31
CLTA-203ENST00000396603 ANGPTL5Q86XS5 388 aa13.11□□□□□ -0.31
CLTA-203ENST00000396603 AKR1E2Q96JD6 320 aa13.11□□□□□ -0.31
CLTA-203ENST00000396603 MMP28Q9H239 520 aa13.11□□□□□ -0.31
CLTA-203ENST00000396603 ACOT13Q9NPJ3 140 aa13.11□□□□□ -0.31
CLTA-203ENST00000396603 MTCH1Q9NZJ7 389 aa13.11□□□□□ -0.31
CLTA-203ENST00000396603 SESN1Q9Y6P5 492 aa13.11□□□□□ -0.31
CLTA-203ENST00000396603 GPX5O75715 221 aa13.1□□□□□ -0.31
CLTA-203ENST00000396603 TNFAIP8O95379 198 aa13.1□□□□□ -0.31
CLTA-203ENST00000396603 CPEP16870 476 aa13.1□□□□□ -0.31
CLTA-203ENST00000396603 FSTP19883 344 aa13.1□□□□□ -0.31
CLTA-203ENST00000396603 BDKRB2P30411 391 aa13.1□□□□□ -0.31
CLTA-203ENST00000396603 VDAC2P45880 294 aaPredicted RBP13.1□□□□□ -0.31
CLTA-203ENST00000396603 MAP2K4P45985 399 aa13.1□□□□□ -0.31
CLTA-203ENST00000396603 POU3F4P49335 361 aa13.1□□□□□ -0.31
CLTA-203ENST00000396603 RPS11P62280 158 aaKnown RBP eCLIP13.1□□□□□ -0.31
CLTA-203ENST00000396603 SPIN3Q5JUX0 258 aa13.1□□□□□ -0.31
CLTA-203ENST00000396603 LDLRAD2Q5SZI1 272 aa13.1□□□□□ -0.31
CLTA-203ENST00000396603 LIPKQ5VXJ0 399 aa13.1□□□□□ -0.31
CLTA-203ENST00000396603 ZNF529Q6P280 563 aa13.1□□□□□ -0.31
CLTA-203ENST00000396603 SLC25A26Q70HW3 274 aa13.1□□□□□ -0.31
CLTA-203ENST00000396603 SAXO1Q8IYX7 474 aa13.1□□□□□ -0.31
CLTA-203ENST00000396603 MRAPQ8TCY5 172 aa13.1□□□□□ -0.31
CLTA-203ENST00000396603 PHYHIPQ92561 330 aa13.1□□□□□ -0.31
CLTA-203ENST00000396603 OR14A2Q96R54 314 aa13.1□□□□□ -0.31
CLTA-203ENST00000396603 GPER1Q99527 375 aa13.1□□□□□ -0.31
CLTA-203ENST00000396603 CITED2Q99967 270 aaPredicted RBP13.1□□□□□ -0.31
CLTA-203ENST00000396603 TMED9Q9BVK6 235 aa13.1□□□□□ -0.31
CLTA-203ENST00000396603 VCX3AQ9NNX9 186 aa13.1□□□□□ -0.31
CLTA-203ENST00000396603 TAS2R4Q9NYW5 299 aa13.1□□□□□ -0.31
CLTA-203ENST00000396603 GLS2Q9UI32 602 aa13.1□□□□□ -0.31
CLTA-203ENST00000396603 IGKV1-27A0A075B6S5 117 aa13.09□□□□□ -0.31
CLTA-203ENST00000396603 TRBV5-7A0A0A0MS05 114 aa13.09□□□□□ -0.31
CLTA-203ENST00000396603 IGHV2-26A0A0B4J1V2 119 aa13.09□□□□□ -0.31
CLTA-203ENST00000396603 RAB13P51153 203 aa13.09□□□□□ -0.31
CLTA-203ENST00000396603 ARHGDIBP52566 201 aa13.09□□□□□ -0.31
CLTA-203ENST00000396603 CD83Q01151 205 aa13.09□□□□□ -0.31
CLTA-203ENST00000396603 PDZK1IP1Q13113 114 aa13.09□□□□□ -0.31
CLTA-203ENST00000396603 DYNC1I2Q13409 638 aaKnown RBP13.09□□□□□ -0.31
CLTA-203ENST00000396603 DOC2BQ14184 412 aa13.09□□□□□ -0.31
CLTA-203ENST00000396603 HABP2Q14520 560 aaPredicted RBP13.09□□□□□ -0.31
CLTA-203ENST00000396603 ZNF146Q15072 292 aa13.09□□□□□ -0.31
CLTA-203ENST00000396603 KISS1Q15726 138 aa13.09□□□□□ -0.31
CLTA-203ENST00000396603 ACSM3Q53FZ2 586 aa13.09□□□□□ -0.31
CLTA-203ENST00000396603 OXLD1Q5BKU9 147 aa13.09□□□□□ -0.31
CLTA-203ENST00000396603 OR52W1Q6IF63 320 aa13.09□□□□□ -0.31
CLTA-203ENST00000396603 TCF23Q7RTU1 214 aa13.09□□□□□ -0.31
CLTA-203ENST00000396603 RTN4RL2Q86UN3 420 aa13.09□□□□□ -0.31
CLTA-203ENST00000396603 TMEM219Q86XT9 240 aa13.09□□□□□ -0.31
CLTA-203ENST00000396603 CDH26Q8IXH8 852 aa13.09□□□□□ -0.31
CLTA-203ENST00000396603 SPARTQ8N0X7 666 aa13.09□□□□□ -0.31
CLTA-203ENST00000396603 NKAIN3Q8N8D7 197 aa13.09□□□□□ -0.31
CLTA-203ENST00000396603 OR13C5Q8NGS8 318 aa13.09□□□□□ -0.31
CLTA-203ENST00000396603 PHF21AQ96BD5 680 aa13.09□□□□□ -0.31
CLTA-203ENST00000396603 DERL3Q96Q80 235 aa13.09□□□□□ -0.31
CLTA-203ENST00000396603 OCSTAMPQ9BR26 566 aa13.09□□□□□ -0.31
CLTA-203ENST00000396603 CLEC7AQ9BXN2 247 aa13.09□□□□□ -0.31
CLTA-203ENST00000396603 TMEM133Q9H2Q1 129 aa13.09□□□□□ -0.31
CLTA-203ENST00000396603 LIN7BQ9HAP6 207 aa13.09□□□□□ -0.31
CLTA-203ENST00000396603 PCDHB16Q9NRJ7 776 aa13.09□□□□□ -0.31
CLTA-203ENST00000396603 UBE2J1Q9Y385 318 aaPredicted RBP13.09□□□□□ -0.31
CLTA-203ENST00000396603 TMEM82A0PJX8 343 aa13.08□□□□□ -0.32
CLTA-203ENST00000396603 MGST3O14880 152 aa13.08□□□□□ -0.32
CLTA-203ENST00000396603 HAND1O96004 215 aa13.08□□□□□ -0.32
CLTA-203ENST00000396603 TMEM225BP0DP42 221 aa13.08□□□□□ -0.32
CLTA-203ENST00000396603 HTR1DP28221 377 aa13.08□□□□□ -0.32
CLTA-203ENST00000396603 RANBP1P43487 201 aa13.08□□□□□ -0.32
CLTA-203ENST00000396603 PLA1AQ53H76 456 aa13.08□□□□□ -0.32
CLTA-203ENST00000396603 ARSJQ5FYB0 599 aaPredicted RBP13.08□□□□□ -0.32
CLTA-203ENST00000396603 DDI2Q5TDH0 399 aa13.08□□□□□ -0.32
CLTA-203ENST00000396603 SATL1Q86VE3 508 aa13.08□□□□□ -0.32
CLTA-203ENST00000396603 CREB3L1Q96BA8 519 aa13.08□□□□□ -0.32
CLTA-203ENST00000396603 S100A13Q99584 98 aa13.08□□□□□ -0.32
CLTA-203ENST00000396603 AURKAIP1Q9NWT8 199 aaPredicted RBP13.08□□□□□ -0.32
CLTA-203ENST00000396603 FUOMA2VDF0 154 aa13.07□□□□□ -0.32
CLTA-203ENST00000396603 ARL6IP5O75915 188 aa13.07□□□□□ -0.32
CLTA-203ENST00000396603 DUS4LO95620 317 aaKnown RBP13.07□□□□□ -0.32
CLTA-203ENST00000396603 IGFBP3P17936 291 aaPredicted RBP13.07□□□□□ -0.32
CLTA-203ENST00000396603 BRS3P32247 399 aa13.07□□□□□ -0.32
CLTA-203ENST00000396603 ZNF93P35789 620 aaPredicted RBP13.07□□□□□ -0.32
CLTA-203ENST00000396603 BLCAPP62952 87 aa13.07□□□□□ -0.32
CLTA-203ENST00000396603 GRK1Q15835 563 aa13.07□□□□□ -0.32
CLTA-203ENST00000396603 UBE2UQ5VVX9 321 aa13.07□□□□□ -0.32
CLTA-203ENST00000396603 PXT1Q8NFP0 134 aa13.07□□□□□ -0.32
CLTA-203ENST00000396603 NDNFQ8TB73 568 aa13.07□□□□□ -0.32
CLTA-203ENST00000396603 ZNF596Q8TC21 504 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms